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Sed0009920 (gene) of Chayote v1 genome

Gene IDSed0009920
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:34341293..34343147
RNA-Seq ExpressionSed0009920
SyntenySed0009920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039201.1 uncharacterized protein E6C27_scaffold121G001180 [Cucumis melo var. makuwa]1.5e-0440.95Show/hide
Query:  MEDSTENTKKLI---SENH-VPHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPP
        M+DSTE +KK     S+ H +PH   I   ++S+L+ F+AI +  GF       RP S   +D YT  S PP  A +PP D+S +     R + PPPPP 
Subjt:  MEDSTENTKKLI---SENH-VPHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPP

Query:  SNGGG
        S GGG
Subjt:  SNGGG

XP_008464347.1 PREDICTED: uncharacterized protein LOC103502255 [Cucumis melo]1.7e-1144.12Show/hide
Query:  MEDSTENTKKLISENHVPHRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGPM
        +E+S ENTK+L  +    H PF    +N V ++ MA ++ LGF V RPI    +DSY   S PPP   +PP+++  + +  F   N PPPPPPSNGGG  
Subjt:  MEDSTENTKKLISENHVPHRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGPM

Query:  TN
        TN
Subjt:  TN

XP_008464348.1 PREDICTED: uncharacterized protein LOC103502256 [Cucumis melo]1.5e-0440.95Show/hide
Query:  MEDSTENTKKLI---SENH-VPHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPP
        M+DSTE +KK     S+ H +PH   I   ++S+L+ F+AI +  GF       RP S   +D YT  S PP  A +PP D+S +     R + PPPPP 
Subjt:  MEDSTENTKKLI---SENH-VPHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPP

Query:  SNGGG
        S GGG
Subjt:  SNGGG

XP_031743811.1 uncharacterized protein LOC116404676 [Cucumis sativus]2.1e-0941.75Show/hide
Query:  MEDSTENTKKLISENHV-PHRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGP
        +E+S ENTKK+  ++ V  H PF    +  V ++ MA ++ LGF V        +DSY     PPPK  +PP++ S + +  F   N PPPPPPSNGGG 
Subjt:  MEDSTENTKKLISENHV-PHRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGP

Query:  MTN
         TN
Subjt:  MTN

XP_038886557.1 uncharacterized protein LOC120076731 [Benincasa hispida]3.4e-0439.25Show/hide
Query:  DSTENTKKLISENHV----PHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPPSN
        DS E +KK + ++       H P      +S+L+ F+AI + LGF       RP    P+D YT  S PP  A NPP DES +     R + PPPPP S 
Subjt:  DSTENTKKLISENHV----PHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPPSN

Query:  GGGPMTN
        GGG  T+
Subjt:  GGGPMTN

TrEMBL top hitse value%identityAlignment
A0A0A0K8Z6 Uncharacterized protein3.0e-0641.67Show/hide
Query:  HRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGPMTN
        H PF    +  V ++ MA ++ LGF V        +DSY     PPPK  +PP++ S + +  F   N PPPPPPSNGGG  TN
Subjt:  HRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGPMTN

A0A1S3CLD8 uncharacterized protein LOC1035022567.5e-0540.95Show/hide
Query:  MEDSTENTKKLI---SENH-VPHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPP
        M+DSTE +KK     S+ H +PH   I   ++S+L+ F+AI +  GF       RP S   +D YT  S PP  A +PP D+S +     R + PPPPP 
Subjt:  MEDSTENTKKLI---SENH-VPHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPP

Query:  SNGGG
        S GGG
Subjt:  SNGGG

A0A1S3CMT1 uncharacterized protein LOC1035022558.2e-1244.12Show/hide
Query:  MEDSTENTKKLISENHVPHRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGPM
        +E+S ENTK+L  +    H PF    +N V ++ MA ++ LGF V RPI    +DSY   S PPP   +PP+++  + +  F   N PPPPPPSNGGG  
Subjt:  MEDSTENTKKLISENHVPHRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGPM

Query:  TN
        TN
Subjt:  TN

A0A5A7T6U0 Uncharacterized protein8.2e-1244.12Show/hide
Query:  MEDSTENTKKLISENHVPHRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGPM
        +E+S ENTK+L  +    H PF    +N V ++ MA ++ LGF V RPI    +DSY   S PPP   +PP+++  + +  F   N PPPPPPSNGGG  
Subjt:  MEDSTENTKKLISENHVPHRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRF---NRPPPPPPSNGGGPM

Query:  TN
        TN
Subjt:  TN

A0A5D3D4J4 Uncharacterized protein7.5e-0540.95Show/hide
Query:  MEDSTENTKKLI---SENH-VPHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPP
        M+DSTE +KK     S+ H +PH   I   ++S+L+ F+AI +  GF       RP S   +D YT  S PP  A +PP D+S +     R + PPPPP 
Subjt:  MEDSTENTKKLI---SENH-VPHRPFIFPFYNSVLKVFMAIFKVLGFFVR----RPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQG--RFNRPPPPPP

Query:  SNGGG
        S GGG
Subjt:  SNGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTCAACTGAAAACACAAAGAAGCTTATTAGTGAAAACCATGTTCCTCATCGTCCTTTCATTTTTCCCTTTTACAACTCGGTCTTGAAAGTTTTCATGGCAAT
TTTCAAGGTTCTAGGGTTCTTTGTTCGTCGCCCGATATCGCTGCCACCGCAAGATTCCTACACCGGTTGCTCGTGCCCACCTCCGAAAGCGGGTAACCCGCCTGTTGATG
AATCGGTACAAGGACAAGGTAGGTTTAATCGTCCTCCGCCTCCTCCTCCGAGCAACGGTGGCGGTCCGATGACTAACCTATCTCCATCGGACCCAAACGATGAACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATTCAATACTAAGAACCAAACATTCCCTTTTCATTTAGAGGAAGAAGAAAGATTACAAGTTTTGAAAAAGAAAAATAGAGAGAAATGGAGGATTCAACTGAAAACACAAA
GAAGCTTATTAGTGAAAACCATGTTCCTCATCGTCCTTTCATTTTTCCCTTTTACAACTCGGTCTTGAAAGTTTTCATGGCAATTTTCAAGGTTCTAGGGTTCTTTGTTC
GTCGCCCGATATCGCTGCCACCGCAAGATTCCTACACCGGTTGCTCGTGCCCACCTCCGAAAGCGGGTAACCCGCCTGTTGATGAATCGGTACAAGGACAAGGTAGGTTT
AATCGTCCTCCGCCTCCTCCTCCGAGCAACGGTGGCGGTCCGATGACTAACCTATCTCCATCGGACCCAAACGATGAACAGTAGTTCTTGAATGTTACTTGTATTGATTT
AGTCGTACTTTTGTTTTTGTGAAAATTATTGTTAAGATTTAATAAAACTTCCTAATGAATTAGACATCTAATATATGTTGTAATTTACAAAGTTTCGGCCCTTTTGTTCT
TTTTCTTAAAGGAATTTGCATTGATGGAGC
Protein sequenceShow/hide protein sequence
MEDSTENTKKLISENHVPHRPFIFPFYNSVLKVFMAIFKVLGFFVRRPISLPPQDSYTGCSCPPPKAGNPPVDESVQGQGRFNRPPPPPPSNGGGPMTNLSPSDPNDEQ