CuGenDBv2

Gene ID	Sed0009912
Organism	Sechium edule (Chayote v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	LG07:5495184..5500396
RNA-Seq Expression	Sed0009912
Synteny	Sed0009912
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575630.1 Protein LOW PSII ACCUMULATION 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

8.8e-197

88.46

Show/hide

Query:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS
        AIMAFLSSPP IPSLVRP H N LFSPISSSFSA R S RS  FG+Q   TSGFCFR+HCSDKERAAP T+SS+PKAGVPIYKPKTYEVL+SDA+NSLA 
Subjt:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS

Query:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV
        ALEDG  RLEIDFPPLPS+ISSYKGSSDEFIDANIQLALAVARNLQE++GTRSCIVFPDKP+K RASQ+FKTALD ++GIT+SSLDDVPAGPV SFFRS+
Subjt:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV

Query:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI
        RNTLDFDFEDENA RWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTV I
Subjt:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI

Query:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSL+FLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

XP_022954402.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata]

2.3e-197

88.46

Show/hide

Query:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS
        AIMAFLSSPP IPSLVRPFH N LFSPI+SSFSA R S RS  FG+Q   TSGFCFR+HCSDKERAAP T+SS+PKAGVPIYKPKTYEVL+SDA+NSLA 
Subjt:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS

Query:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV
        ALEDG  RLEIDFPPLPS+ISSYKGSSDEFIDANIQLALAVARNLQE++GTRSCIVFPDKP+K RASQ+FKTALD ++GIT+SSLDDVPAGPV SFFRS+
Subjt:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV

Query:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI
        RNTLDFDFEDENA RWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTV I
Subjt:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI

Query:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSL+FLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

XP_022992481.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima]

1.4e-197

88.46

Show/hide

Query:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS
        AIMAFLSSPP IPSLVRPFH N LFSPISSSFSA R S RS  FG+Q   TSGFCFR+HCSDKERAAP T+SS+PKAGVPIYKPKTYEVL+SDA+NSLA 
Subjt:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS

Query:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV
        ALEDG  RLEIDFPPLPS+ISSYKGSSDEFIDANIQLALAVARNLQE++GTRSCIVFPDKP+K RASQ+FKTALD ++GIT+SSLDD+PAGPV SFFRS+
Subjt:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV

Query:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI
        RNTLDFDFEDENA RWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTV I
Subjt:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI

Query:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSL+FLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

XP_023547388.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo]

1.5e-196

87.95

Show/hide

Query:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS
        AIMAFLSSPP IPSLVRPFH N LFSPISSSFSA R S RS  FG+Q   TSGFCFR+HCSDKERAAP T+SS+PKAGVPIYKPKTYEVL+SDA+NSLA 
Subjt:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS

Query:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV
        ALEDG  RLEIDFPPLPS+ISSYKGSSDEFIDANIQL+LAVARNLQE++GTRSCIVFPDKP+K RASQ+FKTALD ++GIT+SSLDDVPAGPV SFFRS+
Subjt:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV

Query:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI
        RNTLDFDFEDENA RWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTV I
Subjt:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI

Query:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETK+ELLRVLGLQEEQGSSL+FLRRGYK++TWWEED DSE+SSAWRS
Subjt:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

XP_038900014.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida]

1.2e-196

88.46

Show/hide

Query:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS
        AIMAF+SSPP+IPSL R FH N LFSPISSSF A R S RS  FG+Q   TSGFCFR+HC DKER +P TQSS+PKAGVPIYKPKTYEVL+SDA+NSLA 
Subjt:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS

Query:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV
        ALEDG  RLEIDFPPLPS+ISSYKGSSDEFIDANIQLALAVARNLQE++GTRSCIVFPDKPEKRRASQ+FKTALD ++GIT+SSLDDVPAGPV SFFRSV
Subjt:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV

Query:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI
        RNTLDFDFEDEN+ RWTSSDPPSLYIFINCSTREL LIEKYVETFASSIPTLLFNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA+
Subjt:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI

Query:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSL+FLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA03 DUF1995 domain-containing protein

3.5e-191

86.92

Show/hide

Query:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS
        AIMAFLSSPP IPSL  PFH N LFSPISSS    R S RS  FG+Q    SGFCFR+HC DKERAAP TQ S+PKAGVPIYKPKTYEVL+SDA+NSLA 
Subjt:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS

Query:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV
        ALEDG  RLEIDFPPLPS+ISSYKGSSD+FIDANIQLALAVARNLQE++G RSCIVFPDKPEKRRASQ+FKTALD ++GIT+SSLDDVPAG V SFFRSV
Subjt:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV

Query:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI
        RNTLDFDFED+NA RWTSSDPPSLYIFINCSTREL LIEKYVETFASSIP LLFNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA+
Subjt:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI

Query:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        APYIVNYSGALFRQY GPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSL+FLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

A0A1S3CFB8 protein LOW PSII ACCUMULATION 3, chloroplastic

6.4e-193

87.4

Show/hide

Query:  IMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLASA
        IMAF+SSPP IPSL RPF  N LFSPISSS    R S  S  FG+Q    SGFCFR+HC DKERAAP TQSS+PKAGVPIYKPKTYEVL+SDA+NSLA A
Subjt:  IMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLASA

Query:  LEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSVR
        LEDG  RLEIDFPPLPS+ISSYKGSSDEFIDANIQLALAVARNLQE++GTRSCIVFPDKPEKRRAS++FKTA+D ++GIT+SSLDDVPAGPV SFFRSVR
Subjt:  LEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSVR

Query:  NTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIA
        NTLDFDFED+NA RWTSSDPPSLYIFINCSTREL LIEKYVETFASSIPTLLFNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA+A
Subjt:  NTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIA

Query:  PYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        PYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSL+FLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  PYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

A0A5A7UU42 Protein LOW PSII ACCUMULATION 3

4.4e-194

87.92

Show/hide

Query:  IMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLASA
        IMAFLSSPP IPSL RPFH N LFSPISSS    R S  S  FG+Q    SGFCFR+HC DKERAAP TQSS+PKAGVPIYKPKTYEVL+SDA+NSLA A
Subjt:  IMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLASA

Query:  LEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSVR
        LEDG  RLEIDFPPLPS+ISSYKGSSDEFIDANIQLALAVARNLQE++GTRSCIVFPDKPEKRRAS++FKTA+D ++GIT+SSLDDVPAGPV SFFRSVR
Subjt:  LEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSVR

Query:  NTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIA
        NTLDFDFED+NA RWTSSDPPSLYIFINCSTREL LIEKYVETFASSIPTLLFNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA+A
Subjt:  NTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIA

Query:  PYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        PYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSL+FLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  PYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

A0A6J1GQW6 protein LOW PSII ACCUMULATION 3, chloroplastic

1.1e-197

88.46

Show/hide

Query:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS
        AIMAFLSSPP IPSLVRPFH N LFSPI+SSFSA R S RS  FG+Q   TSGFCFR+HCSDKERAAP T+SS+PKAGVPIYKPKTYEVL+SDA+NSLA 
Subjt:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS

Query:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV
        ALEDG  RLEIDFPPLPS+ISSYKGSSDEFIDANIQLALAVARNLQE++GTRSCIVFPDKP+K RASQ+FKTALD ++GIT+SSLDDVPAGPV SFFRS+
Subjt:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV

Query:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI
        RNTLDFDFEDENA RWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTV I
Subjt:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI

Query:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSL+FLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

A0A6J1JTN7 protein LOW PSII ACCUMULATION 3, chloroplastic

6.6e-198

88.46

Show/hide

Query:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS
        AIMAFLSSPP IPSLVRPFH N LFSPISSSFSA R S RS  FG+Q   TSGFCFR+HCSDKERAAP T+SS+PKAGVPIYKPKTYEVL+SDA+NSLA 
Subjt:  AIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQSSNPKAGVPIYKPKTYEVLISDASNSLAS

Query:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV
        ALEDG  RLEIDFPPLPS+ISSYKGSSDEFIDANIQLALAVARNLQE++GTRSCIVFPDKP+K RASQ+FKTALD ++GIT+SSLDD+PAGPV SFFRS+
Subjt:  ALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSV

Query:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI
        RNTLDFDFEDENA RWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLG+LGFPPKDLHYRFLSQFIPVFYIRIREYSKTV I
Subjt:  RNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAI

Query:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS
        APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSL+FLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  APYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

1.1e-144

76.09

Show/hide

Query:  TTQSSNPKAGVPIYKPKTYEVLISDASNSLASALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQ
        T+ +S+P+ GVP+YKPK+YEVL +DA+NSLA AL+D  +RLEIDFPPLPS ISSYKGSSD+FIDANIQLA+ V R LQE+  TR+CIVFPDKPEKRRASQ
Subjt:  TTQSSNPKAGVPIYKPKTYEVLISDASNSLASALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQ

Query:  IFKTALDLVNGITLSSLDDVPAGPVGSFFRSVRNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGIL
         FK A D V+GI++ SLDD+P   V +FFRS+R+TLDFDFEDEN   W   +PP+LYIFINCSTREL+ IEK+VETFASS P LLFNLEL+TLRADLG+L
Subjt:  IFKTALDLVNGITLSSLDDVPAGPVGSFFRSVRNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGIL

Query:  GFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRR
        GFPPKDLHYRFLSQFIPVFYIR REYSKTVA+AP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSL+FLRR
Subjt:  GFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRR

Query:  GYKSATWWEEDADSELSSAWRS
        GYKSATWWEED + E SS WR+
Subjt:  GYKSATWWEEDADSELSSAWRS

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

7.6e-146

76.09

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Query:  TTQSSNPKAGVPIYKPKTYEVLISDASNSLASALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQ
        T+ +S+P+ GVP+YKPK+YEVL +DA+NSLA AL+D  +RLEIDFPPLPS ISSYKGSSD+FIDANIQLA+ V R LQE+  TR+CIVFPDKPEKRRASQ
Subjt:  TTQSSNPKAGVPIYKPKTYEVLISDASNSLASALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQ

Query:  IFKTALDLVNGITLSSLDDVPAGPVGSFFRSVRNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGIL
         FK A D V+GI++ SLDD+P   V +FFRS+R+TLDFDFEDEN   W   +PP+LYIFINCSTREL+ IEK+VETFASS P LLFNLEL+TLRADLG+L
Subjt:  IFKTALDLVNGITLSSLDDVPAGPVGSFFRSVRNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGIL

Query:  GFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRR
        GFPPKDLHYRFLSQFIPVFYIR REYSKTVA+AP+++NY+GALFRQYPGPWQVMLKQ+D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSL+FLRR
Subjt:  GFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRR

Query:  GYKSATWWEEDADSELSSAWRS
        GYKSATWWEED + E SS WR+
Subjt:  GYKSATWWEEDADSELSSAWRS

AT5G48790.1 Domain of unknown function (DUF1995)

1.6e-10

26.65

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Query:  ISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSD----------KERAAPTTQSSNPKAGVP-IYKPKTYEVLISDASNSLASALEDGNTRLEIDFPPL
        +S SFS   + + +   G+ AS +      +H  +          K RA   +   N    V  +  P+ Y  LI+ A  ++  AL+D    +EI+FP  
Subjt:  ISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSD----------KERAAPTTQSSNPKAGVP-IYKPKTYEVLISDASNSLASALEDGNTRLEIDFPPL

Query:  PSDISSYKGSSD---EFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSVRNTLDFDFED--E
         S ++S  G  +   E  ++   +     R L   K   + I FP+  E        K A   V G T   LD +      S F       DF F +  +
Subjt:  PSDISSYKGSSD---EFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITLSSLDDVPAGPVGSFFRSVRNTLDFDFED--E

Query:  NADRWTSSDPPSLYIFINCSTRELALIEK-YVETFASSIPTL-LFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKT----VAIAPYIV
         ADR    D   L  +   +  E+ ++E+ Y E   ++   L +FN EL+ +R+     G+ PK             FY ++   +KT    +    YI 
Subjt:  NADRWTSSDPPSLYIFINCSTRELALIEK-YVETFASSIPTL-LFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIREYSKT----VAIAPYIV

Query:  NY----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL
        N+     G LFR YPGPWQV L+++ N Y CV + E+  +L E   ++L
Subjt:  NY----SGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELL

Sequences

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CDS sequence

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ATGCAAAATATTGTTGGGGAAAATTGTAGATGTGGCGTGTTTAAGCTTCGTTATCGTCTCATCCAAACGACCGGCGACGATACATCCACAGTGATCGTCTCAGAGCTCTG
CTCGGCGATCATGGCGTTTCTCTCTTCACCACCGCGCATTCCCTCTCTGGTTCGACCGTTTCACAGAAACCTTCTTTTCTCCCCCATTTCTTCTTCCTTCAGCGCACGAC
GGAGTTCTAATCGTTCCGGTTCGTTTGGTTCTCAAGCTTCAACGACTTCGGGGTTTTGCTTTAGGGTTCACTGCAGTGACAAAGAACGGGCTGCGCCGACTACTCAGAGC
TCCAATCCTAAGGCCGGAGTTCCGATTTACAAACCTAAAACCTACGAGGTGCTGATCTCCGATGCTTCGAATTCTCTCGCTTCTGCTCTTGAAGATGGAAACACCCGCTT
GGAGATCGATTTCCCTCCCCTGCCTAGCGACATTTCCTCATATAAGGGATCTTCAGATGAGTTCATTGATGCAAATATTCAACTTGCCCTGGCTGTTGCCAGGAATCTTC
AAGAAAGGAAAGGAACTAGATCTTGCATTGTGTTTCCGGATAAGCCAGAGAAGCGTAGAGCTTCACAGATATTCAAAACAGCTCTTGACTTGGTTAATGGAATAACTTTA
AGTTCCTTGGATGATGTCCCTGCTGGACCAGTCGGGTCTTTCTTCAGATCTGTTCGGAACACCCTTGATTTTGATTTTGAAGATGAAAATGCAGATCGTTGGACATCTAG
TGACCCTCCCTCACTGTACATATTTATTAATTGCAGTACGCGTGAGCTTGCTTTGATAGAGAAGTATGTGGAAACTTTTGCCTCGTCAATCCCCACTCTTTTGTTTAATC
TAGAACTTGAAACCTTGCGTGCAGACTTGGGCATACTGGGATTCCCTCCTAAAGATTTGCATTATCGATTTCTCTCTCAGTTTATCCCAGTGTTCTACATTCGAATCAGA
GAGTATTCTAAGACAGTAGCAATAGCACCTTATATTGTCAATTACAGTGGAGCATTGTTTCGTCAATACCCGGGGCCTTGGCAAGTGATGCTAAAACAATCAGATAATTC
ATATGCTTGCGTTGCAGAGAGTGAGACAAGGTTCACCCTTGGGGAAACAAAAGATGAACTGCTAAGGGTCCTTGGACTACAGGAGGAACAAGGAAGCTCATTAGATTTTC
TTCGCAGGGGCTACAAGTCTGCCACTTGGTGGGAAGAAGATGCTGATTCTGAACTATCTTCGGCATGGCGCAGTTGA

mRNA sequence

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Protein sequence

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MQNIVGENCRCGVFKLRYRLIQTTGDDTSTVIVSELCSAIMAFLSSPPRIPSLVRPFHRNLLFSPISSSFSARRSSNRSGSFGSQASTTSGFCFRVHCSDKERAAPTTQS
SNPKAGVPIYKPKTYEVLISDASNSLASALEDGNTRLEIDFPPLPSDISSYKGSSDEFIDANIQLALAVARNLQERKGTRSCIVFPDKPEKRRASQIFKTALDLVNGITL
SSLDDVPAGPVGSFFRSVRNTLDFDFEDENADRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGILGFPPKDLHYRFLSQFIPVFYIRIR
EYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQSDNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLDFLRRGYKSATWWEEDADSELSSAWRS

Sed0009912 (gene) of Chayote v1 genome