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Sed0009961 (gene) of Chayote v1 genome

Gene IDSed0009961
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG01:3421172..3423498
RNA-Seq ExpressionSed0009961
SyntenySed0009961
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY50117.1 hypothetical protein CUMW_124260, partial [Citrus unshiu]1.8e-1481.13Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
        MF    FRSFP+VIGAVIIGVVSGKAIFGPPLDEYWRKK+ EEAAAKDS   S
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
KAG7035190.1 hypothetical protein SDJN02_01985, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-1583.02Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
        M  R  F SFP+VIGAVIIGVVSGKAIFGPPLDEYWRKK+DEEA AKDSGTT+
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
PNT26302.1 hypothetical protein POPTR_007G006700 [Populus trichocarpa]8.3e-1579.63Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSS
        MF R  F SFPLVIGAVIIGVVSGKAIFGPPLDEYW+KK+DEEAAAK++ T+S+
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSS
XP_022149438.1 uncharacterized protein LOC111017867 [Momordica charantia]1.1e-1477.78Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSS
        MF R  F SFP+VIGAVIIGVVSGKAIFGPPLDEYW+KK++EEA AK +GT+SS
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSS
XP_034690058.1 uncharacterized protein LOC117917777 [Vitis riparia]2.4e-1477.36Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
        MF RR F SFPLVIGAV+IGVVSGKAIFGPPLDEYW+KK+ EEAAAK++  +S
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
TrEMBL top hitse value%identityAlignment
A0A2H5PCM6 Uncharacterized protein (Fragment)8.9e-1581.13Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
        MF    FRSFP+VIGAVIIGVVSGKAIFGPPLDEYWRKK+ EEAAAKDS   S
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
A0A5D3BMY9 Uncharacterized protein1.5e-1472.73Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSSS
        M  R  F SFP+V+GAVIIGVVSGKAIFGPPLDEYW+KK++EEAAAK++GT+++S
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSSS
A0A6J1D6S8 uncharacterized protein LOC1110178675.2e-1577.78Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSS
        MF R  F SFP+VIGAVIIGVVSGKAIFGPPLDEYW+KK++EEA AK +GT+SS
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSS
D6CH05 Uncharacterized protein1.2e-1477.36Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
        MF RR F SFPLVIGAV+IGVVSGKAIFGPPLDEYW+KK+ EEAAAK++  +S
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTS
U5GB04 Uncharacterized protein4.0e-1579.63Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSS
        MF R  F SFPLVIGAVIIGVVSGKAIFGPPLDEYW+KK+DEEAAAK++ T+S+
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65880.1 unknown protein3.7e-1361.4Show/hide
Query:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAA--AKDSGTTSSS
        MF R  F S P+VIGAV+IGVVSGKAIFGPPLD+YW++K++ E A  AK+     SS
Subjt:  MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAA--AKDSGTTSSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAGTCGAAGAAGTTTCCGCTCGTTTCCCTTGGTAATTGGCGCTGTTATCATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAG
AAAGAAGATGGATGAAGAGGCGGCTGCAAAGGATTCAGGTACTACTAGCTCGAGTTAG
mRNA sequenceShow/hide mRNA sequence
AAGATAAATAGTAACCATAACTATAGGTGTAGACAGTCAAATAGATTTAAAGAGTTAATCCTAATAACATAATCACCTCGACAATAGGAATTCTCCAAACTAAAACACAA
AGTAATTTCAAAATCATACAGAAATTACATCTTTAAATATTTTACAAATTTATTGGGTTGTATTCTTGTGTGTAAAATAATCCAAACCACTCTAAACCCCTTTTATTTTT
CCTGCCTCTCCCCTGATCTTCCCCAAATGAAACCCTAAACCCTAAAATCTTAATTTAAAAAAACCTCCGTTCGAAGAAGGAGTAATCTTCGAGAAACAGGCAGGTTATAA
ACCCATATCCAAAACAGATTTGTAATTACCAATTTTGATTCACCATGTTCAGTCGAAGAAGTTTCCGCTCGTTTCCCTTGGTAATTGGCGCTGTTATCATTGGTGTTGTT
TCTGGGAAAGCAATATTTGGGCCACCTCTTGATGAATACTGGAGAAAGAAGATGGATGAAGAGGCGGCTGCAAAGGATTCAGGTACTACTAGCTCGAGTTAGCTTAGGCC
AGGGTAGTCATGTTTAGCAACATGAATATGCAGCAATTGGAAAATATTCTTTCTGGAATAATTATTGAATATGTATAATTTACATGGATATTTAAGAATCTGTTCTTTAG
GTTGGGTACAACTATATCCTTGATTTGTTGAATCCTTGAATTCTAAGATTTGGATACCAAAGCTGCCTTCCTTTATTTATGACACTGACAAAAAATGGGAGTTCAGGTCA
TGAGTGATGGTCTTTTTAATGCATCCTTGTTTATGAAGGTGGATCAAAGGATAGTAAATTGAAGAAAAATATACTTAAATTTTAGAACAGTACAATCAAAATCATGAATA
TCATACTCAAGGGGAGTCTTTTACGGGTACAATGGAATCTGGTTATGTGTTTGCATAATCTGACTCTATTTAATGGAGTTTCTTATTGAGTATTTAATACTCACCCTTTT
CGGAACTCTTAGGGGTTGTTTGTTTGACATATTTAGGTAGGATTTAGCTTAAGGAGTTATATTGAAGAGTTATGTTGAGTAATTAAAAATTGAGAATGGCAG
Protein sequenceShow/hide protein sequence
MFSRRSFRSFPLVIGAVIIGVVSGKAIFGPPLDEYWRKKMDEEAAAKDSGTTSSS