CuGenDBv2

Gene ID	Sed0010031
Organism	Sechium edule (Chayote v1)
Description	cyclin-dependent protein kinase inhibitor SMR1-like
Genome location	LG01:24335589..24336708
RNA-Seq Expression	Sed0010031
Synteny	Sed0010031
Gene Ontology terms	GO:0032875 - regulation of DNA endoreduplication (biological process) GO:0045839 - negative regulation of mitotic nuclear division (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR040389 - Cyclin-dependent protein kinase inhibitor SMR

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008456553.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo]

1.7e-35

71.67

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Query:  MSTDLEF----PQIRLPLQLRS--ISDANNNNIPNSSSAADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNFF
        MS DLEF    P+IRLPLQ+RS      ++N IP+S   +D+    CRTPTSA+HKIPKI+ CPGAP+KPKRPPVPCKRKLTMELKFFEIV+QEEVDNFF
Subjt:  MSTDLEF----PQIRLPLQLRS--ISDANNNNIPNSSSAADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNFF

Query:  RSAYDLDSSS-APPKRTCCR
        RSAYDL+SSS APPKR CCR
Subjt:  RSAYDLDSSS-APPKRTCCR

XP_022923009.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]

1.0e-35

72.58

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Query:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN
        MS DLEFP+    IRLPLQ+RS    +N+ NIP+S S    AD+    CRTPTSA+HKIPKII CPGAPRKPKRPPVPCKRKLTMELKFFE V+QEEVDN
Subjt:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN

Query:  FFRSAYDLD-SSSAPPKRTCCRSA
        FFRSAYDL+ SS+AP KR+CCRSA
Subjt:  FFRSAYDLD-SSSAPPKRTCCRSA

XP_022990487.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]

1.2e-36

73.39

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Query:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN
        MS DLEFP+    IRLPLQ+RS    +N+ NIP+S S    AD+    CRTPTSA+HKIPKII CPGAPRKPKRPPVPCKRKLTMELKFFE V+QEEVDN
Subjt:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN

Query:  FFRSAYDLD-SSSAPPKRTCCRSA
        FFRSAYDL+ SS+APPKR+CCRSA
Subjt:  FFRSAYDLD-SSSAPPKRTCCRSA

XP_023521119.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]

1.2e-36

73.39

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Query:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN
        MS DLEFP+    IRLPLQ+RS    +N+ NIP+S S    AD+    CRTPTSA+HKIPKII CPGAPRKPKRPPVPCKRKLTMELKFFE V+QEEVDN
Subjt:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN

Query:  FFRSAYDLD-SSSAPPKRTCCRSA
        FFRSAYDL+ SS+APPKR+CCRSA
Subjt:  FFRSAYDLD-SSSAPPKRTCCRSA

XP_038884240.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]

1.6e-36

72.13

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Query:  MSTDLEF----PQIRLPLQLRSISDAN-NNNIPNSSSAAD------VCRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNF
        MS DLEF    P+IRLPLQ+RS    + ++NIP+S+S  D       CRTPTSA+HKIPKI+ CPGAP+KPKRPPVPCKRKLTMELKFFEIV+QEEVDNF
Subjt:  MSTDLEF----PQIRLPLQLRSISDAN-NNNIPNSSSAAD------VCRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNF

Query:  FRSAYDLD-SSSAPPKRTCCRS
        FRSAYDL+ SS+APPKRTCCRS
Subjt:  FRSAYDLD-SSSAPPKRTCCRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSQ6 Uncharacterized protein

1.4e-35

70.83

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Query:  MSTDLEF----PQIRLPLQLRS--ISDANNNNIPNSSSAADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNFF
        MS DLEF    P+IRLPLQ+RS      ++N IP+S   +D+    CRTPTSA+HKIPKI+ CPGAP+KPKRPPVPCKRKLTMELKFFEIV+QEEVDNFF
Subjt:  MSTDLEF----PQIRLPLQLRS--ISDANNNNIPNSSSAADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNFF

Query:  RSAYDLDSS-SAPPKRTCCR
        RSAYDL+SS +APPKR+CCR
Subjt:  RSAYDLDSS-SAPPKRTCCR

A0A1S3C3L4 cyclin-dependent protein kinase inhibitor SMR1-like

8.3e-36

71.67

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Query:  MSTDLEF----PQIRLPLQLRS--ISDANNNNIPNSSSAADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNFF
        MS DLEF    P+IRLPLQ+RS      ++N IP+S   +D+    CRTPTSA+HKIPKI+ CPGAP+KPKRPPVPCKRKLTMELKFFEIV+QEEVDNFF
Subjt:  MSTDLEF----PQIRLPLQLRS--ISDANNNNIPNSSSAADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNFF

Query:  RSAYDLDSSS-APPKRTCCR
        RSAYDL+SSS APPKR CCR
Subjt:  RSAYDLDSSS-APPKRTCCR

A0A5A7UMQ0 Cyclin-dependent protein kinase inhibitor SMR1-like

8.3e-36

71.67

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Query:  MSTDLEF----PQIRLPLQLRS--ISDANNNNIPNSSSAADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNFF
        MS DLEF    P+IRLPLQ+RS      ++N IP+S   +D+    CRTPTSA+HKIPKI+ CPGAP+KPKRPPVPCKRKLTMELKFFEIV+QEEVDNFF
Subjt:  MSTDLEF----PQIRLPLQLRS--ISDANNNNIPNSSSAADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNFF

Query:  RSAYDLDSSS-APPKRTCCR
        RSAYDL+SSS APPKR CCR
Subjt:  RSAYDLDSSS-APPKRTCCR

A0A6J1E540 cyclin-dependent protein kinase inhibitor SMR1-like

4.9e-36

72.58

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Query:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN
        MS DLEFP+    IRLPLQ+RS    +N+ NIP+S S    AD+    CRTPTSA+HKIPKII CPGAPRKPKRPPVPCKRKLTMELKFFE V+QEEVDN
Subjt:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN

Query:  FFRSAYDLD-SSSAPPKRTCCRSA
        FFRSAYDL+ SS+AP KR+CCRSA
Subjt:  FFRSAYDLD-SSSAPPKRTCCRSA

A0A6J1JIW3 cyclin-dependent protein kinase inhibitor SMR1-like

5.8e-37

73.39

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Query:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN
        MS DLEFP+    IRLPLQ+RS    +N+ NIP+S S    AD+    CRTPTSA+HKIPKII CPGAPRKPKRPPVPCKRKLTMELKFFE V+QEEVDN
Subjt:  MSTDLEFPQ----IRLPLQLRSISDANNN-NIPNSSS---AADV----CRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDN

Query:  FFRSAYDLD-SSSAPPKRTCCRSA
        FFRSAYDL+ SS+APPKR+CCRSA
Subjt:  FFRSAYDLD-SSSAPPKRTCCRSA

SwissProt top hits

e value

%identity

Alignment

Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR1

5.1e-06

33.94

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Query:  PLQLRSISDANNNNIPNSSSAADVCRTPTSADHKIPKIIRC-PGAPRKPKRPPV-----------PCKRKL---TMELKFFEIVHQEEVDNFFRSAYDLD
        P+++RS +     +  +       C TPTS +HKIP ++   P  PRKP+ PP             CKRKL   T E+    I+++EE+D FF S Y+  
Subjt:  PLQLRSISDANNNNIPNSSSAADVCRTPTSADHKIPKIIRC-PGAPRKPKRPPV-----------PCKRKL---TMELKFFEIVHQEEVDNFFRSAYDLD

Query:  SSSAPPKRT
        S++A  +R+
Subjt:  SSSAPPKRT

Q9LZ78 Cyclin-dependent protein kinase inhibitor SIM

5.1e-06

41.33

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Query:  CRTPTSADHKIPKIIRC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-IVHQEEVDNFFRSAYDLDSSSA
        C TPTS+DHKIP       P  P+KP+ P  P       CKRKL   L  +E IV+++E++ FF S Y+   +S+
Subjt:  CRTPTSADHKIPKIIRC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-IVHQEEVDNFFRSAYDLDSSSA

Arabidopsis top hits

e value

%identity

Alignment

AT1G08180.1 unknown protein

7.5e-05

35.06

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Query:  RSISDANNNNIPNSSSAADVCRTPTSADHKIPKIIRCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VHQEEVDNFF
        RS  + ++ +        +   TPTS+DHKIP++  CP  PRK P+   +  K +L+ +L+FFE   V  +EV+  F
Subjt:  RSISDANNNNIPNSSSAADVCRTPTSADHKIPKIIRCPGAPRK-PKRPPVPCKRKLTMELKFFEI--VHQEEVDNFF

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS

3.6e-07

33.94

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Query:  PLQLRSISDANNNNIPNSSSAADVCRTPTSADHKIPKIIRC-PGAPRKPKRPPV-----------PCKRKL---TMELKFFEIVHQEEVDNFFRSAYDLD
        P+++RS +     +  +       C TPTS +HKIP ++   P  PRKP+ PP             CKRKL   T E+    I+++EE+D FF S Y+  
Subjt:  PLQLRSISDANNNNIPNSSSAADVCRTPTSADHKIPKIIRC-PGAPRKPKRPPV-----------PCKRKL---TMELKFFEIVHQEEVDNFFRSAYDLD

Query:  SSSAPPKRT
        S++A  +R+
Subjt:  SSSAPPKRT

AT5G04470.1 cyclin-dependent protein kinase inhibitors

3.6e-07

41.33

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Query:  CRTPTSADHKIPKIIRC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-IVHQEEVDNFFRSAYDLDSSSA
        C TPTS+DHKIP       P  P+KP+ P  P       CKRKL   L  +E IV+++E++ FF S Y+   +S+
Subjt:  CRTPTSADHKIPKIIRC--PGAPRKPKRPPVP-------CKRKLTMELKFFE-IVHQEEVDNFFRSAYDLDSSSA

Sequences

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CDS sequence

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ATGTCTACGGACCTTGAATTCCCCCAAATCCGCCTCCCTTTGCAGCTCCGATCCATCTCCGACGCCAACAACAACAACATCCCTAATTCCTCCTCCGCCGCCGACGTCTG
CCGGACGCCCACCTCCGCCGACCACAAGATTCCGAAGATCATCCGCTGTCCCGGAGCGCCGCGGAAGCCGAAGCGTCCGCCGGTTCCTTGCAAGAGGAAGCTAACCATGG
AGCTCAAGTTCTTCGAGATCGTCCACCAGGAAGAAGTCGATAACTTCTTCCGATCCGCTTACGATCTCGATTCCTCCTCCGCGCCGCCCAAGCGAACCTGCTGCCGCTCC
GCCTGA

mRNA sequence

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TTCAAAGGCACGTCTTCCAAGTGATTTCCTAAATAAAAAAAAAAAAAAAAGTATTTCCATCCCACGAGACAAACGCCTTTATAGCCGTGTGTTCATCCATCGCTCACTTT
CCTTTCCTCTTCACAATAATCCTTTCCGCCATGTCTACGGACCTTGAATTCCCCCAAATCCGCCTCCCTTTGCAGCTCCGATCCATCTCCGACGCCAACAACAACAACAT
CCCTAATTCCTCCTCCGCCGCCGACGTCTGCCGGACGCCCACCTCCGCCGACCACAAGATTCCGAAGATCATCCGCTGTCCCGGAGCGCCGCGGAAGCCGAAGCGTCCGC
CGGTTCCTTGCAAGAGGAAGCTAACCATGGAGCTCAAGTTCTTCGAGATCGTCCACCAGGAAGAAGTCGATAACTTCTTCCGATCCGCTTACGATCTCGATTCCTCCTCC
GCGCCGCCCAAGCGAACCTGCTGCCGCTCCGCCTGATTCGTTCCCGGTTTGAGCCCTAATTTACCTCACCGATTATAGAAAATCAATTTTTCTTTCATTCTTTTCTCTTT
CCACTTCTCTGCTCTTCATGTTCTGTATTTTCATCACACGTACATACACATGGAACCGAATCAAATCGATTCCGCCTCTTCTTTCAATCCTTATCAGAGATACATCACCA
TGATCGTACTAAATCATTTCCGAAACAAAAAAATCAACAAATTAGATTTCTTAATCCTTGATCTGGAATCCACAAATCGAAACCCTAACTCTTTCGAATTACTGTTGTTT
TTCATGAATTCGATCTGCGCCTGCAATAATTGAGCTGTGGACATCATGAATTTTGATTCTGTTGACTGAAAATTTCACGATCGTGTTGATGATTTCTTCGATTCTGTTTT
CCGATTGCGATGGAAGTTTGATTTTGATCTGCAGATTTGTGCTATGATTTCTATTTTCTTGTTCAGTAAATTGGATACGGCTTTAGGAATTTTTCTAATTTTGATCAATT
TCCAGATAGAGCAAGAATGAGATGAATTGAAATTCTTCCATTTTTTTTTTTTTTTCATTTTTTCGATTGTAGTTTCAAATTATTGAGAGAGAGATGAATTTTTTTTAGGG
AAAAAATAAGAGGGAGAGGC

Protein sequence

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MSTDLEFPQIRLPLQLRSISDANNNNIPNSSSAADVCRTPTSADHKIPKIIRCPGAPRKPKRPPVPCKRKLTMELKFFEIVHQEEVDNFFRSAYDLDSSSAPPKRTCCRS
A

Sed0010031 (gene) of Chayote v1 genome