; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0009927 (gene) of Chayote v1 genome

Gene IDSed0009927
OrganismSechium edule (Chayote v1)
DescriptionRNA-binding protein Y14-like
Genome locationLG12:25188780..25200839
RNA-Seq ExpressionSed0009927
SyntenySed0009927
Gene Ontology termsGO:0008380 - RNA splicing (biological process)
GO:0010628 - positive regulation of gene expression (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR008111 - RNA-binding motif protein 8
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR033744 - RBM8, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139049.1 RNA-binding protein Y14 [Cucumis sativus]1.4e-9694.92Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASS+L   PKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FGEFGEIKNLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDGAELLTQIINVDWAFS GPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

XP_022154366.1 RNA-binding protein Y14A [Momordica charantia]4.5e-9594.42Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASS+L A PKKTKGRGFR ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FGEFGEIKNLHLNLDRRTGFVKGYALIEYE+FEEAE+AISAMDG+ELLTQIINVDWAFS GPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

XP_022961208.1 RNA-binding protein Y14-like [Cucurbita moschata]4.0e-9693.91Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASS+L   PKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FGEFGEI+NLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDG+ELLTQIINVDWAFS GPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

XP_022988215.1 RNA-binding protein Y14A-like [Cucurbita maxima]1.2e-9593.91Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASS+L   PKKTKGRGFRQESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FGEFGEI+NLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDG+ELLTQIINVDWAFS GPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

XP_038880227.1 RNA-binding protein Y14A [Benincasa hispida]1.4e-9694.92Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASS+L   PKKTKGRGFR ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FG+FGEIKNLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDGAELLTQIINVDWAFS GPIRRKNTRPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

TrEMBL top hitse value%identityAlignment
A0A0A0M2V3 RRM domain-containing protein6.7e-9794.92Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASS+L   PKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FGEFGEIKNLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDGAELLTQIINVDWAFS GPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

A0A1S3BNH9 RNA-binding protein 8A-B6.7e-9794.92Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASS+L   PKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FGEFGEIKNLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDGAELLTQIINVDWAFS GPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

A0A6J1DNH7 RNA-binding protein Y14A2.2e-9594.42Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASS+L A PKKTKGRGFR ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FGEFGEIKNLHLNLDRRTGFVKGYALIEYE+FEEAE+AISAMDG+ELLTQIINVDWAFS GPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

A0A6J1HB67 RNA-binding protein Y14-like2.0e-9693.91Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASS+L   PKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FGEFGEI+NLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDG+ELLTQIINVDWAFS GPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

A0A6J1JIZ0 RNA-binding protein Y14A-like5.7e-9693.91Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASS+L   PKKTKGRGFRQESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILV 
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVN

Query:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQN+FGEFGEI+NLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDG+ELLTQIINVDWAFS GPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY

SwissProt top hitse value%identityAlignment
B7FAL5 RNA-binding protein Y14A1.8e-6265.85Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPA--SPKKTKGRGFRQE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE
        + +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I GG           +KTKGRGFR + + R++RLAG    SDFDSL S  GPGP RSIE
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPA--SPKKTKGRGFRQE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE

Query:  GWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRS-
        GWI+LV GVHEEAQEDDL N F +FG++KNLHLNLDRRTGFVKGYALIEYE FEEA+ AI A+DG ELLTQII+VDWAFS GP++R+N R    RRSRS 
Subjt:  GWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRS-

Query:  PRRRY
        PRRRY
Subjt:  PRRRY

F4I9J7 RNA-binding protein Y146.5e-6567.96Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    A   S KKTKGRGFR+E  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGP-----IRRKNTRPARERRSR
        ILV+GVHEE QE+D+ N+FG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGP-----IRRKNTRPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

Q5D018 RNA-binding protein 8A1.2e-3755.41Show/hide
Query:  LPASPKKTKGRGFRQESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEE
        L    KK KGRGF  E    +R+   D+D++ +  D PGPQRS+EGWI+ V GVHEEA E+D+ + F EFGEIKNLHLNLDRRTG++KGYAL+EYE ++E
Subjt:  LPASPKKTKGRGFRQESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEE

Query:  AEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRR
        A+ A+  ++G EL+ Q I+VDW F +GP   K+ R    RRSRSP RR
Subjt:  AEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRR

Q6ATR0 RNA-binding protein Y14B6.2e-3948.5Show/hide
Query:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGP--GPQRSIEGWI
        A+ DVE VD+   E EE+D MDED           P P +        S  +  S  +  GR     +    R     FDSL  A  P  GPQRSIEGWI
Subjt:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGP--GPQRSIEGWI

Query:  ILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRR
        +LV+GV E+A+EDDL N+F +FG +K+LHLNL+RRTG+ KGYAL+EYE+FEEA+ AI AM+G +LLT+ + VDWAFS+GPI++  +     RRSR+P RR
Subjt:  ILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRR

Q6PH90 RNA-binding protein 8A-B5.8e-3749.48Show/hide
Query:  ADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVNGV
        ADV  +     ED  MDEDG    D S      KLK               KK KGRGF  +    TR+   D+DS+ +  D PGPQRS+EGWI+ V GV
Subjt:  ADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVNGV

Query:  HEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRR
        HEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE ++EA  A+  ++G +L+ Q ++VDW F +GP   K  R +  RRSRSP RR
Subjt:  HEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRR

Arabidopsis top hitse value%identityAlignment
AT1G51510.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.7e-6667.96Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    A   S KKTKGRGFR+E  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGP-----IRRKNTRPARERRSR
        ILV+GVHEE QE+D+ N+FG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGP-----IRRKNTRPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

AT5G52040.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.5e-0829.25Show/hide
Query:  GRGFRQESDRNTR-LAGSDFDSLKSADGPGPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMD
        GR  R E  +N R  AG    S +S+ G  P ++    + ++N   +  +  DL+  F  +G+I N+ +         + +A I+YE  E+A +A+ A +
Subjt:  GRGFRQESDRNTR-LAGSDFDSLKSADGPGPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMD

Query:  GAELLTQIINVDWAFSQ--------GPIRRKNTRPARERRSRSPRRR
         ++L+ ++I+V++A            P RR++  P R RRS SP RR
Subjt:  GAELLTQIINVDWAFSQ--------GPIRRKNTRPARERRSRSPRRR

AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.5e-0829.25Show/hide
Query:  GRGFRQESDRNTR-LAGSDFDSLKSADGPGPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMD
        GR  R E  +N R  AG    S +S+ G  P ++    + ++N   +  +  DL+  F  +G+I N+ +         + +A I+YE  E+A +A+ A +
Subjt:  GRGFRQESDRNTR-LAGSDFDSLKSADGPGPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMD

Query:  GAELLTQIINVDWAFSQ--------GPIRRKNTRPARERRSRSPRRR
         ++L+ ++I+V++A            P RR++  P R RRS SP RR
Subjt:  GAELLTQIINVDWAFSQ--------GPIRRKNTRPARERRSRSPRRR

AT5G64200.1 ortholog of human splicing factor SC352.6e-0831.15Show/hide
Query:  GPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWA--------FSQG---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A         S+G   
Subjt:  GPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWA--------FSQG---

Query:  --PIRRKNTRPARERRSRSPRR
          P + + +R    RRSRSPRR
Subjt:  --PIRRKNTRPARERRSRSPRR

AT5G64200.2 ortholog of human splicing factor SC352.6e-0831.15Show/hide
Query:  GPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWA--------FSQG---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A         S+G   
Subjt:  GPQRSIEGWIILVNGVHEEAQEDDLQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWA--------FSQG---

Query:  --PIRRKNTRPARERRSRSPRR
          P + + +R    RRSRSPRR
Subjt:  --PIRRKNTRPARERRSRSPRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGCCGATGTTGAGGCTGTGGACTTCGAGCCCGAGGAAGACGACCTCATGGACGAGGACGGAGCCGCCGAAGCCGACGCCTCCCCTCGAGCTCCTTTTCCCAA
GCTCAAATCCGCCATCACCGGCGGCGCATCCTCCGCCCTTCCGGCTAGTCCCAAGAAGACCAAGGGCCGTGGATTTCGTCAAGAATCTGATCGGAACACCCGCCTTGCCG
GCTCCGACTTCGATTCCCTCAAGTCTGCTGACGGCCCTGGCCCCCAGCGATCTATTGAAGGATGGATCATTCTGGTGAACGGTGTACATGAAGAGGCACAGGAGGATGAC
CTACAAAATTCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATTTAAATCTCGATCGCCGTACTGGTTTTGTCAAGGGATATGCGTTGATCGAATATGAAAATTTTGA
GGAAGCAGAAAAGGCAATATCTGCCATGGATGGAGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCAAGGACCCATCAGAAGGAAGAACACAAGGC
CGGCTCGGGAACGACGTTCGAGGAGCCCTAGGAGGAGATATTGA
mRNA sequenceShow/hide mRNA sequence
CTGAAACATGTAAACCCTAAAAGGAAAATAAAAGTAAATGAGAATAAATTTGGGTTAGCGGGCAAGGAAGAAAGAAACCCTCGTTCCCATCCCCAAAACCCCCACACCAT
TCCCATCTTCTTCCCGAACCGAGAATGGCGAGCGCCGATGTTGAGGCTGTGGACTTCGAGCCCGAGGAAGACGACCTCATGGACGAGGACGGAGCCGCCGAAGCCGACGC
CTCCCCTCGAGCTCCTTTTCCCAAGCTCAAATCCGCCATCACCGGCGGCGCATCCTCCGCCCTTCCGGCTAGTCCCAAGAAGACCAAGGGCCGTGGATTTCGTCAAGAAT
CTGATCGGAACACCCGCCTTGCCGGCTCCGACTTCGATTCCCTCAAGTCTGCTGACGGCCCTGGCCCCCAGCGATCTATTGAAGGATGGATCATTCTGGTGAACGGTGTA
CATGAAGAGGCACAGGAGGATGACCTACAAAATTCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATTTAAATCTCGATCGCCGTACTGGTTTTGTCAAGGGATATGC
GTTGATCGAATATGAAAATTTTGAGGAAGCAGAAAAGGCAATATCTGCCATGGATGGAGCTGAACTTCTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCAAGGAC
CCATCAGAAGGAAGAACACAAGGCCGGCTCGGGAACGACGTTCGAGGAGCCCTAGGAGGAGATATTGATTTTGGGGTGTACAACTCCATGTGTGTGGTTTATGAATTTTA
TTTGGAAAATGTGTTTTCTTGTGGATTGGACGGAGATGTTTCTGCTCGGCTCTTATTTATTTTTTCTTGAACTTCGATTTGGACTGATGTGTATCTAACTTCGAAAACCT
GAGGGTTATGATTTTTCCTTTTCTTTTTGGATTACTTGAGCTATGTCTTTTTGCGTTGATACCTGCTATTATATAATATATATATATATATATATATATATAT
Protein sequenceShow/hide protein sequence
MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSALPASPKKTKGRGFRQESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVNGVHEEAQEDD
LQNSFGEFGEIKNLHLNLDRRTGFVKGYALIEYENFEEAEKAISAMDGAELLTQIINVDWAFSQGPIRRKNTRPARERRSRSPRRRY