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Sed0009997 (gene) of Chayote v1 genome

Gene IDSed0009997
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor PAR2-like
Genome locationLG05:32161914..32162525
RNA-Seq ExpressionSed0009997
SyntenySed0009997
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140253.1 transcription factor PAR2 [Cucumis sativus]2.4e-2968.25Show/hide
Query:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RIA--------------ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MD+ Q   LK + T+SR K+LILNALHKSSL RRR   R  T RIA               DEK+AV+RKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RIA--------------ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSTFFESLETEKCNRGG
        QHQVKAMRALS+FFESLE EK   GG
Subjt:  QHQVKAMRALSTFFESLETEKCNRGG

XP_008449537.1 PREDICTED: transcription factor PAR2-like [Cucumis melo]3.1e-2967.72Show/hide
Query:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RI---------------AADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMN
        MD+ Q   LK + T+SR K+LILNALHKSSL RRR   R  T RI                ADEK+AV+RKIRALQSIVPGGESLGVDKLFEQTAEYIMN
Subjt:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RI---------------AADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMN

Query:  LQHQVKAMRALSTFFESLETEKCNRGG
        LQHQVKAMRALS+FFESLE EK   GG
Subjt:  LQHQVKAMRALSTFFESLETEKCNRGG

XP_022930688.1 transcription factor PAR2-like [Cucurbita moschata]1.8e-2970.25Show/hide
Query:  MDESQVHPLKPA-----ATSSRSKSLILNALHKSSLPR--RRRTCRKSTRIA---ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVK
        M +SQ+  LK A      T+ R K+LILNALHKS L R  RRR   K TRIA   A+EK+AV+RKIRALQ+IVPGGESLGVDKLFEQTAEYIMNLQHQVK
Subjt:  MDESQVHPLKPA-----ATSSRSKSLILNALHKSSLPR--RRRTCRKSTRIA---ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVK

Query:  AMRALSTFFESLETEKCNRGG
        AMRALS+FFESLE EK   GG
Subjt:  AMRALSTFFESLETEKCNRGG

XP_022989200.1 transcription factor PAR2-like [Cucurbita maxima]1.1e-2970.25Show/hide
Query:  MDESQVHPLKPA-----ATSSRSKSLILNALHKSSLPR--RRRTCRKSTRIA---ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVK
        M +SQ+  LK A      T+ R K+LILNALHKS L R  RRR+  K TRIA   A+EK+AV+RKIRALQ+IVPGGESLGVDKLFEQTAEYIMNLQHQVK
Subjt:  MDESQVHPLKPA-----ATSSRSKSLILNALHKSSLPR--RRRTCRKSTRIA---ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVK

Query:  AMRALSTFFESLETEKCNRGG
        AMRALS+FFESLE EK   GG
Subjt:  AMRALSTFFESLETEKCNRGG

XP_038887982.1 transcription factor PAR1-like [Benincasa hispida]4.4e-3169.84Show/hide
Query:  MDESQVHPLKPAATSSRSKSLILNALHKSS-LPRRRRTCRKSTRIA--------------ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MD+SQ+  LKP  T+SR K+LILNALHKSS L RR R    +TRIA              ADEK+AV+RKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDESQVHPLKPAATSSRSKSLILNALHKSS-LPRRRRTCRKSTRIA--------------ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSTFFESLETEKCNRGG
        QHQVKAMRALS+FFESLE EK   GG
Subjt:  QHQVKAMRALSTFFESLETEKCNRGG

TrEMBL top hitse value%identityAlignment
A0A0A0KGU6 Uncharacterized protein1.2e-2968.25Show/hide
Query:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RIA--------------ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MD+ Q   LK + T+SR K+LILNALHKSSL RRR   R  T RIA               DEK+AV+RKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RIA--------------ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSTFFESLETEKCNRGG
        QHQVKAMRALS+FFESLE EK   GG
Subjt:  QHQVKAMRALSTFFESLETEKCNRGG

A0A1S3BM86 transcription factor PAR2-like1.5e-2967.72Show/hide
Query:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RI---------------AADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMN
        MD+ Q   LK + T+SR K+LILNALHKSSL RRR   R  T RI                ADEK+AV+RKIRALQSIVPGGESLGVDKLFEQTAEYIMN
Subjt:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RI---------------AADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMN

Query:  LQHQVKAMRALSTFFESLETEKCNRGG
        LQHQVKAMRALS+FFESLE EK   GG
Subjt:  LQHQVKAMRALSTFFESLETEKCNRGG

A0A5A7V5C4 Transcription factor PAR2-like1.5e-2967.72Show/hide
Query:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RI---------------AADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMN
        MD+ Q   LK + T+SR K+LILNALHKSSL RRR   R  T RI                ADEK+AV+RKIRALQSIVPGGESLGVDKLFEQTAEYIMN
Subjt:  MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKST-RI---------------AADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMN

Query:  LQHQVKAMRALSTFFESLETEKCNRGG
        LQHQVKAMRALS+FFESLE EK   GG
Subjt:  LQHQVKAMRALSTFFESLETEKCNRGG

A0A6J1EW23 transcription factor PAR2-like8.9e-3070.25Show/hide
Query:  MDESQVHPLKPA-----ATSSRSKSLILNALHKSSLPR--RRRTCRKSTRIA---ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVK
        M +SQ+  LK A      T+ R K+LILNALHKS L R  RRR   K TRIA   A+EK+AV+RKIRALQ+IVPGGESLGVDKLFEQTAEYIMNLQHQVK
Subjt:  MDESQVHPLKPA-----ATSSRSKSLILNALHKSSLPR--RRRTCRKSTRIA---ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVK

Query:  AMRALSTFFESLETEKCNRGG
        AMRALS+FFESLE EK   GG
Subjt:  AMRALSTFFESLETEKCNRGG

A0A6J1JLR0 transcription factor PAR2-like5.2e-3070.25Show/hide
Query:  MDESQVHPLKPA-----ATSSRSKSLILNALHKSSLPR--RRRTCRKSTRIA---ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVK
        M +SQ+  LK A      T+ R K+LILNALHKS L R  RRR+  K TRIA   A+EK+AV+RKIRALQ+IVPGGESLGVDKLFEQTAEYIMNLQHQVK
Subjt:  MDESQVHPLKPA-----ATSSRSKSLILNALHKSSLPR--RRRTCRKSTRIA---ADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVK

Query:  AMRALSTFFESLETEKCNRGG
        AMRALS+FFESLE EK   GG
Subjt:  AMRALSTFFESLETEKCNRGG

SwissProt top hitse value%identityAlignment
Q9LXR7 Transcription factor PAR21.2e-1040.4Show/hide
Query:  NALHKSSLPRRRRTCRKSTRIAA-----------DEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFESLETEKCNRGG
        +A++ SS    RRT ++ +   A           ++++ V+ KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ L+TF E  E +    GG
Subjt:  NALHKSSLPRRRRTCRKSTRIAA-----------DEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFESLETEKCNRGG

Q9SJH0 Transcription factor PAR11.8e-1137.5Show/hide
Query:  LKPAATSS-RSKSLILNALHKSSLPRRRRTCRKSTRIAADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFESLETEKC
        L P+ +++ +S++       K  L     + R+    A +E+D V  KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L++F + ++ E  
Subjt:  LKPAATSS-RSKSLILNALHKSSLPRRRRTCRKSTRIAADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFESLETEKC

Query:  NRGG
          GG
Subjt:  NRGG

Arabidopsis top hitse value%identityAlignment
AT2G42870.1 phy rapidly regulated 11.3e-1237.5Show/hide
Query:  LKPAATSS-RSKSLILNALHKSSLPRRRRTCRKSTRIAADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFESLETEKC
        L P+ +++ +S++       K  L     + R+    A +E+D V  KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L++F + ++ E  
Subjt:  LKPAATSS-RSKSLILNALHKSSLPRRRRTCRKSTRIAADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFESLETEKC

Query:  NRGG
          GG
Subjt:  NRGG

AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators4.9e-0437.93Show/hide
Query:  RKSTRIAADEKDAVDRKIRALQSIVPGGE-SLGVDKLFEQTAEYIMNLQHQVKAMRAL
        RKS   +     A+ R+++ L+ +VP  + S G+D LF QTA+YI+ L+ +VK M+ +
Subjt:  RKSTRIAADEKDAVDRKIRALQSIVPGGE-SLGVDKLFEQTAEYIMNLQHQVKAMRAL

AT3G05800.1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 11.7e-0433.33Show/hide
Query:  AATSSRSKSLILNALHKSSLPRRRRTCRKSTRIAA----------DEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFES
        A  ++R    IL +   +SL RRR T   S   AA           +  AV  ++R L  +VPG     + +L ++TA+YI  L+ QV+AM ALS     
Subjt:  AATSSRSKSLILNALHKSSLPRRRRTCRKSTRIAA----------DEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFES

Query:  LE
        L+
Subjt:  LE

AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.4e-0432.31Show/hide
Query:  RKSTRIAAD--------EKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRAL
        RK+ +I+ D         ++ +  KIR LQ++VPGG  +    + ++ A Y+  L+ QVKA+  L
Subjt:  RKSTRIAAD--------EKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRAL

AT3G58850.1 phy rapidly regulated 28.3e-1240.4Show/hide
Query:  NALHKSSLPRRRRTCRKSTRIAA-----------DEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFESLETEKCNRGG
        +A++ SS    RRT ++ +   A           ++++ V+ KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ L+TF E  E +    GG
Subjt:  NALHKSSLPRRRRTCRKSTRIAA-----------DEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFESLETEKCNRGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGTCTCAAGTCCACCCGCTCAAACCAGCCGCCACCTCCAGCCGCTCCAAATCCCTAATCCTCAACGCATTGCACAAATCCTCCCTCCCCCGCCGCCGCCGCAC
CTGCCGGAAATCCACCCGCATTGCCGCCGACGAGAAGGACGCCGTCGACCGCAAGATTCGCGCCTTGCAGAGCATCGTCCCCGGAGGAGAGTCGCTCGGAGTTGATAAGC
TCTTCGAACAGACGGCGGAGTATATTATGAATTTGCAGCATCAGGTGAAAGCCATGAGAGCGCTCTCTACCTTTTTCGAGAGCTTGGAGACCGAGAAATGCAACCGCGGA
GGTTGA
mRNA sequenceShow/hide mRNA sequence
CCTCCTTCATCTCTACCCATTCTTCTCTTCTCGGTTTGCAGTGCAGCCATGGACGAGTCTCAAGTCCACCCGCTCAAACCAGCCGCCACCTCCAGCCGCTCCAAATCCCT
AATCCTCAACGCATTGCACAAATCCTCCCTCCCCCGCCGCCGCCGCACCTGCCGGAAATCCACCCGCATTGCCGCCGACGAGAAGGACGCCGTCGACCGCAAGATTCGCG
CCTTGCAGAGCATCGTCCCCGGAGGAGAGTCGCTCGGAGTTGATAAGCTCTTCGAACAGACGGCGGAGTATATTATGAATTTGCAGCATCAGGTGAAAGCCATGAGAGCG
CTCTCTACCTTTTTCGAGAGCTTGGAGACCGAGAAATGCAACCGCGGAGGTTGACGAAGAAGAACAAGATGAGTTTTACTGATTTTTTTTCTTCTTTTTTTTTTTTATTT
TCTTTCTCTGTTAGTTGTGGAGTAGGATTTCCAATCTTTTTTTTTTTTTTAATATTTTTTTTCTTTCCTGTTTATGATCACCATCATCATTGAATCAGTGTAACTTTCTA
ATGAAATAGAAAATCAAATTCCACATGGATATAGAGAGTATTATTTACAAATTAATGTGGAC
Protein sequenceShow/hide protein sequence
MDESQVHPLKPAATSSRSKSLILNALHKSSLPRRRRTCRKSTRIAADEKDAVDRKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSTFFESLETEKCNRG
G