; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009869 (gene) of Chayote v1 genome

Gene IDSed0009869
OrganismSechium edule (Chayote v1)
DescriptionRNase H domain-containing protein
Genome locationLG06:33732964..33736427
RNA-Seq ExpressionSed0009869
SyntenySed0009869
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4383359.1 hypothetical protein G4B88_023933 [Cannabis sativa]2.0e-2626.09Show/hide
Query:  FTIPSIDH--SKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKL----
        FT+P+     +++ +  L   +G W  +++ S +   DV  +L +   K E  D+  W  T +G ++V S YKL   D   A  S +     WWK     
Subjt:  FTIPSIDH--SKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKL----

Query:  ----------------------IFRRSLSFL-DGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSK
                               F  SL    D L+ +  ++SK  F       W IW  RNK +   K     I I W    L E   ++  K      
Subjt:  ----------------------IFRRSLSFL-DGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSK

Query:  IFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLS
              W +P LG   +N DAS   G+ G G+G ++RD+LG  + A+  ++P  L+ + AE LA+   LKL   + +  + I SDS+ ++  +     ++
Subjt:  IFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLS

Query:  SSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLDGPAG
        + +G+++ +     ++ + +  I IPR+ NN AH +A W+     S  W  + P      L  D P G
Subjt:  SSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLDGPAG

KAG8363091.1 hypothetical protein BUALT_BualtUnG0005200 [Buddleja alternifolia]4.5e-2625.43Show/hide
Query:  PLIIGQFVYPLMDNV---RGPPRFHFEEFWADDKECQEIVKQMWGLEANAINGLDVSLEQRKERFWGWGRRKKVEKWRTINRLRLLIKEEFARREPSFRL
        P++I     P +D+V   RG   F FE +W    EC +++++ W   +++ +     + Q  E    W  R     ++ I    LL         P   +
Subjt:  PLIIGQFVYPLMDNV---RGPPRFHFEEFWADDKECQEIVKQMWGLEANAINGLDVSLEQRKERFWGWGRRKKVEKWRTINRLRLLIKEEFARREPSFRL

Query:  FTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFRRSL
        FT+  + HS++           WN + ++++ WP D   IL++P+ +    DS IWHY+K+G+FSV+SAY +    + E  PS S      W+ I+   L
Subjt:  FTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFRRSL

Query:  SFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVG
                            I V  W             +VS   I                               W  P+   +KLN D +    + G
Subjt:  SFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVG

Query:  VGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREE
        +GVG + R++ G C+A    F P + N   AEAL     L+L  +KG   + IE D  ++++ +  P    SS   L+++I+ L  S S I    + R  
Subjt:  VGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREE

Query:  NNTAHVIAR
        N  AH +AR
Subjt:  NNTAHVIAR

XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]2.4e-2724.14Show/hide
Query:  KEEFARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDI
        K+ +  R PSF   T  S +  K+V    +   G WN + ++      D+ +IL +P+ + +  DSW WHY   G ++V+S YKL+++   + S SS  +
Subjt:  KEEFARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDI

Query:  MDKWWK-----------LIF-------------------------------------------------------------RRSLSFLDGLIRLSDEVSK
        M KWWK           LIF                                                             +  +SF D L+ +++ + K
Subjt:  MDKWWK-----------LIF-------------------------------------------------------------RRSLSFLDGLIRLSDEVSK

Query:  PLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGF-LKLNVDASCTKGKVGVGVGAVVRDNLGKC
           +++ +T W IW +RNKL+  +K         W+  Y  E + +Y  + + +S+       +   + F   L VDA+ +K    +G+GA +  +  K 
Subjt:  PLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGF-LKLNVDASCTKGKVGVGVGAVVRDNLGKC

Query:  LAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNS
         A  +  L  IL+ + AEALAL+ GL+  +  G     + +DS+ LV  ++      +  G+L+A+ R L++    ++   + R  N  AH +AR A   
Subjt:  LAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNS

Query:  GFSLDW
           + W
Subjt:  GFSLDW

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]7.0e-2723.84Show/hide
Query:  VAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFR---------------
        VA   + DG W+V  +       D  +IL++PI      DSW+WHY K G +SVRS YKL  H    A+ +S++     W  I++               
Subjt:  VAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFR---------------

Query:  ----------------------------------------------------------RSLSFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADE
                                                                   ++SFL+    L++++      L ++T W IW DRN L+  +
Subjt:  ----------------------------------------------------------RSLSFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADE

Query:  KVSGVDIRINWIRNYLGEFQ---------KSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIK
        +VS V+ +  W+  +L             ++  + + VV        W   +   LKLN DA+C         G ++RD+    +AA++  +P  L+P+ 
Subjt:  KVSGVDIRINWIRNYLGEFQ---------KSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIK

Query:  AEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNS-GFSLDWFLYFPPWLE
        AE   ++ GLK         + +ESDS L +  + +           + EI+ L    +FI      R+ N  AH +A+W   S   +  W   FP WL 
Subjt:  AEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNS-GFSLDWFLYFPPWLE

Query:  NLLVLDGPAGF
        +L+  D P+ F
Subjt:  NLLVLDGPAGF

XP_023897447.1 uncharacterized protein LOC112009345 [Quercus suber]5.5e-3227.65Show/hide
Query:  RLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKL---LSHDLPEASPSSSDIMDKWWKLI
        RLF  P    S+ +  E       W  + ++ I +P+D+ VIL +P+      D  IW  T +G FSVRSAY++   L       S SS+  +  +WK +
Subjt:  RLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKL---LSHDLPEASPSSSDIMDKWWKLI

Query:  FRRSLSFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCT
        +   +              +    L+    WA WC+RN++    +    +  + W+  YL E+  + +    V  ++  S  W  P    LK+NVD + T
Subjt:  FRRSLSFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCT

Query:  KGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIA
        K    VGVGAVVRD  G+ +AA +  +P  L P++ E  A   GL+L +  G   +++E DS ++V  +    + SS+   ++  ++        + +  
Subjt:  KGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIA

Query:  IPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLD
        + R+EN  AHV+A++A +   S+ W    P  ++ +L  D
Subjt:  IPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLD

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248743.4e-2723.84Show/hide
Query:  VAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFR---------------
        VA   + DG W+V  +       D  +IL++PI      DSW+WHY K G +SVRS YKL  H    A+ +S++     W  I++               
Subjt:  VAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFR---------------

Query:  ----------------------------------------------------------RSLSFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADE
                                                                   ++SFL+    L++++      L ++T W IW DRN L+  +
Subjt:  ----------------------------------------------------------RSLSFLDGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADE

Query:  KVSGVDIRINWIRNYLGEFQ---------KSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIK
        +VS V+ +  W+  +L             ++  + + VV        W   +   LKLN DA+C         G ++RD+    +AA++  +P  L+P+ 
Subjt:  KVSGVDIRINWIRNYLGEFQ---------KSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIK

Query:  AEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNS-GFSLDWFLYFPPWLE
        AE   ++ GLK         + +ESDS L +  + +           + EI+ L    +FI      R+ N  AH +A+W   S   +  W   FP WL 
Subjt:  AEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNS-GFSLDWFLYFPPWLE

Query:  NLLVLDGPAGF
        +L+  D P+ F
Subjt:  NLLVLDGPAGF

A0A7J6GMP0 RNase H domain-containing protein9.8e-2726.09Show/hide
Query:  FTIPSIDH--SKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKL----
        FT+P+     +++ +  L   +G W  +++ S +   DV  +L +   K E  D+  W  T +G ++V S YKL   D   A  S +     WWK     
Subjt:  FTIPSIDH--SKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKL----

Query:  ----------------------IFRRSLSFL-DGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSK
                               F  SL    D L+ +  ++SK  F       W IW  RNK +   K     I I W    L E   ++  K      
Subjt:  ----------------------IFRRSLSFL-DGLIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSK

Query:  IFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLS
              W +P LG   +N DAS   G+ G G+G ++RD+LG  + A+  ++P  L+ + AE LA+   LKL   + +  + I SDS+ ++  +     ++
Subjt:  IFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLS

Query:  SSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLDGPAG
        + +G+++ +     ++ + +  I IPR+ NN AH +A W+     S  W  + P      L  D P G
Subjt:  SSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLDGPAG

A0A803Q0L5 Uncharacterized protein2.9e-3127.48Show/hide
Query:  WGRRKKVE--KWRTINRLRLLIKEE-FARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVF
        WG++  V   +WR  N   + + E+ +  R  +F+++  P +  + +VVA++   DG W+   ++ +    D  +IL++P    E  D  +WHY+K+G +
Subjt:  WGRRKKVE--KWRTINRLRLLIKEE-FARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVF

Query:  SVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFRRSL-----------------------------------SFLDGLIRLSDE------------VSKPL
        +V+S YK+ S  + E   S+  ++  WWK ++R  +                                    F D + RL DE              K  
Subjt:  SVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFRRSL-----------------------------------SFLDGLIRLSDE------------VSKPL

Query:  FELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFR-SGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLA
        FE   V  W IW  RN ++           ++W R YL EF+         VS++ R + +W AP LG +K+NVDA    G    G+G V+RD+ G+ L 
Subjt:  FELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFR-SGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLA

Query:  ASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGF
        AS+  + Q L P++ E  A++ GL++   + +    IESD    V  +            LL +IR LL  DS   +  + RE N  A+V+A +A  +  
Subjt:  ASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGF

Query:  SLDW
        S  W
Subjt:  SLDW

A0A803QQT2 Uncharacterized protein8.0e-2924.44Show/hide
Query:  WGRR--KKVEKWRTINRLRLLIKEE-FARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVF
        WG++   K  +WR  N   + + E+ +  R  +F+++  PS+  + + V +L   DG W+   ++SI  P DV +IL +P    +  D  +WHY+K G +
Subjt:  WGRR--KKVEKWRTINRLRLLIKEE-FARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVF

Query:  SVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFR-------------------------------------RSLSFLDG----------------------
        SV+S Y++ +    E   S+   + +WWK ++R                                     R  S +D                       
Subjt:  SVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFR-------------------------------------RSLSFLDG----------------------

Query:  --------------LIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVD
                      L+R++ E  K   E   +  W IW  RN ++        +  I W  N+L +F+   D  ++   +     RW  P    + +NVD
Subjt:  --------------LIRLSDEVSKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVD

Query:  ASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFI
        A   +G +  G+G VVRD  G  L+A+A  L Q L P++ E +A+  G+++  ++ L    +E+D    V+ + +          LL  IR L+  DSF+
Subjt:  ASCTKGKVGVGVGAVVRDNLGKCLAASAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFI

Query:  ELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLDGP
         +  + RE N  AH +A +A     S  W    PP     ++ D P
Subjt:  ELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLVLDGP

M5VP36 Uncharacterized protein (Fragment)9.8e-2725.36Show/hide
Query:  LLIKEEFARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKL---LSHDLPEAS
        L+  + +  R  SFRL + P +   +  V++     G WNVD +       DV  I ++P+      D W+WHYT +G++SV+S Y+L      D   A 
Subjt:  LLIKEEFARREPSFRLFTIPSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKL---LSHDLPEAS

Query:  PSSSD--IMDKWWKLIF----------------RRSLSFLDGLI--RLSDEVSKP------------------------------------------LFE
         SSS+  + + +W+ ++                +  L     L+  ++  E S P                                          LFE
Subjt:  PSSSD--IMDKWWKLIF----------------RRSLSFLDGLI--RLSDEVSKP------------------------------------------LFE

Query:  LISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASA
        + ++   ++W +RNK + + +    D+  N   +  GE+    + + K+  +  +  +W  P  G  KLNVD +        G+GAVVR++ G+ +AA A
Subjt:  LISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASA

Query:  FFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWV-HDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSL
          L    +   AE +A +  +K     G   +LIESDS+  VN V  D     +S G L+ +I+R L+    + +   PR  N  AH +A+ A N    +
Subjt:  FFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWV-HDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSL

Query:  DWFLYFPPWLENLL
         W    P WLE+++
Subjt:  DWFLYFPPWLENLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)7.2e-0623.93Show/hide
Query:  WNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFRRSLSFLDGLIRLSDE---VSKPLFE
        W +D++++++ P+D+ +IL +   +T   D + W +TK G ++V+S Y  ++ DL  + P+          +  R SL +    +   D    + + + E
Subjt:  WNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFRRSLSFLDGLIRLSDE---VSKPLFE

Query:  LISVTFWAIWCDRNKLL
        L     W IW  +N+ +
Subjt:  LISVTFWAIWCDRNKLL

AT3G09510.1 Ribonuclease H-like superfamily protein1.9e-0630.21Show/hide
Query:  HSKIVVAELFSVDGG---WNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHD----LPEASP--SSSDIMDKWWKL
        + ++ +  LF   G    W+  K+   V   D G I  + + K+++ D  IW+Y   G ++VRS Y LL+HD    +P  +P   S D+  + W L
Subjt:  HSKIVVAELFSVDGG---WNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHD----LPEASP--SSSDIMDKWWKL

AT4G09775.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1)5.9e-0825Show/hide
Query:  WAIWCDRNKLLADE------KVS--GVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAA
        W +W  RN+ L  +      KV+  G      W+   + +   S+  ++       RS  W  P  G+LK N D+   +G+       ++RD+ G  + +
Subjt:  WAIWCDRNKLLADE------KVS--GVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAA

Query:  SAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDS
            L Q  + ++AEAL  +H L++V  +G   V  E ++
Subjt:  SAFFLPQILNPIKAEALALIHGLKLVEKKGLFGVLIESDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGGTTTCTCATTTGGACTGGTATGCCTCTGATCATAGGCCAATTTGTTTATCCATTGATGGATAATGTTCGTGGTCCTCCTCGATTTCACTTTGAGGAATTTTG
GGCAGATGACAAGGAGTGTCAGGAAATTGTTAAGCAGATGTGGGGGTTAGAGGCTAATGCAATTAATGGTTTAGACGTCTCGCTTGAGCAACGTAAAGAAAGGTTTTGGG
GGTGGGGTAGGAGGAAAAAGGTTGAGAAATGGAGGACTATTAACAGATTGAGGTTGCTTATTAAAGAAGAGTTTGCCAGAAGGGAGCCTTCGTTTCGACTATTCACCATT
CCCTCTATAGATCATTCAAAGATTGTGGTTGCTGAGCTATTTTCTGTCGATGGTGGGTGGAATGTAGATAAGGTTAAATCTATTGTTTGGCCTATGGATGTTGGTGTCAT
TCTAGCTGTGCCTATTTGTAAAACAGAGGAGGTTGATAGTTGGATTTGGCATTATACTAAGGATGGGGTGTTCTCAGTGAGAAGTGCGTACAAACTCTTATCTCATGATC
TTCCAGAAGCTTCCCCTTCGTCTTCTGATATTATGGATAAATGGTGGAAGTTGATCTTTCGACGGTCTTTATCCTTCTTGGATGGCCTAATTCGCTTGAGTGACGAGGTC
TCTAAGCCTTTGTTTGAGCTTATAAGCGTGACTTTCTGGGCAATTTGGTGTGATAGGAACAAACTATTAGCTGATGAGAAAGTGTCGGGAGTCGATATTCGTATAAATTG
GATTAGAAATTACCTGGGTGAATTCCAAAAATCCTATGATGATAAGAAGAAAGTTGTTTCGAAGATTTTTAGATCCGGAAGATGGGAGGCCCCGAACCTGGGATTCTTAA
AGCTCAATGTGGATGCTTCTTGTACTAAGGGTAAAGTTGGAGTTGGTGTAGGAGCGGTCGTCCGTGATAACCTGGGTAAATGTTTAGCGGCTTCAGCCTTTTTTCTTCCC
CAAATCCTTAATCCCATTAAGGCAGAAGCTCTAGCTCTTATTCATGGGTTGAAGCTGGTTGAGAAGAAAGGGTTGTTCGGAGTTTTGATTGAATCTGACTCTAAGTTGTT
GGTAAATTGGGTTCACGATCCTCATATGCTTTCTTCTTCTTTTGGAGTTCTTTTGGCTGAGATTCGTCGTTTGTTGGAAAGTGATAGCTTTATTGAGCTGATAGCTATCC
CTAGGGAGGAAAATAATACCGCCCATGTTATTGCCCGATGGGCTTGTAATTCAGGCTTTTCTTTAGACTGGTTTTTGTATTTCCCTCCTTGGCTGGAGAATTTGCTAGTC
CTTGATGGGCCTGCTGGTTTTGATCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTGGTTTCTCATTTGGACTGGTATGCCTCTGATCATAGGCCAATTTGTTTATCCATTGATGGATAATGTTCGTGGTCCTCCTCGATTTCACTTTGAGGAATTTTG
GGCAGATGACAAGGAGTGTCAGGAAATTGTTAAGCAGATGTGGGGGTTAGAGGCTAATGCAATTAATGGTTTAGACGTCTCGCTTGAGCAACGTAAAGAAAGGTTTTGGG
GGTGGGGTAGGAGGAAAAAGGTTGAGAAATGGAGGACTATTAACAGATTGAGGTTGCTTATTAAAGAAGAGTTTGCCAGAAGGGAGCCTTCGTTTCGACTATTCACCATT
CCCTCTATAGATCATTCAAAGATTGTGGTTGCTGAGCTATTTTCTGTCGATGGTGGGTGGAATGTAGATAAGGTTAAATCTATTGTTTGGCCTATGGATGTTGGTGTCAT
TCTAGCTGTGCCTATTTGTAAAACAGAGGAGGTTGATAGTTGGATTTGGCATTATACTAAGGATGGGGTGTTCTCAGTGAGAAGTGCGTACAAACTCTTATCTCATGATC
TTCCAGAAGCTTCCCCTTCGTCTTCTGATATTATGGATAAATGGTGGAAGTTGATCTTTCGACGGTCTTTATCCTTCTTGGATGGCCTAATTCGCTTGAGTGACGAGGTC
TCTAAGCCTTTGTTTGAGCTTATAAGCGTGACTTTCTGGGCAATTTGGTGTGATAGGAACAAACTATTAGCTGATGAGAAAGTGTCGGGAGTCGATATTCGTATAAATTG
GATTAGAAATTACCTGGGTGAATTCCAAAAATCCTATGATGATAAGAAGAAAGTTGTTTCGAAGATTTTTAGATCCGGAAGATGGGAGGCCCCGAACCTGGGATTCTTAA
AGCTCAATGTGGATGCTTCTTGTACTAAGGGTAAAGTTGGAGTTGGTGTAGGAGCGGTCGTCCGTGATAACCTGGGTAAATGTTTAGCGGCTTCAGCCTTTTTTCTTCCC
CAAATCCTTAATCCCATTAAGGCAGAAGCTCTAGCTCTTATTCATGGGTTGAAGCTGGTTGAGAAGAAAGGGTTGTTCGGAGTTTTGATTGAATCTGACTCTAAGTTGTT
GGTAAATTGGGTTCACGATCCTCATATGCTTTCTTCTTCTTTTGGAGTTCTTTTGGCTGAGATTCGTCGTTTGTTGGAAAGTGATAGCTTTATTGAGCTGATAGCTATCC
CTAGGGAGGAAAATAATACCGCCCATGTTATTGCCCGATGGGCTTGTAATTCAGGCTTTTCTTTAGACTGGTTTTTGTATTTCCCTCCTTGGCTGGAGAATTTGCTAGTC
CTTGATGGGCCTGCTGGTTTTGATCTATAA
Protein sequenceShow/hide protein sequence
MPWFLIWTGMPLIIGQFVYPLMDNVRGPPRFHFEEFWADDKECQEIVKQMWGLEANAINGLDVSLEQRKERFWGWGRRKKVEKWRTINRLRLLIKEEFARREPSFRLFTI
PSIDHSKIVVAELFSVDGGWNVDKVKSIVWPMDVGVILAVPICKTEEVDSWIWHYTKDGVFSVRSAYKLLSHDLPEASPSSSDIMDKWWKLIFRRSLSFLDGLIRLSDEV
SKPLFELISVTFWAIWCDRNKLLADEKVSGVDIRINWIRNYLGEFQKSYDDKKKVVSKIFRSGRWEAPNLGFLKLNVDASCTKGKVGVGVGAVVRDNLGKCLAASAFFLP
QILNPIKAEALALIHGLKLVEKKGLFGVLIESDSKLLVNWVHDPHMLSSSFGVLLAEIRRLLESDSFIELIAIPREENNTAHVIARWACNSGFSLDWFLYFPPWLENLLV
LDGPAGFDL