| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6593155.1 U1 small nuclear ribonucleoprotein C, partial [Cucurbita argyrosperma subsp. sororia] | 5.1e-88 | 89.23 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPGG PGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESN
RPP+ PRPVPGAPGYLP MPPMMAPPGA +PGQ+N+P+RPPPPAPIPGS PQPSS NG AP YQANPAAPGSGGYDSFTTMAQPSESN
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESN
|
|
| XP_004148886.1 U1 small nuclear ribonucleoprotein C [Cucumis sativus] | 1.1e-87 | 87.24 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP+MPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
RPP+LPRP+PGAPGYLP MPPMMAPPGAP+PGQ+NIP+RPPPPAP+PGS PQPSS NG AP YQANPAAPGSGGYDSFT+MAQPS +N
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
|
|
| XP_008451425.1 PREDICTED: U1 small nuclear ribonucleoprotein C [Cucumis melo] | 1.9e-87 | 87.24 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP++PG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
RPP+LPRP+PGAPGYLP MPPMMAPPGAP+PGQ+NIP+RPPPPAPIPGS PQPSS NG AP YQANPAAPGSGGYDSFT+MAQPS +N
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
|
|
| XP_023004664.1 U1 small nuclear ribonucleoprotein C [Cucurbita maxima] | 1.7e-88 | 89.74 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPGGAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESN
RPP+ PRPVPGAPGYLP MPPMMAPPGA +PGQ+N+P+RPPPPAPIPGS QPSS NG APP YQANPAAPGSGGYDSFTTMAQPSESN
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESN
|
|
| XP_038899936.1 U1 small nuclear ribonucleoprotein C isoform X1 [Benincasa hispida] | 1.2e-89 | 89.8 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSINGA----PPMYQANPAAPGSGGYDSFTTMAQPSESNN
RPP+LPRPVPGAPGYLP MPPMMAPPGAP+PGQ+NIPARPPPPAP+PGS PQPSS NGA P MYQANPAAPGSGGY+SFTTMAQPSE N+
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSINGA----PPMYQANPAAPGSGGYDSFTTMAQPSESNN
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K515 U1 small nuclear ribonucleoprotein C | 5.5e-88 | 87.24 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP+MPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
RPP+LPRP+PGAPGYLP MPPMMAPPGAP+PGQ+NIP+RPPPPAP+PGS PQPSS NG AP YQANPAAPGSGGYDSFT+MAQPS +N
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
|
|
| A0A1S3BS92 U1 small nuclear ribonucleoprotein C | 9.4e-88 | 87.24 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP++PG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
RPP+LPRP+PGAPGYLP MPPMMAPPGAP+PGQ+NIP+RPPPPAPIPGS PQPSS NG AP YQANPAAPGSGGYDSFT+MAQPS +N
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
|
|
| A0A5A7UNW2 U1 small nuclear ribonucleoprotein C | 9.4e-88 | 87.24 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTP++PG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
RPP+LPRP+PGAPGYLP MPPMMAPPGAP+PGQ+NIP+RPPPPAPIPGS PQPSS NG AP YQANPAAPGSGGYDSFT+MAQPS +N
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESNN
|
|
| A0A6J1H7P8 U1 small nuclear ribonucleoprotein C | 2.7e-87 | 88.72 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPGGAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESN
RPP+ PRP+PGAPGYLP MPPMMAPPGA +PGQ+N+P+RPPPPAPIPGS PQ SS NG AP YQANPAAPGSGGYDSFTTMAQPSESN
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESN
|
|
| A0A6J1KWY5 U1 small nuclear ribonucleoprotein C | 8.5e-89 | 89.74 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTP+MPGGAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESN
RPP+ PRPVPGAPGYLP MPPMMAPPGA +PGQ+N+P+RPPPPAPIPGS QPSS NG APP YQANPAAPGSGGYDSFTTMAQPSESN
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPVPGQMNIPARPPPPAPIPGSGPQPSSING----APPMYQANPAAPGSGGYDSFTTMAQPSESN
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XW44 U1 small nuclear ribonucleoprotein C | 7.3e-21 | 47.62 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E Q Q L+DQ +A A ++ A + +G P PV P+M GG PG+
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLPMPPMMAP-PGAPV-----PGQMNIPARPP
P M PRP PG P P P +AP PG P+ PG + RPP
Subjt: FRPPMLPRPVPGAPGYLPMPPMMAP-PGAPV-----PGQMNIPARPP
|
|
| C5XYW4 U1 small nuclear ribonucleoprotein C-2 | 3.7e-49 | 58.74 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPLMPGGAP
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP G P
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPLMPGGAP
Query: --GLMPGFRPPMLPRPVPGAPGYLPMPPMMAPPGAPVPGQMNIPARPPPPAPIPGS------------------GPQPSSINGA--------PPMYQANP
LMPG RPP+L P PG PGY PP M PGAP PG M P PP P PG+ P S + GA P +YQANP
Subjt: --GLMPGFRPPMLPRPVPGAPGYLPMPPMMAPPGAPVPGQMNIPARPPPPAPIPGS------------------GPQPSSINGA--------PPMYQANP
Query: AAPG---SGGYDSFTTMAQPSES
AP SG + T QP+ S
Subjt: AAPG---SGGYDSFTTMAQPSES
|
|
| C5XZK6 U1 small nuclear ribonucleoprotein C-1 | 4.1e-48 | 57.45 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPLMPGG--
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP G
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPLMPGG--
Query: -APG--LMPGFRPPMLPRPVPGAPGYLPMPPMMAPPGAPVPGQMNIPARPPPPAPIPGS------------------GPQPSSINGA--------PPMYQ
APG LMPG RPP+L P PG PGY PP M PGAP PG M P PP P PG+ P S + GA P +YQ
Subjt: -APG--LMPGFRPPMLPRPVPGAPGYLPMPPMMAPPGAPVPGQMNIPARPPPPAPIPGS------------------GPQPSSINGA--------PPMYQ
Query: ANPAAPG---SGGYDSFTT-------MAQPSESNN
NP AP SG + T AQPSE N+
Subjt: ANPAAPG---SGGYDSFTT-------MAQPSESNN
|
|
| F6HQ26 U1 small nuclear ribonucleoprotein C | 1.2e-63 | 70.37 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPLMP--GG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAAYNQHL+ RPRLPVLPTP MP G
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPLMP--GG
Query: AP-----GLMPGFRPPMLPRPVPGAPGYLP---MPPMMAPPGA---PVPGQMNIPARPP----PPAPIPGSGPQPSSINGAP-----PMYQANPAAPGSG
AP L+PG RPP+LPRPVPGAPGY+P MP MMAPPGA P+P ++P RPP PPA +PGS P+S GAP PMYQANPA P SG
Subjt: AP-----GLMPGFRPPMLPRPVPGAPGYLP---MPPMMAPPGA---PVPGQMNIPARPP----PPAPIPGSGPQPSSINGAP-----PMYQANPAAPGSG
Query: GYDSFTTMAQPSESNN
G+DSF AQ E+N+
Subjt: GYDSFTTMAQPSESNN
|
|
| Q56XE4 U1 small nuclear ribonucleoprotein C | 4.1e-48 | 61.42 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ +QQVGA +NQH+L RPR P++ L PG P G
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPLMPGGAPGLMPG
Query: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPV-----------PGQMNIPAR---PPPPAPIPG-SGPQPSSING--APPMYQANPAAPGSGGYDS
RPP+LPRP+ GY+P +P MMAPPGAP+ PG IP + PP APIPG G P + NG PP Y NPAAP SG +++
Subjt: FRPPMLPRPVPGAPGYLP---MPPMMAPPGAPV-----------PGQMNIPAR---PPPPAPIPG-SGPQPSSING--APPMYQANPAAPGSGGYDS
|
|
