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Sed0010044 (gene) of Chayote v1 genome

Gene IDSed0010044
OrganismSechium edule (Chayote v1)
DescriptionNHL domain protein
Genome locationLG11:33765614..33766456
RNA-Seq ExpressionSed0010044
SyntenySed0010044
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602448.1 hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sororia]2.6e-6878.95Show/hide
Query:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD
        M V+QSPD S D NGF      H  AFA RGCCFW+PCLRSNPS+SWW RIRAAD+DDEWW+RGW R RDWSEIVAGPKWKTF+R+F++NR+RQST+RYD
Subjt:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD

Query:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV
        PLSYALNFD+GP LDDPFSEDF RRDFSMRFASIPASAKSSMDLG+DGPSF+
Subjt:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV

XP_022961939.1 uncharacterized protein LOC111462557 [Cucurbita moschata]4.5e-6878.95Show/hide
Query:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD
        M V QSPD S D NGF      H  AFA RGCCFW+PCLRSNPS+SWW RIRAAD+DDEWW+RGW R RDWSEIVAGPKWKTF+R+F++NR+RQST+RYD
Subjt:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD

Query:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV
        PLSYALNFD+GP LDDPFSEDF RRDFSMRFASIPASAKSSMDLG+DGPSF+
Subjt:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV

XP_022990588.1 uncharacterized protein LOC111487422 [Cucurbita maxima]7.7e-6878.29Show/hide
Query:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD
        M V+QSPD S D NGF      H  AFA RGCCFW+PCLRSNPS++WW RIRAAD+DDEWW+RGW R RDWSEIVAGPKWKTF+R+F++NR+RQST+RYD
Subjt:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD

Query:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV
        PLSYALNFDDGP LDDPF EDF RRDFSMRFASIPASAKSSMDLG+DGPSF+
Subjt:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV

XP_023533538.1 uncharacterized protein LOC111795380 [Cucurbita pepo subsp. pepo]1.0e-6778.29Show/hide
Query:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD
        M V+QSPD S D NGF      H  AFA RGCCFW+PCLRS+PS+SWW RIRAAD+DDEWW+RGW R RDWSEIVAGPKWKTF+R+F++NR+RQST+RYD
Subjt:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD

Query:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV
        PLSYALNFD+GP LDDPFSEDF RRDFSMRFASIPASAKSSMDLG+DGPSF+
Subjt:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV

XP_038889212.1 uncharacterized protein LOC120079097 [Benincasa hispida]5.5e-6675.5Show/hide
Query:  MPVAQSPDRSPDENGFHG-----GAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYDP
        M +AQSPD S DEN FHG      AF  RGCC W+PCLRSNPSQSWW RIRAAD+DDEWW+RGW R R+WSEI+AGPKWKTF+R+FN+NRNRQSTFRYDP
Subjt:  MPVAQSPDRSPDENGFHG-----GAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYDP

Query:  LSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV
        LSY+LNFD+GP  DDPFS+D  RRDFS RFA+IPASAKSSMDLG+DGP F+
Subjt:  LSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV

TrEMBL top hitse value%identityAlignment
A0A0A0KRY7 Uncharacterized protein3.3e-6473.68Show/hide
Query:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD
        M +A SPD S DENGF      H   FA RGCC WIPCLRSN SQSWW RIRAAD+DDEWW++GW R R+WSEIVAGPKWKTF+R+F++NRNRQSTFRYD
Subjt:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD

Query:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV
        PLSY+LNFD+GP  DDPF++DF RRDFS RFA+IPASAKSSMDLG+D PSF+
Subjt:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV

A0A1S4E267 uncharacterized protein LOC1079916283.1e-6272.85Show/hide
Query:  MPVAQSPDRSPDENGFHG-----GAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYDP
        M +AQSPD S DENGFH        FA  GCCFWIPCLRSN SQSWW RIRAAD+DDEWW+RGW R R+WSEIVAGPKWKTF+R+F++NRNRQSTFRYDP
Subjt:  MPVAQSPDRSPDENGFHG-----GAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYDP

Query:  LSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV
        LSY+LNFD+GP  +D F++DF RRDFS RFA+IPASAKSSMDL +D PS +
Subjt:  LSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV

A0A5A7T228 Putative NHL domain-containing protein1.3e-6073.97Show/hide
Query:  MPVAQSPDRSPDENGFHG-----GAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYDP
        M +AQSPD S DENGFH        FA  GCCFWIPCLRSN SQSWW RIRAAD+DDEWW+RGW R R+WSEIVAGPKWKTF+R+F++NRNRQSTFRYDP
Subjt:  MPVAQSPDRSPDENGFHG-----GAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYDP

Query:  LSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRD
        LSY+LNFD+GP  +D F++DF RRDFS RFA+IPASAKSSMDL +D
Subjt:  LSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRD

A0A6J1HFG4 uncharacterized protein LOC1114625572.2e-6878.95Show/hide
Query:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD
        M V QSPD S D NGF      H  AFA RGCCFW+PCLRSNPS+SWW RIRAAD+DDEWW+RGW R RDWSEIVAGPKWKTF+R+F++NR+RQST+RYD
Subjt:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD

Query:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV
        PLSYALNFD+GP LDDPFSEDF RRDFSMRFASIPASAKSSMDLG+DGPSF+
Subjt:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV

A0A6J1JTQ3 uncharacterized protein LOC1114874223.7e-6878.29Show/hide
Query:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD
        M V+QSPD S D NGF      H  AFA RGCCFW+PCLRSNPS++WW RIRAAD+DDEWW+RGW R RDWSEIVAGPKWKTF+R+F++NR+RQST+RYD
Subjt:  MPVAQSPDRSPDENGF------HGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYD

Query:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV
        PLSYALNFDDGP LDDPF EDF RRDFSMRFASIPASAKSSMDLG+DGPSF+
Subjt:  PLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)3.3e-3245Show/hide
Query:  HGGAFARRGCCFWIPCLRSNPSQS-----WWHRIRAADS---DDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNR----------------------N
        H   FA+RGCCF +PCL S+   +     WW RI   D    D+ WWIRGW R+R+WSE+VAGP+WKT++RRF R+                       N
Subjt:  HGGAFARRGCCFWIPCLRSNPSQS-----WWHRIRAADS---DDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNR----------------------N

Query:  R---QSTFRYDPLSYALNFDDGPPLDDPFSEDFARRDFSMRFA--SIPASAKSSMDLGRD
        R   Q  FRYD LSY+LNFDDG      F ++F  RD+SMRFA  S+P S K S+D   D
Subjt:  R---QSTFRYDPLSYALNFDDGPPLDDPFSEDFARRDFSMRFA--SIPASAKSSMDLGRD

AT3G48020.1 unknown protein2.8e-2348.65Show/hide
Query:  CLRSNPSQSWWHRI-RAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNR------QSTFRYDPLSYALNFDDGPPLDDPFSEDFARRDFSMR
        C  +    SWW RI R    +  WW+R + +IR+WSEIVAGP+WKTF+RRFNR+  R         FRYDP+SY L+F+D    DD  +     R FSMR
Subjt:  CLRSNPSQSWWHRI-RAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNR------QSTFRYDPLSYALNFDDGPPLDDPFSEDFARRDFSMR

Query:  FASIP-ASAKS
        +AS+P AS KS
Subjt:  FASIP-ASAKS

AT5G14890.1 NHL domain-containing protein1.0e-3349.66Show/hide
Query:  HGGAFARRGCCFWIPCLRSN----PSQS-WWHRIRAADS---DDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNR------------NRNRQSTFRYDPL
        H   FA+RGCCF +PCL S+    P+ S WW RIR  D    D+ WW+ GW ++R+WSEIVAGPKWKTF+RRF R            NR    +FRYD  
Subjt:  HGGAFARRGCCFWIPCLRSN----PSQS-WWHRIRAADS---DDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNR------------NRNRQSTFRYDPL

Query:  SYALNFDDGPPLDDPFSEDFARRDFSMRFA--SIPASAKSSMDLGRD
        SY+LNFDDG      F ++F  RD+SMRFA  S+P S K S+D   D
Subjt:  SYALNFDDGPPLDDPFSEDFARRDFSMRFA--SIPASAKSSMDLGRD

AT5G25240.1 unknown protein4.7e-0735.37Show/hide
Query:  SQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNR---NRQSTFRYDPLSYALNFDDGPPLDDPFSEDF
        S+  W      +    W       +++ SE +AGPKWK F+R F+  R    R   F YD  +Y+LNFDDG    D   E F
Subjt:  SQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNR---NRQSTFRYDPLSYALNFDDGPPLDDPFSEDF

AT5G62865.1 unknown protein1.0e-2243.33Show/hide
Query:  MPVAQS-PDRSPDENGFHGGAFARRGCCFWIPCLRSNPSQ-----SWWHRIRAAD---------SDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNR
        M ++QS P R PD        + +R CCF  P  R + S      S W RIR  D          +  WWIR   +IR+WSEIVAGP+WKTF+RRFNR+ 
Subjt:  MPVAQS-PDRSPDENGFHGGAFARRGCCFWIPCLRSNPSQ-----SWWHRIRAAD---------SDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNR

Query:  NR------QSTFRYDPLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIP
         R         F+YDPLSY+LNFDD    +D +      R FS RFAS+P
Subjt:  NR------QSTFRYDPLSYALNFDDGPPLDDPFSEDFARRDFSMRFASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGTTGCTCAATCTCCGGATCGCTCTCCCGACGAAAATGGCTTCCACGGCGGCGCCTTCGCCAGGCGCGGCTGCTGTTTCTGGATCCCCTGCCTGAGATCCAATCC
CTCCCAGTCTTGGTGGCACCGAATTAGGGCAGCCGATTCCGACGACGAGTGGTGGATCCGAGGCTGGAACCGCATCCGCGACTGGTCGGAAATCGTCGCCGGTCCTAAAT
GGAAGACGTTCCTTCGTCGATTCAACAGGAATCGCAACCGCCAATCCACATTCCGCTACGATCCGCTCAGCTACGCTCTCAATTTCGACGACGGTCCGCCGCTCGACGAT
CCATTCAGCGAGGATTTCGCTCGCCGCGACTTCTCCATGCGATTCGCCTCGATTCCGGCTTCCGCGAAGTCCTCCATGGATCTCGGCAGGGATGGGCCGTCCTTTGTTTG
A
mRNA sequenceShow/hide mRNA sequence
CCCTAATTTCGTTTCATATATTAATAATTAACGATGAACATCTTCTTCTTCCCAAAAAAAAAAACTCATCGATTCAGTTTGAAACAGAGAAGAATCCCTGTATCAATTGA
TTTGCAGAAATTGTTTTCCCCCAAAACATTTCTGCAAATTAATCCCAACAGATCCATATATACCTCTCTCTCTGTAAATGCCTGTTGCTCAATCTCCGGATCGCTCTCCC
GACGAAAATGGCTTCCACGGCGGCGCCTTCGCCAGGCGCGGCTGCTGTTTCTGGATCCCCTGCCTGAGATCCAATCCCTCCCAGTCTTGGTGGCACCGAATTAGGGCAGC
CGATTCCGACGACGAGTGGTGGATCCGAGGCTGGAACCGCATCCGCGACTGGTCGGAAATCGTCGCCGGTCCTAAATGGAAGACGTTCCTTCGTCGATTCAACAGGAATC
GCAACCGCCAATCCACATTCCGCTACGATCCGCTCAGCTACGCTCTCAATTTCGACGACGGTCCGCCGCTCGACGATCCATTCAGCGAGGATTTCGCTCGCCGCGACTTC
TCCATGCGATTCGCCTCGATTCCGGCTTCCGCGAAGTCCTCCATGGATCTCGGCAGGGATGGGCCGTCCTTTGTTTGACCTCGGCGCGGCGGCGGAATACACGGATGATG
GATTATTCGCTCGGTTTTCTCTCGCCGGAGCCGCCGTGCGCGGAGGCGGGATTGGCGTTTTGGGGACGACGGGGATTGTGAATGGTTCGGTTAATTTGTGGCCGGCGTTA
AAAACTATGAACTCGGTGATTCTTTTTATTATATTTTTATTTTTTGAAATGAAGGTTATAATGTTTTATGATT
Protein sequenceShow/hide protein sequence
MPVAQSPDRSPDENGFHGGAFARRGCCFWIPCLRSNPSQSWWHRIRAADSDDEWWIRGWNRIRDWSEIVAGPKWKTFLRRFNRNRNRQSTFRYDPLSYALNFDDGPPLDD
PFSEDFARRDFSMRFASIPASAKSSMDLGRDGPSFV