; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010056 (gene) of Chayote v1 genome

Gene IDSed0010056
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25-like
Genome locationLG04:5271860..5273964
RNA-Seq ExpressionSed0010056
SyntenySed0010056
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030819.1 hypothetical protein SDJN02_04856, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-2464.71Show/hide
Query:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKGG
        MR EG CC FSY KVLLGAV VG+ +WLLIVG  +SGER +AKT     A S   GSH+KQAK L          NFMSKVKVPKGPDPIHNRR GVKG 
Subjt:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKGG

Query:  PP
        PP
Subjt:  PP

XP_011655655.1 uncharacterized protein LOC105435565 [Cucumis sativus]2.7e-2261.9Show/hide
Query:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSH-VKQAK-VLPNNNHPE-LDPNFMSKVKVPKGPDPIHNRRIGV
        M+S   CC+FSYLKVLLGAV VG+ +WLL+VGS      R       AE+   V G H +K+A+  L  NNHP+ LDPNFMSKV+VPKGPDPIHNRRIGV
Subjt:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSH-VKQAK-VLPNNNHPE-LDPNFMSKVKVPKGPDPIHNRRIGV

Query:  KGGPP
        KGGPP
Subjt:  KGGPP

XP_022151235.1 uncharacterized protein LOC111019209 [Momordica charantia]1.4e-2664.76Show/hide
Query:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKGG
        MRSEG  C FSYLK LL A+ VG+ LW+L+VG  ES ER   +T     A     GSHVKQ KVLPNNNH +LD NFMSKV+VPKGPDPIHNRR+G+ GG
Subjt:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKGG

Query:  PPGRA
        PP RA
Subjt:  PPGRA

XP_038891924.1 uncharacterized protein LOC120081268 [Benincasa hispida]3.3e-2871.84Show/hide
Query:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHV-KQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKG
        MRS   C +FSYLKVLLGAV VG+ +WLLIVGS+  G      T  R  AES V GSHV KQA+ L NNNHP+LDPNFMSKVKVPKGPDPIHNRRIGVKG
Subjt:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHV-KQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKG

Query:  GPP
        GPP
Subjt:  GPP

XP_042978760.1 uncharacterized protein LOC122309350 [Carya illinoinensis]4.5e-0947.47Show/hide
Query:  SYLKVLLGAVGVGVVLWLLIVGSVESGER-RVAKTFGRAEAESVVGGSHVKQAKVLPNNN---HPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA
        S+LKVL GA+ + VV++L  V S + G R  +A T       S  G +    A V+   N   HPEL+ N+MSK +VP GPDPIHNRR G  G PPGRA
Subjt:  SYLKVLLGAVGVGVVLWLLIVGSVESGER-RVAKTFGRAEAESVVGGSHVKQAKVLPNNN---HPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA

TrEMBL top hitse value%identityAlignment
A0A067H4U1 Uncharacterized protein4.8e-0942.11Show/hide
Query:  KVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNN---NHPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA
        K L GA+ VG ++ LL++G++ESG          +   +    +++K+A+ L      +HPELD N+MSK +VP GPDPIHNRR G  G PPG++
Subjt:  KVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNN---NHPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA

A0A0A0KQF7 Uncharacterized protein1.3e-2261.9Show/hide
Query:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSH-VKQAK-VLPNNNHPE-LDPNFMSKVKVPKGPDPIHNRRIGV
        M+S   CC+FSYLKVLLGAV VG+ +WLL+VGS      R       AE+   V G H +K+A+  L  NNHP+ LDPNFMSKV+VPKGPDPIHNRRIGV
Subjt:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSH-VKQAK-VLPNNNHPE-LDPNFMSKVKVPKGPDPIHNRRIGV

Query:  KGGPP
        KGGPP
Subjt:  KGGPP

A0A2H5N8H6 Uncharacterized protein1.4e-0841.05Show/hide
Query:  KVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNN---NHPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA
        K L G + VG ++ LL++G++ESG          +   +    +++K+A+ L      +HPELD N+MSK +VP GPDPIHNRR G  G PPG++
Subjt:  KVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNN---NHPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA

A0A6J1DAM7 uncharacterized protein LOC1110192096.7e-2764.76Show/hide
Query:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKGG
        MRSEG  C FSYLK LL A+ VG+ LW+L+VG  ES ER   +T     A     GSHVKQ KVLPNNNH +LD NFMSKV+VPKGPDPIHNRR+G+ GG
Subjt:  MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKGG

Query:  PPGRA
        PP RA
Subjt:  PPGRA

V4VGV5 Uncharacterized protein4.8e-0942.11Show/hide
Query:  KVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNN---NHPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA
        K L GA+ VG ++ LL++G++ESG          +   +    +++K+A+ L      +HPELD N+MSK +VP GPDPIHNRR G  G PPG++
Subjt:  KVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNN---NHPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G69970.2 CLAVATA3/ESR-RELATED 262.7e-0436.9Show/hide
Query:  VGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA
        VGVV  L+I   V    +   KT     A ++      +  + L + +  +      SK KVP+GPDPIHNRR G    PPGRA
Subjt:  VGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGTGAAGGTGGCTGTTGCTGGTTTTCTTACTTGAAGGTCTTGCTTGGAGCTGTGGGTGTAGGGGTGGTTCTATGGCTTTTAATCGTCGGCTCGGTGGAGAGTGG
AGAACGGCGTGTGGCCAAAACATTCGGTCGAGCGGAAGCTGAGTCCGTGGTTGGAGGAAGCCATGTGAAGCAAGCCAAGGTACTGCCTAACAACAACCATCCAGAGTTGG
ATCCTAACTTTATGAGCAAAGTTAAAGTTCCCAAGGGACCAGACCCCATTCATAACAGGAGAATTGGGGTTAAAGGAGGGCCTCCCGGTCGAGCTTAG
mRNA sequenceShow/hide mRNA sequence
AGAAAAGTGCAACAGAATCCACCAACTCTATAAAGAGAAAAAGGATAACTCTCTAATCAAACATGCAGCCCCTACCAAAACCAAAAAAAAAAAAACTCTTCTTCCTCTCC
TTCACTAATCTCATACTTCTTCTCTTCATTACTTGATGTTAACTAAGACAACACGACACACCGATAGCCGTTATATATCCTTCCCTTTCGAGTCGTAAAAACGACTAAAT
CTCCCTCGACATACACAGACGGAAGTGTGTGTGTATATATATAGAGTAGATAACTGCATATATATTTATGAGAAGTGAAGGTGGCTGTTGCTGGTTTTCTTACTTGAAGG
TCTTGCTTGGAGCTGTGGGTGTAGGGGTGGTTCTATGGCTTTTAATCGTCGGCTCGGTGGAGAGTGGAGAACGGCGTGTGGCCAAAACATTCGGTCGAGCGGAAGCTGAG
TCCGTGGTTGGAGGAAGCCATGTGAAGCAAGCCAAGGTACTGCCTAACAACAACCATCCAGAGTTGGATCCTAACTTTATGAGCAAAGTTAAAGTTCCCAAGGGACCAGA
CCCCATTCATAACAGGAGAATTGGGGTTAAAGGAGGGCCTCCCGGTCGAGCTTAGGCTTAAGGTTGTAGAGTTTCAGTTCAGATCAGGAATCATGCCACGTGTTCTTCTC
AACCTTATCTCTCTTTTAATCTTTTCTTTACTTAAAATAAACAATCCCTTTTGTTTGTATTCTAATTTCAATAATCCAAAATGCTTCTTAAAAAAATATCTTACAATTCT
TCATAATATGCTTCTAAACAAACTCGGCCCAATTATAATTCCTATCGGACTA
Protein sequenceShow/hide protein sequence
MRSEGGCCWFSYLKVLLGAVGVGVVLWLLIVGSVESGERRVAKTFGRAEAESVVGGSHVKQAKVLPNNNHPELDPNFMSKVKVPKGPDPIHNRRIGVKGGPPGRA