; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009876 (gene) of Chayote v1 genome

Gene IDSed0009876
OrganismSechium edule (Chayote v1)
DescriptionDNA binding
Genome locationLG11:33280929..33283774
RNA-Seq ExpressionSed0009876
SyntenySed0009876
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591445.1 hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sororia]1.7e-9585.71Show/hide
Query:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL
        MVEFS SDP LW EAL  YPS+IEAL KP+LVSLD FYRNELP LLH RNP+P+ITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLV+ AS+KAFQ L
Subjt:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL

Query:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS
        PD++KAVSELTPLKGVGPATASAVLAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYL  A KLQ KAKELSSEGQIFTPSDVERALWSTAI E++KGS+S
Subjt:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS

Query:  QLDPKNVAKTGAKRKRK
        QLDPKN  KTG+KRKRK
Subjt:  QLDPKNVAKTGAKRKRK

XP_004141302.1 uncharacterized protein LOC101204707 [Cucumis sativus]1.9e-9484.33Show/hide
Query:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL
        M+EFS SDP+LW+EAL  Y S+IEAL KP+LVSLD FYRNELPL+LH RNP+P+ITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLV+ AS+KAFQ L
Subjt:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL

Query:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS
        PD++KAVSELTPLKGVGPATASAVLAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYLL A+KL+QKAKELS EG+IFTPSDVERALWS AI E+LKGSKS
Subjt:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS

Query:  QLDPKNVAKTGAKRKRK
        QLDP N  KTG KRKRK
Subjt:  QLDPKNVAKTGAKRKRK

XP_022936826.1 uncharacterized protein LOC111443296 [Cucurbita moschata]1.6e-9384.72Show/hide
Query:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP
        +EFS SDP LW EAL  YPSRIEAL KP+LVSLD+FYRNELP LLH RNP+P+ITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLV+ AS+KAFQ LP
Subjt:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP

Query:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKSQ
        D++KAVSELTPLKGVGPATASAVLAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYL  A KLQ KAKELSSEGQIFTPSDVERALWSTAI E++KGS+SQ
Subjt:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKSQ

Query:  LDPKNVAKTGAKRKRK
        L  KN  KTG+KRKRK
Subjt:  LDPKNVAKTGAKRKRK

XP_022977105.1 uncharacterized protein LOC111477273 [Cucurbita maxima]1.4e-9484.79Show/hide
Query:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL
        MVEF+ SDP LW EAL  YPS+IEAL KP+LVSLD FYRNELP LLH RNP+P+ITTSELSKLMQWKLTRGKWRPRL DFVSSLDESLV+ AS+KAFQ L
Subjt:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL

Query:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS
        PD++KAVSELTPLKGVGPATASAVLAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYL  A KLQ KAKELSSEGQIFTPSDVERALWSTAI E++KGS+S
Subjt:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS

Query:  QLDPKNVAKTGAKRKRK
        QLDPKN  K GAKRKRK
Subjt:  QLDPKNVAKTGAKRKRK

XP_023536029.1 uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo]1.5e-9686.18Show/hide
Query:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL
        MVEFS S+P LW EALC YPS+IEAL KP+LVSLD FYRNELP LLH RNP+P+ITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLV+ AS+KAFQ L
Subjt:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL

Query:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS
        PD++KAVSELTPLKGVGPATASAVLAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYL  A KLQ KAKELSSEGQIFTPSDVERALWSTAI E++KGS+S
Subjt:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS

Query:  QLDPKNVAKTGAKRKRK
        QLDPKN  KTGAKRKRK
Subjt:  QLDPKNVAKTGAKRKRK

TrEMBL top hitse value%identityAlignment
A0A0A0L3W6 Uncharacterized protein9.1e-9584.33Show/hide
Query:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL
        M+EFS SDP+LW+EAL  Y S+IEAL KP+LVSLD FYRNELPL+LH RNP+P+ITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLV+ AS+KAFQ L
Subjt:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL

Query:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS
        PD++KAVSELTPLKGVGPATASAVLAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYLL A+KL+QKAKELS EG+IFTPSDVERALWS AI E+LKGSKS
Subjt:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS

Query:  QLDPKNVAKTGAKRKRK
        QLDP N  KTG KRKRK
Subjt:  QLDPKNVAKTGAKRKRK

A0A1S3BUF7 uncharacterized protein LOC103493629 isoform X12.5e-9281.94Show/hide
Query:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP
        ++FS+SDP+LW+EAL  Y S+IEAL KP+LVSLD FYRNELPL+LH R P+P+ITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLV+ AS+KAFQ LP
Subjt:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP

Query:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKSQ
        D++KAVSELTPLKGVGPATASA+LAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYLL A+KLQ+KAKELS EG+ FTPSDVERALWS AI E+LKGS+SQ
Subjt:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKSQ

Query:  LDPKNVAKTGAKRKRK
        LDP N  KTG KRKRK
Subjt:  LDPKNVAKTGAKRKRK

A0A6J1CCK9 uncharacterized protein LOC1110102561.4e-9082.49Show/hide
Query:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL
        MVEF +SDP LW EAL  YPS+IEAL KP+LVSLD FYRNELP LLH RNPNP+ITT ELSKLMQWKLTRGKWRPRLLDFVSSLDESLV+ AS+KAFQ L
Subjt:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL

Query:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS
        PD++KAVSELTPLKGVGPATASAVLAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYL  A+ LQ+KAKELSS+GQIFTPSDVERALWS+A  E+LK S+S
Subjt:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS

Query:  QLDPKNVAKTGAKRKRK
        QL+PKN   +GAKRKRK
Subjt:  QLDPKNVAKTGAKRKRK

A0A6J1F8K0 uncharacterized protein LOC1114432967.7e-9484.72Show/hide
Query:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP
        +EFS SDP LW EAL  YPSRIEAL KP+LVSLD+FYRNELP LLH RNP+P+ITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLV+ AS+KAFQ LP
Subjt:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP

Query:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKSQ
        D++KAVSELTPLKGVGPATASAVLAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYL  A KLQ KAKELSSEGQIFTPSDVERALWSTAI E++KGS+SQ
Subjt:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKSQ

Query:  LDPKNVAKTGAKRKRK
        L  KN  KTG+KRKRK
Subjt:  LDPKNVAKTGAKRKRK

A0A6J1ILC1 uncharacterized protein LOC1114772737.0e-9584.79Show/hide
Query:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL
        MVEF+ SDP LW EAL  YPS+IEAL KP+LVSLD FYRNELP LLH RNP+P+ITTSELSKLMQWKLTRGKWRPRL DFVSSLDESLV+ AS+KAFQ L
Subjt:  MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRL

Query:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS
        PD++KAVSELTPLKGVGPATASAVLAAYAP+VAPFMSDEAMEAALGNSKDYSLKQYL  A KLQ KAKELSSEGQIFTPSDVERALWSTAI E++KGS+S
Subjt:  PDVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKS

Query:  QLDPKNVAKTGAKRKRK
        QLDPKN  K GAKRKRK
Subjt:  QLDPKNVAKTGAKRKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12210.1 DNA binding2.6e-5474.64Show/hide
Query:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP
        +EF  SD  +WKEAL  Y SRIE+L KP+LVSLDQFYR +LP LLH R+PNP++TTSELS+LM+WKL+RGKWRPRLLDFVSSLD+S+V+SAS KAF+ LP
Subjt:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP

Query:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDE
        D++KAV ELT LKGVG ATASAVLAAYAP++APFMSDE
Subjt:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDE

AT3G12210.2 DNA binding1.6e-7568.37Show/hide
Query:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP
        +EF  SD  +WKEAL  Y SRIE+L KP+LVSLDQFYR +LP LLH R+PNP++TTSELS+LM+WKL+RGKWRPRLLDFVSSLD+S+V+SAS KAF+ LP
Subjt:  VEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLP

Query:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKSQ
        D++KAV ELT LKGVG ATASAVLAAYAP++APFMSDEAME ALGNSKDYSLKQYLL A KLQ KAKEL  +G+   PSD+ERALWS  +  + +  KS 
Subjt:  DVAKAVSELTPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKSQ

Query:  LDPKNVAKTGAKRKR
                +G KRKR
Subjt:  LDPKNVAKTGAKRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGTTCTCGGATTCCGATCCAAGTCTGTGGAAAGAAGCCCTGTGTTGTTATCCATCCCGAATCGAAGCCCTAGCCAAACCCGATTTGGTTTCTCTGGACCAATT
TTACCGCAACGAACTCCCTCTTCTTCTCCACCATCGAAACCCTAACCCTCACATCACCACTTCCGAGCTCTCCAAACTCATGCAATGGAAGCTCACTCGCGGCAAATGGA
GGCCGCGTCTCTTGGACTTCGTTTCATCATTGGACGAATCGCTCGTCGAATCCGCCTCGCGAAAGGCCTTCCAGCGCCTTCCTGATGTTGCCAAAGCTGTTTCTGAGCTT
ACGCCGCTCAAAGGCGTGGGTCCGGCCACTGCCTCCGCCGTTCTAGCTGCCTACGCTCCCGAGGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCAGCTCTTGGTAA
CTCCAAGGATTATTCATTGAAACAGTACTTATTGCTCGCAGATAAGTTGCAACAAAAAGCTAAGGAGTTAAGCTCGGAGGGACAAATTTTCACGCCATCGGATGTAGAGA
GGGCTTTGTGGAGTACAGCTATAGAGGAAAGATTAAAAGGTTCAAAATCACAATTAGATCCCAAGAATGTAGCTAAAACTGGAGCTAAAAGAAAGAGAAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
GAGATTTAAAGGTATTTTTTATCCCTCTTATCTTGGTGGAGTCTATGCTCTTAGTGTAATCTAGATTATTGTGAGAGAGTACGTATCTCACTGTAATAAAATTTGTAATA
GGATTATTGCTGGACAAACAAGTTTCTTTTGATTATTTTTGTTGGAAGACTCATTCTCTCTATCGAGAACCTCGAGTCTTTTATTTTGAAGGGAAATTCTCTCCCCTGAC
ATTGGCTCCATGTTGGAGAGTGATTGTGTTCTAGCTTGATTGGTTGTTGAATATATTTACTTTGTGTTAGGCAAATTGAGTTGGAGTGGTTTGGGTTATTACGATTGTGG
TTGTTTGAAAACTTGTACTAAAACCCCCCCGCCAACTAGCGAAAGGTAGACAAAGAAATTGGCATTTTCAAATATCAAAGCGCAGTGGAGACGGGGCAAGGTCGCCTGAG
CAGCAATGGTGGAGTTCTCGGATTCCGATCCAAGTCTGTGGAAAGAAGCCCTGTGTTGTTATCCATCCCGAATCGAAGCCCTAGCCAAACCCGATTTGGTTTCTCTGGAC
CAATTTTACCGCAACGAACTCCCTCTTCTTCTCCACCATCGAAACCCTAACCCTCACATCACCACTTCCGAGCTCTCCAAACTCATGCAATGGAAGCTCACTCGCGGCAA
ATGGAGGCCGCGTCTCTTGGACTTCGTTTCATCATTGGACGAATCGCTCGTCGAATCCGCCTCGCGAAAGGCCTTCCAGCGCCTTCCTGATGTTGCCAAAGCTGTTTCTG
AGCTTACGCCGCTCAAAGGCGTGGGTCCGGCCACTGCCTCCGCCGTTCTAGCTGCCTACGCTCCCGAGGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCAGCTCTT
GGTAACTCCAAGGATTATTCATTGAAACAGTACTTATTGCTCGCAGATAAGTTGCAACAAAAAGCTAAGGAGTTAAGCTCGGAGGGACAAATTTTCACGCCATCGGATGT
AGAGAGGGCTTTGTGGAGTACAGCTATAGAGGAAAGATTAAAAGGTTCAAAATCACAATTAGATCCCAAGAATGTAGCTAAAACTGGAGCTAAAAGAAAGAGAAAAGCTT
GATGTTTGACAGCAGACATCCTACTTGATAACGATCTCTCGTTTTTTTTGTTTTTGAAATTTAAGTTTGTATTTAGTCAAATTCTCGACCTGTAATTTGATCTTCTCTCA
AGGAAGTTAGTAAATTCTAACTAAATTCCATAAACCTAAATATGTTAGTTTAGATAGTGTTGTGTTATAGACTTTTTGCAC
Protein sequenceShow/hide protein sequence
MVEFSDSDPSLWKEALCCYPSRIEALAKPDLVSLDQFYRNELPLLLHHRNPNPHITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVESASRKAFQRLPDVAKAVSEL
TPLKGVGPATASAVLAAYAPEVAPFMSDEAMEAALGNSKDYSLKQYLLLADKLQQKAKELSSEGQIFTPSDVERALWSTAIEERLKGSKSQLDPKNVAKTGAKRKRKA