; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009872 (gene) of Chayote v1 genome

Gene IDSed0009872
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:3123459..3123890
RNA-Seq ExpressionSed0009872
SyntenySed0009872
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656615.1 uncharacterized protein LOC105435757 [Cucumis sativus]1.1e-6383.22Show/hide
Query:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA
        MAR+LQI+HSSQGTAQVGMAGVSLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATVVTTQR     VN+ EP+NGNDEMFFSREQQA+
Subjt:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
        +W KNILMGGKCQLP+FSG+ILYDPNGNAV P KT  PLLTWK
Subjt:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

XP_022959632.1 uncharacterized protein LOC111460648 [Cucurbita moschata]9.2e-6683.33Show/hide
Query:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA
        MAR+LQ +MHSSQ TAQVGMAG SLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATVVTTQRVN C+VN+PEP+NGNDEMFFSREQ+A
Subjt:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
        AVW+KNILMGGKCQLP+FSG+ILYD NGN V P +TQ PLLTWK
Subjt:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

XP_022990795.1 uncharacterized protein LOC111487577 [Cucurbita maxima]8.6e-6481.25Show/hide
Query:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA
        MAR+LQ +MHSSQ TAQVGMAG SLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATVVTTQRVN C+VN+ EP+N NDEMFFSREQ+A
Subjt:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
         VW+KNILMGGKCQLP+FSG+ILYD NGN V P +TQ PLLTWK
Subjt:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

XP_023512486.1 uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo]7.8e-6582.64Show/hide
Query:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA
        MAR+LQ +MHSSQ TAQVGMAG SLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATVVTTQRVN C+VN+ EP+NGNDEMFFSREQ+A
Subjt:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
        AVW+KNILMGGKCQLP+FSG+ILYD NGN V P +TQ PLLTWK
Subjt:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

XP_038886392.1 uncharacterized protein LOC120076591 [Benincasa hispida]2.4e-6683.92Show/hide
Query:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA
        MAR+LQ+MH SQ TAQVGMAGVSLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATV+TTQRVNAC+VN+ E +N NDEMFFSREQQAA
Subjt:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
        +WQKNILMGGKCQLP+FSG+ILYDPNGNAV P KT  PLLTWK
Subjt:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

TrEMBL top hitse value%identityAlignment
A0A0A0K8P1 Uncharacterized protein5.5e-6483.22Show/hide
Query:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA
        MAR+LQI+HSSQGTAQVGMAGVSLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATVVTTQR     VN+ EP+NGNDEMFFSREQQA+
Subjt:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
        +W KNILMGGKCQLP+FSG+ILYDPNGNAV P KT  PLLTWK
Subjt:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

A0A1S3C3W7 uncharacterized protein LOC1034965804.3e-6179.72Show/hide
Query:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA
        MAR+LQI+HSSQGT QVGMAGVSLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATVVTT +VNA      EP+N N+EMFFSREQQA+
Subjt:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
        +W KNILMGGKCQLP+FSG+ILYDPNGN V P KT  PLLTWK
Subjt:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

A0A5A7SQ79 Putative Nucleolar protein 164.3e-6179.72Show/hide
Query:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA
        MAR+LQI+HSSQGT QVGMAGVSLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATVVTT +VNA      EP+N N+EMFFSREQQA+
Subjt:  MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAA

Query:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
        +W KNILMGGKCQLP+FSG+ILYDPNGN V P KT  PLLTWK
Subjt:  VWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

A0A6J1H530 uncharacterized protein LOC1114606484.5e-6683.33Show/hide
Query:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA
        MAR+LQ +MHSSQ TAQVGMAG SLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATVVTTQRVN C+VN+PEP+NGNDEMFFSREQ+A
Subjt:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
        AVW+KNILMGGKCQLP+FSG+ILYD NGN V P +TQ PLLTWK
Subjt:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

A0A6J1JR28 uncharacterized protein LOC1114875774.2e-6481.25Show/hide
Query:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA
        MAR+LQ +MHSSQ TAQVGMAG SLL+CAFALFMC SHARKWR RWNACLDYG EFE+PVIELNQEATVVTTQRVN C+VN+ EP+N NDEMFFSREQ+A
Subjt:  MARELQ-IMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQA

Query:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK
         VW+KNILMGGKCQLP+FSG+ILYD NGN V P +TQ PLLTWK
Subjt:  AVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein4.6e-0739.62Show/hide
Query:  NGNDEMFFSREQQAAVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHP
        N  +E   + E++  +WQ+ ILMGGKC+  +FSG+I YD NG  +     + P
Subjt:  NGNDEMFFSREQQAAVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHP

AT1G71740.1 unknown protein2.5e-2142.64Show/hide
Query:  QVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQ-QAAVWQKNILMGGKCQL
        ++G+A  S+ +   A     SH+++   RW AC  YG+   EPVI L  + T++    V           NG+  M  S +Q +  +WQKNILMGGKCQL
Subjt:  QVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQ-QAAVWQKNILMGGKCQL

Query:  PEFSGIILYDPNGNAVAPTKTQHPLLTWK
        P+FSG+ILYD +G  V P K   PLLTWK
Subjt:  PEFSGIILYDPNGNAVAPTKTQHPLLTWK

AT3G14760.1 unknown protein1.1e-0567.86Show/hide
Query:  VWQKNILMGGKCQLPEFSGIILYDPNGN
        VWQ+ ILMG KC+LP FSG+ILYD  G+
Subjt:  VWQKNILMGGKCQLPEFSGIILYDPNGN

AT3G18560.1 unknown protein5.1e-0631.82Show/hide
Query:  RVNACIVNSPEPDNGNDEMFFSREQQAAVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHP
        R N      P      + +    E++  VWQ+ ILMGGKC+  ++SG+I YD +G+ +     + P
Subjt:  RVNACIVNSPEPDNGNDEMFFSREQQAAVWQKNILMGGKCQLPEFSGIILYDPNGNAVAPTKTQHP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGGAACTGCAAATTATGCATTCTTCACAGGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTAGTGTGCGCTTTTGCATTGTTCATGTGTGATTCTCA
TGCTCGGAAATGGCGTGGCCGTTGGAATGCTTGCTTGGATTATGGCAACGAGTTTGAGGAACCTGTAATAGAGCTGAACCAGGAAGCAACGGTTGTGACTACGCAACGAG
TGAACGCCTGCATTGTGAATTCCCCCGAACCAGATAATGGCAACGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCAGTTTGGCAGAAGAACATACTCATGGGCGGG
AAGTGTCAGCTACCAGAATTCTCCGGCATCATATTATACGACCCGAATGGAAATGCTGTAGCCCCTACTAAAACTCAGCATCCTCTACTTACCTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGGAACTGCAAATTATGCATTCTTCACAGGGCACAGCTCAGGTTGGCATGGCTGGTGTGAGCCTTCTAGTGTGCGCTTTTGCATTGTTCATGTGTGATTCTCA
TGCTCGGAAATGGCGTGGCCGTTGGAATGCTTGCTTGGATTATGGCAACGAGTTTGAGGAACCTGTAATAGAGCTGAACCAGGAAGCAACGGTTGTGACTACGCAACGAG
TGAACGCCTGCATTGTGAATTCCCCCGAACCAGATAATGGCAACGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCAGTTTGGCAGAAGAACATACTCATGGGCGGG
AAGTGTCAGCTACCAGAATTCTCCGGCATCATATTATACGACCCGAATGGAAATGCTGTAGCCCCTACTAAAACTCAGCATCCTCTACTTACCTGGAAATGA
Protein sequenceShow/hide protein sequence
MARELQIMHSSQGTAQVGMAGVSLLVCAFALFMCDSHARKWRGRWNACLDYGNEFEEPVIELNQEATVVTTQRVNACIVNSPEPDNGNDEMFFSREQQAAVWQKNILMGG
KCQLPEFSGIILYDPNGNAVAPTKTQHPLLTWK