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Sed0009884 (gene) of Chayote v1 genome

Gene IDSed0009884
OrganismSechium edule (Chayote v1)
DescriptionGATA-N domain-containing protein
Genome locationLG04:40989806..40991233
RNA-Seq ExpressionSed0009884
SyntenySed0009884
Gene Ontology termsGO:0006813 - potassium ion transport (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456929.1 PREDICTED: uncharacterized protein LOC103496731 [Cucumis melo]5.5e-3861.63Show/hide
Query:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEK-------------------------GSSRDAELLDDARQATKSGGRMTREQYGALRRK
        MVAIS       SQLGQGWK+ R R   RSSNLRV A+  E+                          SSRDAELLDDARQATK+GGRMTREQYGALRRK
Subjt:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEK-------------------------GSSRDAELLDDARQATKSGGRMTREQYGALRRK

Query:  KGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
         G TYKDFFKSY                  VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLF K
Subjt:  KGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

XP_022941869.1 uncharacterized protein LOC111447101 [Cucurbita moschata]1.1e-3860.23Show/hide
Query:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA
        MVAIS      +SQ GQGWK ARE    RSSNLRVSAK+ EKG                             SSRDAELLDDARQATK+GGRM+REQYGA
Subjt:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA

Query:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
        LRRK G TYKDFFKSY                  VCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K FFK
Subjt:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

XP_022996627.1 uncharacterized protein LOC111491808 [Cucurbita maxima]1.9e-3860.23Show/hide
Query:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA
        MVAIS      +SQ GQGWK ARE    RSSNLRVSAKA EKG                             SSRDAELL+DARQATKSGGRM++EQYGA
Subjt:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA

Query:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
        LRRK G TYKDFFKSY                  VCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K FFK
Subjt:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

XP_023532465.1 uncharacterized protein LOC111794620 [Cucurbita pepo subsp. pepo]5.0e-3960.8Show/hide
Query:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA
        MVAIS      +SQ GQGWK ARE    RSSNLRVSAKA EKG                             SSRDAELLDDARQATK+GGRM+REQYGA
Subjt:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA

Query:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
        LRRK G TYKDFFKSY                  VCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K FFK
Subjt:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

XP_038891315.1 uncharacterized protein LOC120080762 [Benincasa hispida]2.1e-3761.58Show/hide
Query:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG------------------------------SSRDAELLDDARQATKSGGRMTREQYG
        MVAIS       SQL QGWK  R  R  RSSNLRV AKAAEKG                              SSRDAELLDDARQATK+GGRMTREQYG
Subjt:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG------------------------------SSRDAELLDDARQATKSGGRMTREQYG

Query:  ALRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
        ALRRK G TYKDFFKSY                  VCKKDTRGEARQVDKLGRYVHVACLEKS SSSGNFFSKLF K
Subjt:  ALRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

TrEMBL top hitse value%identityAlignment
A0A0A0KM41 GATA-N domain-containing protein4.2e-3660.62Show/hide
Query:  SQLGQGWKAARERRTGRSSNLRVSAKAAEK-------------------------GSSRDAELLDDARQATKSGGRMTREQYGALRRKKGATYKDFFKSY
        SQLGQGWK+ R R   RSSNLRV A+  E+                          S+RDAELLDDARQATK+GGRM+REQYGALRRK G TYKDFFKSY
Subjt:  SQLGQGWKAARERRTGRSSNLRVSAKAAEK-------------------------GSSRDAELLDDARQATKSGGRMTREQYGALRRKKGATYKDFFKSY

Query:  ------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
                          VCKKDTRGEARQVDKLGRYVHVACLEKSNSS GNFFSK F K
Subjt:  ------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

A0A1S3C3X8 uncharacterized protein LOC1034967312.7e-3861.63Show/hide
Query:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEK-------------------------GSSRDAELLDDARQATKSGGRMTREQYGALRRK
        MVAIS       SQLGQGWK+ R R   RSSNLRV A+  E+                          SSRDAELLDDARQATK+GGRMTREQYGALRRK
Subjt:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEK-------------------------GSSRDAELLDDARQATKSGGRMTREQYGALRRK

Query:  KGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
         G TYKDFFKSY                  VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLF K
Subjt:  KGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

A0A5D3DFR3 GATA-N domain-containing protein2.7e-3861.63Show/hide
Query:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEK-------------------------GSSRDAELLDDARQATKSGGRMTREQYGALRRK
        MVAIS       SQLGQGWK+ R R   RSSNLRV A+  E+                          SSRDAELLDDARQATK+GGRMTREQYGALRRK
Subjt:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEK-------------------------GSSRDAELLDDARQATKSGGRMTREQYGALRRK

Query:  KGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
         G TYKDFFKSY                  VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLF K
Subjt:  KGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

A0A6J1FPP4 uncharacterized protein LOC1114471015.4e-3960.23Show/hide
Query:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA
        MVAIS      +SQ GQGWK ARE    RSSNLRVSAK+ EKG                             SSRDAELLDDARQATK+GGRM+REQYGA
Subjt:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA

Query:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
        LRRK G TYKDFFKSY                  VCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K FFK
Subjt:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

A0A6J1K2I3 uncharacterized protein LOC1114918089.1e-3960.23Show/hide
Query:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA
        MVAIS      +SQ GQGWK ARE    RSSNLRVSAKA EKG                             SSRDAELL+DARQATKSGGRM++EQYGA
Subjt:  MVAIS------SSQLGQGWKAARERRTGRSSNLRVSAKAAEKG-----------------------------SSRDAELLDDARQATKSGGRMTREQYGA

Query:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK
        LRRK G TYKDFFKSY                  VCKKDTRGEARQVDKLGRY HVACLEKSNSSS NFF+K FFK
Subjt:  LRRKKGATYKDFFKSY------------------VCKKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLFFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56290.1 unknown protein1.0e-2651.45Show/hide
Query:  VAISSSQLGQGWKAARERRTGRSSNLRVSAKAAEKGSSRDAELLDDARQATKSGGRMTREQYGALRRKKGATYKDFFKSYV------------------C
        V +S+ Q     K   E  T   + L  +   ++  S +DAELL +AR+ATKSG +MT+EQYGALRRK G TYKDFFKSYV                  C
Subjt:  VAISSSQLGQGWKAARERRTGRSSNLRVSAKAAEKGSSRDAELLDDARQATKSGGRMTREQYGALRRKKGATYKDFFKSYV------------------C

Query:  KKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLF
        KKDT+GEARQVDKLGRY HV+CL+  N  SGNFF++LF
Subjt:  KKDTRGEARQVDKLGRYVHVACLEKSNSSSGNFFSKLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCGATTTCTTCGTCGCAATTAGGGCAGGGATGGAAGGCGGCGAGGGAGAGGCGTACTGGCCGGAGCTCGAATCTGAGAGTATCGGCGAAAGCGGCGGAGAAGGG
AAGCAGTCGCGACGCCGAGCTTCTCGATGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGACCCGGGAACAGTATGGAGCTCTAAGAAGAAAGAAAGGAGCAACTT
ACAAAGACTTCTTCAAATCTTATGTATGCAAGAAGGACACAAGAGGAGAGGCAAGACAAGTTGATAAACTTGGAAGATATGTTCATGTTGCTTGTTTGGAGAAATCCAAC
TCTTCCTCAGGGAACTTCTTCTCTAAACTCTTCTTTAAATCAAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCGATTTCTTCGTCGCAATTAGGGCAGGGATGGAAGGCGGCGAGGGAGAGGCGTACTGGCCGGAGCTCGAATCTGAGAGTATCGGCGAAAGCGGCGGAGAAGGG
AAGCAGTCGCGACGCCGAGCTTCTCGATGACGCCCGTCAGGCCACCAAATCCGGCGGTAGAATGACCCGGGAACAGTATGGAGCTCTAAGAAGAAAGAAAGGAGCAACTT
ACAAAGACTTCTTCAAATCTTATGTATGCAAGAAGGACACAAGAGGAGAGGCAAGACAAGTTGATAAACTTGGAAGATATGTTCATGTTGCTTGTTTGGAGAAATCCAAC
TCTTCCTCAGGGAACTTCTTCTCTAAACTCTTCTTTAAATCAAATTGTTGA
Protein sequenceShow/hide protein sequence
MVAISSSQLGQGWKAARERRTGRSSNLRVSAKAAEKGSSRDAELLDDARQATKSGGRMTREQYGALRRKKGATYKDFFKSYVCKKDTRGEARQVDKLGRYVHVACLEKSN
SSSGNFFSKLFFKSNC