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Sed0009903 (gene) of Chayote v1 genome

Gene IDSed0009903
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:8307343..8307648
RNA-Seq ExpressionSed0009903
SyntenySed0009903
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067665.1 hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa]1.6e-1963.41Show/hide
Query:  MARDTSRSEIGGESDG-GRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF
        MARD    E GG   G    GGD+FFGKDDMKEY WDGV+TE+TVRFIE +SA KALRKRS++  E FNCF+FL ++C F F
Subjt:  MARDTSRSEIGGESDG-GRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF

KAG6576802.1 hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1657.78Show/hide
Query:  MARDTSRSEIGGESDGGRG---------GGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF
        MARDT   E  G   GG+           GDIFFGKDDMK YVWD VFTE+TVRF+E +SA++ LRKRSK+  E F CF+FL  L CFNF
Subjt:  MARDTSRSEIGGESDGGRG---------GGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF

KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]6.5e-0859.02Show/hide
Query:  MARDTSRSEIGGESDGGRG-------------GGDIFFGKDDMKEYVWDGVFTEQTVRFIE
        MA DT+  E GG+ DGGR               GDIFFGKDDMKEY WDG FTE+TVRFIE
Subjt:  MARDTSRSEIGGESDGGRG-------------GGDIFFGKDDMKEYVWDGVFTEQTVRFIE

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-0859.02Show/hide
Query:  MARDTSRSEIGGESDGGRG-------------GGDIFFGKDDMKEYVWDGVFTEQTVRFIE
        MA DT+  E GG+ DGGR               GDIFFGKDDMKEY WDG FTE+TVRFIE
Subjt:  MARDTSRSEIGGESDGGRG-------------GGDIFFGKDDMKEYVWDGVFTEQTVRFIE

KGN57263.1 hypothetical protein Csa_009618 [Cucumis sativus]2.1e-1964.63Show/hide
Query:  MARDTSRSEIGGESDG-GRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF
        MARD    E GG   G    GGDIFFGKDDMKEY WDGV+TE+TVRFIE +SA KALRKRS++  E FNCF+FL ++ CF F
Subjt:  MARDTSRSEIGGESDG-GRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF

TrEMBL top hitse value%identityAlignment
A0A0A0L658 Uncharacterized protein1.0e-1964.63Show/hide
Query:  MARDTSRSEIGGESDG-GRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF
        MARD    E GG   G    GGDIFFGKDDMKEY WDGV+TE+TVRFIE +SA KALRKRS++  E FNCF+FL ++ CF F
Subjt:  MARDTSRSEIGGESDG-GRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF

A0A5D3DK72 Uncharacterized protein8.0e-2063.41Show/hide
Query:  MARDTSRSEIGGESDG-GRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF
        MARD    E GG   G    GGD+FFGKDDMKEY WDGV+TE+TVRFIE +SA KALRKRS++  E FNCF+FL ++C F F
Subjt:  MARDTSRSEIGGESDG-GRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGATACATCTCGCTCGGAAATCGGCGGCGAGAGCGACGGCGGGCGTGGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGTATGGGATGG
AGTTTTCACGGAACAAACAGTTCGATTCATTGAAAGAGATTCCGCCATTAAAGCTCTCAGAAAAAGAAGCAAGAAAACAACAGAAGCTTTCAATTGCTTTCAGTTCTTGA
ATCTCCTATGCTGCTTCAATTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATTGAAGAGTGATTTCTGTTAGAAATGGCCAGAGATACATCTCGCTCGGAAATCGGCGGCGAGAGCGACGGCGGGCGTGGCGGCGGAGACATTTTCTTCGGTAAGGATGA
TATGAAAGAATACGTATGGGATGGAGTTTTCACGGAACAAACAGTTCGATTCATTGAAAGAGATTCCGCCATTAAAGCTCTCAGAAAAAGAAGCAAGAAAACAACAGAAG
CTTTCAATTGCTTTCAGTTCTTGAATCTCCTATGCTGCTTCAATTTCTAACTCTCTTCTTCTTCCTCCAATTTTTCCGATCACGAA
Protein sequenceShow/hide protein sequence
MARDTSRSEIGGESDGGRGGGDIFFGKDDMKEYVWDGVFTEQTVRFIERDSAIKALRKRSKKTTEAFNCFQFLNLLCCFNF