CuGenDBv2

Gene ID	Sed0010078
Organism	Sechium edule (Chayote v1)
Description	Antigenic heat-stable 120 kDa protein
Genome location	LG03:13605248..13612406
RNA-Seq Expression	Sed0010078
Synteny	Sed0010078
Gene Ontology terms	GO:0006415 - translational termination (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016149 - translation release factor activity, codon specific (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008453632.1 PREDICTED: uncharacterized protein LOC103494285 [Cucumis melo]

9.7e-84

90.96

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN+GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   F PQNGD+P VKETE  KGKGKEPED+YHKEKS P+RKRS+NDMNGKEEN VADGAGE+L VPEE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

XP_022938214.1 uncharacterized protein LOC111444361 [Cucurbita moschata]

3.9e-85

91.49

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   FPP+NGDIPSVKETEN KGKGKEPEDDYHKEKS P+RKRS+ DMNGK+ENNV DGAGENL   EE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

XP_022965964.1 uncharacterized protein LOC111465686 [Cucurbita maxima]

3.3e-84

90.96

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   FPP+NGDIPSVKETEN KGK KEPEDDYHKEKS P+RKRS+ DMNGK+ENNV DGAGENL   EE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

XP_023536782.1 uncharacterized protein LOC111798060 [Cucurbita pepo subsp. pepo]

5.1e-85

91.49

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   FPP+NGDIPSVKETEN KGKGKEPEDDYHKEKS P+RKRS+ DMNGK+ENNV DGAGENL   EE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

XP_038890481.1 uncharacterized protein LOC120080024 isoform X1 [Benincasa hispida]

2.1e-86

92.55

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        M SSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN+GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   FPPQNGD+PSVKETEN KGKGKEPED+YHKEKS+PIRKRS+NDMNGKEEN VADGAGE+L VPEE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGM0 Uncharacterized protein

6.1e-84

89.89

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN+GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   F PQNGD+P VKETE+ KGKGKEPED+YHKEKS P+RKRS+NDMNGKEE+ +ADGAGE+L VPEE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

A0A1S3BWQ6 uncharacterized protein LOC103494285

4.7e-84

90.96

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN+GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   F PQNGD+P VKETE  KGKGKEPED+YHKEKS P+RKRS+NDMNGKEEN VADGAGE+L VPEE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

A0A5D3BAZ9 Uncharacterized protein

4.7e-84

90.96

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN+GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   F PQNGD+P VKETE  KGKGKEPED+YHKEKS P+RKRS+NDMNGKEEN VADGAGE+L VPEE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

A0A6J1FDE9 uncharacterized protein LOC111444361

1.9e-85

91.49

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   FPP+NGDIPSVKETEN KGKGKEPEDDYHKEKS P+RKRS+ DMNGK+ENNV DGAGENL   EE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

A0A6J1HSD3 uncharacterized protein LOC111465686

1.6e-84

90.96

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP
        NDTVEKVFCRLSGKE   FPP+NGDIPSVKETEN KGK KEPEDDYHKEKS P+RKRS+ DMNGK+ENNV DGAGENL   EE SRSP
Subjt:  NDTVEKVFCRLSGKE---FPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12530.1 unknown protein

7.1e-16

32.39

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        M  +  I+ E+V+E L +DG  D LRLKII +LK NE+L+N  I +V++S  L   GA+    R+L DA+ +E+ + +L + S  +W +I   DG+  EI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKEFPPQNGDIPSVKETENS-KGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENL
         +TV+ V+  LS    P       S +E E+      KE   D++   + P  K+    + G  E+N  +   +++
Subjt:  NDTVEKVFCRLSGKEFPPQNGDIPSVKETENS-KGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENL

AT1G56420.1 unknown protein

7.5e-50

68.71

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI
        MSSSSVI PEDVLE LMNDGTID+LRL+IINQLKANEELK+TTIKM E+SKVLNTPGAEKQTKRELFDALRQELE PVLEKASKSVW+LI++ DGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEI

Query:  NDTVEKVFCRLSGKEFPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKE
        N+TVE+VFC LSG+E P  +    +V++T     K  E +D     K+ P +KRS +++N  E
Subjt:  NDTVEKVFCRLSGKEFPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGTTCGTCTTCGGTAATAACTCCTGAAGATGTGTTGGAGTCGCTGATGAATGATGGTACTATTGATTCTCTTAGGTTGAAGATCATTAACCAGCTCAAAGCCAATGA
GGAGCTTAAGAATACCACCATTAAAATGGTAGAGCAGAGCAAAGTCCTCAATACCCCTGGGGCAGAGAAACAGACTAAAAGAGAGTTGTTTGATGCTCTCCGACAGGAAC
TCGAAGCACCGGTGCTTGAGAAAGCCTCTAAATCTGTTTGGGAATTGATTTTGGACAACGATGGATTGGGCAAAGAAATAAACGACACAGTCGAAAAAGTGTTTTGTCGA
TTGAGTGGCAAGGAGTTTCCTCCTCAAAATGGAGACATCCCATCAGTCAAAGAAACCGAGAACAGTAAAGGGAAGGGAAAAGAACCCGAAGACGATTATCACAAGGAGAA
ATCATACCCGATTAGGAAAAGGAGTTACAATGACATGAATGGCAAAGAGGAAAACAATGTTGCAGATGGAGCTGGAGAAAATCTACCTGTACCTGAAGAACGCAGTAGGT
CACCTTAG

mRNA sequence

Show/hide mRNA sequence

GTAATTTTTCCTAAATAGAATTTCCCACTCCCCCACCCCAGGCGAGGAGCATATGCACATTATACAAACTTCGAAAACAGAAACAGGTTTTAGATTGAAAACGCCGCTGT
TGCGATTTTGAAGTAGGGGGAAAATTGCAAGGAGATTCATGAGTTCGTCTTCGGTAATAACTCCTGAAGATGTGTTGGAGTCGCTGATGAATGATGGTACTATTGATTCT
CTTAGGTTGAAGATCATTAACCAGCTCAAAGCCAATGAGGAGCTTAAGAATACCACCATTAAAATGGTAGAGCAGAGCAAAGTCCTCAATACCCCTGGGGCAGAGAAACA
GACTAAAAGAGAGTTGTTTGATGCTCTCCGACAGGAACTCGAAGCACCGGTGCTTGAGAAAGCCTCTAAATCTGTTTGGGAATTGATTTTGGACAACGATGGATTGGGCA
AAGAAATAAACGACACAGTCGAAAAAGTGTTTTGTCGATTGAGTGGCAAGGAGTTTCCTCCTCAAAATGGAGACATCCCATCAGTCAAAGAAACCGAGAACAGTAAAGGG
AAGGGAAAAGAACCCGAAGACGATTATCACAAGGAGAAATCATACCCGATTAGGAAAAGGAGTTACAATGACATGAATGGCAAAGAGGAAAACAATGTTGCAGATGGAGC
TGGAGAAAATCTACCTGTACCTGAAGAACGCAGTAGGTCACCTTAGTTGAGTTTGAAGACAGGTACACGAACCATGCTTTGACAACAGATCTTGCAGGTGTGGTCTTGCG
ATCATTGGTTCGAGTTTTTCCATCTTAATCTGGTGCGCATGGCCTGTGTCAAATATGAATAAAATCCGATGCTATGCACGCCGCATACGCAATTGATGGGACTGGGAGTC
TAAAATTGAACACTTTCTGGTTAGAAAATAAGATGTTTAGTGTAAAAACTAGCTTTTGTAATCTAATCTACCCATGACAAAGCTGTGAAAAACAATATAATTATCAATTG
GTAACTTTGTGCATC

Protein sequence

Show/hide protein sequence

MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNDGLGKEINDTVEKVFCR
LSGKEFPPQNGDIPSVKETENSKGKGKEPEDDYHKEKSYPIRKRSYNDMNGKEENNVADGAGENLPVPEERSRSP

Sed0010078 (gene) of Chayote v1 genome