; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009924 (gene) of Chayote v1 genome

Gene IDSed0009924
OrganismSechium edule (Chayote v1)
DescriptionRNA-binding protein 48
Genome locationLG01:63956386..63959486
RNA-Seq ExpressionSed0009924
SyntenySed0009924
Gene Ontology termsGO:0005654 - nucleoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034264 - RBM48, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR039599 - RNA-binding protein 48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598220.1 RNA-binding protein 48, partial [Cucurbita argyrosperma subsp. sororia]2.6e-9983.63Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MPR+T+EPPAVRVYTICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEEC EFTDVYFVKFHLVSNARFAKRKLDEFVFLGN+LQVSYAP+F
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DTKEKLE RRREVLAR +SGRPRGS V+S T+K  N SHS +TLEQK S EKR+YGDAAL SNPHVSQITRVSSDQDYF S SMNQTV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        KI+S S++L+  PV K+SRVDNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

XP_022961642.1 RNA-binding protein 48 isoform X1 [Cucurbita moschata]3.4e-9983.63Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MPR+T+EPPAVRVYTICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEEC EFTDVYFVKFHLVSNARFAKRKLDEFVFLGN+LQVSYAP+F
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DTKEKLE RRREVLAR  SGRPRGS V+S T+K  N SHS +TLEQK S EKR+YGDAAL SNPHVSQITRVSSDQDYF S SMNQTV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        KI+S S++L+  PV K+SRVDNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

XP_022997621.1 RNA-binding protein 48 isoform X1 [Cucurbita maxima]2.6e-9983.63Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MPR+T+EPPAVRVYTICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEEC EFTDVYFVKFHLVSNARFAKRKLDEFVFLGN+LQVSYAP+F
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DTKEKLE RRREVLAR +SGRPRGS V+S T+K  N SHS +TLEQK S EKR+YGDAAL SNPHVSQITRVSSDQDYF S SMNQTV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        KI+S S++L+  PV K+SRVDNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

XP_023545649.1 RNA-binding protein 48 [Cucurbita pepo subsp. pepo]5.0e-9882.74Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MPR+T+EPPAVRVYTICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEEC EFTDVYFVKFHLVSNARFAKRKLDEFVFLGN+LQVSYAP+F
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DTKEKLE RRREVLAR +SGRPRGS V+S T+K  N SHS +TLEQK S EKR+Y DAAL SNPHVSQITRVSSDQDYF S SMNQTV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        KI+S  ++L+  PV K+SRVDNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

XP_038884635.1 RNA-binding protein 48 isoform X1 [Benincasa hispida]5.0e-9882.74Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MPR TDEPPAVRVYT+CDESRYL+VRNVPALGCGDDLLKLFSSYGN+EECKPMDAEEC EFTDVYFVKFHLV++ARFAKRKLDEFVFLGN+LQVSYAPEF
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DT+EKLE RRREVLAR +SGRPRGS VSSTT+K  N S S +TLEQK S E R+YGD  LISNPHVSQITRVSSDQDYF S SMNQTV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        KI+SSS++LQ  P  KKSR+DNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

TrEMBL top hitse value%identityAlignment
A0A0A0LQL2 RNA-binding protein 485.0e-9682.3Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MP   DE  AVR YT+CDESRYLIVRNVPALGCGDDL KLFSSYGN+EECKPMDAEEC EFTDVYFVKFHLV+NARFAKRKLDEFVFLGN+LQVSYAPEF
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DTKEKLE RRREVLAR +SGRPRG+ VSSTT+KL N S S +TL+QK S EKR+YGDAALISNPHVSQITRVSSDQDYF S SMNQTV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        KI+SSS++LQ  P  KKSR+DNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

A0A6J1BRX6 RNA-binding protein 487.7e-9781.86Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MPR+T+EPPAVRVY ICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEEC EFTDVYF+KFHLV+NARFAKRKLDEFVFLGN+LQVSYAPEF
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DTKEKLE RRREVLAR   GR +GS+V ST + L+N SHS + LEQK S EKR+YGDAALISNP VSQ+T+VSSDQDYF S SMNQTV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        +I+SSS++LQ  PV KKSRVDNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

A0A6J1DGJ2 RNA-binding protein 481.2e-9782.3Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MPR+TDE PAVRVYTICDESR+LIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEEC EFTDVYFVKFHLV+NARFAKRKLDEFVFLGN+LQVSYAPEF
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DTKEKLE RRREVLAR +SGR +GS V STT+KL N +HS +TLEQK S EKR+YGDAALI+NPHVSQ+T+VSSDQD+F S SMN+TV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        KI+SSS++L+  P+ KKSRVDNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

A0A6J1HAQ6 RNA-binding protein 481.7e-9983.63Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MPR+T+EPPAVRVYTICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEEC EFTDVYFVKFHLVSNARFAKRKLDEFVFLGN+LQVSYAP+F
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DTKEKLE RRREVLAR  SGRPRGS V+S T+K  N SHS +TLEQK S EKR+YGDAAL SNPHVSQITRVSSDQDYF S SMNQTV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        KI+S S++L+  PV K+SRVDNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

A0A6J1K7Z4 RNA-binding protein 481.3e-9983.63Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        MPR+T+EPPAVRVYTICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEEC EFTDVYFVKFHLVSNARFAKRKLDEFVFLGN+LQVSYAP+F
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        ESL DTKEKLE RRREVLAR +SGRPRGS V+S T+K  N SHS +TLEQK S EKR+YGDAAL SNPHVSQITRVSSDQDYF S SMNQTV LVR KLD
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSKNLQTEPVIKKSRVDNRRRI
        KI+S S++L+  PV K+SRVDNRRRI
Subjt:  KIESSSKNLQTEPVIKKSRVDNRRRI

SwissProt top hitse value%identityAlignment
A4FVJ7 RNA-binding protein 487.6e-2538.86Show/hide
Query:  AVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFESLFDTKEK
        AV+VYTI  ESRYL+V+ VPA+G   +L++LF+ YG +EE +P+D     +FT+VY ++F  +++AR AKR  DE  F G QL V YAPE+E++ +TK+K
Subjt:  AVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFESLFDTKEK

Query:  LEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFP
        L+ RRR V           +  S   +KL ++  ++   E   S + R+     +  NP  ++   V+SD   FP
Subjt:  LEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFP

A6QPE1 RNA-binding protein 485.1e-2144.35Show/hide
Query:  RHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFES
        R    P AV+VYTI  ES YL+++ VPA+G   +L++ F+ YG +E+   +D     +FT+VY +KF  + +AR AKRK+DE  F G  L V YAPEFE+
Subjt:  RHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFES

Query:  LFDTKEKLEARRREV
        + +T++KL  R   V
Subjt:  LFDTKEKLEARRREV

Q561R3 RNA-binding protein 487.9e-2244.64Show/hide
Query:  RHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFES
        R    P AV+VYTI  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D     +FT+VY +KF  + +AR AK+K+DE  F G  L V YAPEFE+
Subjt:  RHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFES

Query:  LFDTKEKLEARR
        + +T++KLE R+
Subjt:  LFDTKEKLEARR

Q5R4U2 RNA-binding protein 482.7e-2234.6Show/hide
Query:  RHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFES
        R    P AV+VYTI  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D     +FT+VY +KF  + +AR AKRK+DE  F G  L V YAPEFE+
Subjt:  RHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFES

Query:  LFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAAL-----ISNPHVSQITRVSSDQDYFPSASMNQTVRLVRG
        + +T++KL+ R+  V+  +E+          T  KL           Q    E   +  AAL      SNP++     +     YF S  M  +    RG
Subjt:  LFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAAL-----ISNPHVSQITRVSSDQDYFPSASMNQTVRLVRG

Query:  KLDKIESSSKN
         +D+   SSK+
Subjt:  KLDKIESSSKN

Q8K2X2 RNA-binding protein 482.3e-2143.75Show/hide
Query:  RHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFES
        R    P AV+VYTI  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D     +FT+VY +KF  + +AR AK+K+DE  F G  L V YAPEFE+
Subjt:  RHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFES

Query:  LFDTKEKLEARR
        + +T++KL+ R+
Subjt:  LFDTKEKLEARR

Arabidopsis top hitse value%identityAlignment
AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.5e-6554.62Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        M R+ DE PAVRVYT+CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+CAEFTDVY++KF L++NARFAKRKLDE  FLGN+LQ+SYAPE+
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        E++ DTK+KLE+RR+EVLAR     P+    +S  +KLA  + +Q      +S ++R         N   + +TRVSSDQ+YF S+SMNQTV+ VR KL+
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSK-----------------------NLQTEPVIKKSRVDNRRRI
        KIE S                         + Q +P +K++RVDNRRRI
Subjt:  KIESSSK-----------------------NLQTEPVIKKSRVDNRRRI

AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.5e-6554.62Show/hide
Query:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF
        M R+ DE PAVRVYT+CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+CAEFTDVY++KF L++NARFAKRKLDE  FLGN+LQ+SYAPE+
Subjt:  MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEF

Query:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD
        E++ DTK+KLE+RR+EVLAR     P+    +S  +KLA  + +Q      +S ++R         N   + +TRVSSDQ+YF S+SMNQTV+ VR KL+
Subjt:  ESLFDTKEKLEARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLD

Query:  KIESSSK-----------------------NLQTEPVIKKSRVDNRRRI
        KIE S                         + Q +P +K++RVDNRRRI
Subjt:  KIESSSK-----------------------NLQTEPVIKKSRVDNRRRI

AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein1.1e-5555.96Show/hide
Query:  TICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFESLFDTKEKLEARR
        ++CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+CAEFTDVY++KF L++NA    RKLDE  FLGN+LQ+SYAPE+ES+ DTKEKLE RR
Subjt:  TICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFESLFDTKEKLEARR

Query:  REVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLDKIESSSK------N
        +EVLAR     P  +  +S  +KLA  + +Q       S  +R         N   + +TRVSS Q+YF S+SMNQ V+ VR KL+KIE S        +
Subjt:  REVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLDKIESSSK------N

Query:  LQTEPVIKKSRVDNRRRI
         QT+P  K++RVDNRRRI
Subjt:  LQTEPVIKKSRVDNRRRI

AT5G27300.2 pentatricopeptide (PPR) repeat-containing protein1.1e-5555.96Show/hide
Query:  TICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFESLFDTKEKLEARR
        ++CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+CAEFTDVY++KF L++NA    RKLDE  FLGN+LQ+SYAPE+ES+ DTKEKLE RR
Subjt:  TICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFESLFDTKEKLEARR

Query:  REVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLDKIESSSK------N
        +EVLAR     P  +  +S  +KLA  + +Q       S  +R         N   + +TRVSS Q+YF S+SMNQ V+ VR KL+KIE S        +
Subjt:  REVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLDKIESSSK------N

Query:  LQTEPVIKKSRVDNRRRI
         QT+P  K++RVDNRRRI
Subjt:  LQTEPVIKKSRVDNRRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCCATACAGATGAGCCCCCTGCAGTTCGTGTCTATACGATTTGCGACGAGTCGAGGTACTTGATTGTGAGGAATGTCCCGGCGTTGGGTTGTGGAGATGACTT
GCTCAAATTGTTCTCCTCCTACGGAAACGTTGAAGAGTGTAAACCAATGGATGCTGAAGAATGTGCTGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTTAGCA
ATGCCAGGTTTGCAAAAAGGAAATTGGATGAGTTTGTTTTCCTTGGTAATCAGCTGCAAGTCTCTTATGCTCCCGAGTTCGAAAGCTTGTTTGATACAAAGGAAAAGCTG
GAAGCTAGGAGACGAGAAGTTTTAGCACGATCAGAGTCCGGAAGACCAAGAGGATCAACAGTTAGTTCAACCACCTCAAAGTTGGCAAATACTTCTCATTCTCAGCATAC
CCTTGAACAGAAGATCTCTCGTGAAAAGAGGAGTTATGGAGATGCAGCACTCATTTCCAACCCACACGTTTCTCAAATAACAAGAGTTTCCTCCGACCAGGATTACTTTC
CGTCTGCATCTATGAATCAAACCGTGCGTCTCGTCAGGGGAAAGCTTGATAAGATTGAATCAAGCAGCAAAAATCTGCAAACTGAACCCGTGATCAAGAAATCACGTGTG
GACAATAGGAGAAGAATCTAA
mRNA sequenceShow/hide mRNA sequence
AAATATAAACAGAATATTCCCCTTAAATCAGCAAAGAGTAGTTTGATAAAGGAATAATAAACCTGAGAGAAGCTTCGTGAAAATGCAGATTTTGCGCAAAATCTCTTCGA
TTCCAATCCTAAGGAACAATTTCACAAATGATCCTGAAAAGAAATCCCATTCAAAGTTATAGCAAAAAGCTTTTCAAGAATTAAAGCTGTAGTTGTCACTGTCGGATTCC
TTGACGGAAATAGAGATCTGCGCGATAGAGATTAACTGCCTTGTGAATTGGAATTCCGAGTGTAGACGACGTGTACAGGGATGCCTCGCCATACAGATGAGCCCCCTGCA
GTTCGTGTCTATACGATTTGCGACGAGTCGAGGTACTTGATTGTGAGGAATGTCCCGGCGTTGGGTTGTGGAGATGACTTGCTCAAATTGTTCTCCTCCTACGGAAACGT
TGAAGAGTGTAAACCAATGGATGCTGAAGAATGTGCTGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTTAGCAATGCCAGGTTTGCAAAAAGGAAATTGGATG
AGTTTGTTTTCCTTGGTAATCAGCTGCAAGTCTCTTATGCTCCCGAGTTCGAAAGCTTGTTTGATACAAAGGAAAAGCTGGAAGCTAGGAGACGAGAAGTTTTAGCACGA
TCAGAGTCCGGAAGACCAAGAGGATCAACAGTTAGTTCAACCACCTCAAAGTTGGCAAATACTTCTCATTCTCAGCATACCCTTGAACAGAAGATCTCTCGTGAAAAGAG
GAGTTATGGAGATGCAGCACTCATTTCCAACCCACACGTTTCTCAAATAACAAGAGTTTCCTCCGACCAGGATTACTTTCCGTCTGCATCTATGAATCAAACCGTGCGTC
TCGTCAGGGGAAAGCTTGATAAGATTGAATCAAGCAGCAAAAATCTGCAAACTGAACCCGTGATCAAGAAATCACGTGTGGACAATAGGAGAAGAATCTAAAGCATGCTA
ACACCTTTATAGAGAATGGCTACCGGGTGCCATTACGTTGTATCAAAGTTATTTTGGAACATCACAGATATGCAGGCTTTTGCAGCGTCCATATATGACAGTTGATCTTT
TAGTACAATGGTGAAAATGGAACAGATACACCAAAGTTCTGTAGGGAGAGTTTTTGTTGACATTAAAAAAGTTGTTCTTCTCATCAAATGGAGCCTATATTTTTACACAA
ATAAGGAGCCATAAGAAGTGAGGCATCTAGAACTTCTTGTGGAGATCTTTACTTGTCTTGATAAATCCTAGAGTTCATTTCATTCCAAATCTTCCAAACAACCACTCTTA
TGATATGCCATAGTGTATTCTTTATTCTCTTGAAAGGATGGTTTCTAAGCATCTTCCCTAGCCTATCCAAATTCAAAATCTCTGATGGAGAAACTACATTCCAACCTTAG
GCGCCAGATTTTTTTGCGTGTAGTAGCAACGGCTGAAAATGTGGCATTGAGATTCTCTTGCCTCCTTGCAAAGGCAGGCCTGTTGGGGAAAAATATGCACATTCCAAAAT
TTCATATTTTTGTAGGTTTATTTGAAAATTCAAAATCCAAGAGCAATTTGTCTTGTCCCAAACGTCTGCAATGGAGCTCTGTTTCTGATATAGCTTACAATTAATTGAGG
CCTTTGTTCCCAATCCATCGATCATTGATCTCTCCCATCACCACCAACTTTGCTGTGAATGTTTCTGAAAATAAGGTCACTGCGCTTACGAATAAAGCTCCATTCGTGGG
CTTCTTTTTAATGAAGGGCTGGTTCGAGATCAAAGTGGTGAGATCCAAATTTTGTTTGTATCACTTTCTCCATATACCTCTTTTTTAGGACAAAATCTCTATGTAAGACT
TAAGAGAGCTCTGTTCTGCATTCTCAAGTCTATGATATCAAGCCCTCCTTCCAAAGTTCACCGTATCCGGTCGGATGAAATGAGATAAACCCATTTAAGACCATAGAAAT
TTCTTGAGGCTCTTTGAATGAGGTCTGCAACTTTTGAAGGGAAGAGTGAACCTTTTGATAAGAGATTGTGATGCCAAGAATGAAGCCTCTGTCAGTTTTGTCTGCAATGG
GTTGTGAAAAAGATAAAGCTATAGAGTTACCAGTCACCTATTCAGGGAAGATCCAGCCAATATGAGCAGTCGCTCAGAAACATTAGTGTACATCCAATGATCAAGATTTG
GGTAAGTCTCGGACAACTTCACTGGTGAACCAAAAATTTCGGATTTGTGCCAGAAGCTTTCTTTTTCCAAGAGTCTGTAATGTGTTTTTGTAAGAGGCCAAGGAAAGCAG
CCTACTAAAATTACTCCATCCATAGAAATGATGAGTTGAGAACTCTTTAGATTTTGGTGCAAGTGCTATGGAGTTTCCAGATGTGGATTATGAGCTATCAGAGCTTAATT
CAGCACTAATTGGTTGTAAGTTCAAATTCTCAAATAGTCAAATCCCTAATATTGTTGTTGAACTCAAAGAAGTTTGGATATTTCAGTTTATGGTTTATGCC
Protein sequenceShow/hide protein sequence
MPRHTDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECAEFTDVYFVKFHLVSNARFAKRKLDEFVFLGNQLQVSYAPEFESLFDTKEKL
EARRREVLARSESGRPRGSTVSSTTSKLANTSHSQHTLEQKISREKRSYGDAALISNPHVSQITRVSSDQDYFPSASMNQTVRLVRGKLDKIESSSKNLQTEPVIKKSRV
DNRRRI