; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010104 (gene) of Chayote v1 genome

Gene IDSed0010104
OrganismSechium edule (Chayote v1)
Descriptiontranslocator protein homolog
Genome locationLG12:5156978..5157881
RNA-Seq ExpressionSed0010104
SyntenySed0010104
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR004307 - TspO/MBR-related protein
IPR038330 - TspO/MBR-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597521.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.0e-6275.44Show/hide
Query:  INSTMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYV
        ++S+   KSRPESKYTKAKRALRSLAVSVAIPLTL IA IFLFG   RHFP R RP WVAPLWLLHLSS+ S+FL G+AAWLVWADGGFH  S+ALP+Y+
Subjt:  INSTMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYV

Query:  AHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        AHLSLS++WNPLV   RA LLAF  CVLD V L+A YR+FKR+NPFAKDLIKP LAWT YL AVTY+FIDL
Subjt:  AHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

XP_022945022.1 translocator protein homolog [Cucurbita moschata]1.4e-6473.66Show/hide
Query:  FHLHFALISQI-NSTMSS----KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWA
        F  +F ++S+I +STMSS    KSRPESKYTKAKRALRSLAVSVAIPLTL IA IFLFG   RHFP R RP WVAPLWLLHLSS+ S+FL G+AAWLVWA
Subjt:  FHLHFALISQI-NSTMSS----KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWA

Query:  DGGFHGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        DGGFH  S+ALP+Y+AHLSLS++WNPLV   RA LLAF  CVLD V L+A YR+FKR+NPFAKDLIKP LAWT YL AVTY+FIDL
Subjt:  DGGFHGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]4.1e-6476.61Show/hide
Query:  INSTMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYV
        ++S+   KSRPESKYTKAKRALRSLAVSVAIPLTL IA IFLFG   RHFP R RP WVAPLWLLHLSS+ S+FL G+AAWLVWADGGFH  S+ALP+Y+
Subjt:  INSTMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYV

Query:  AHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        AHLSLS++WNPLV   RALLLAF  CVLDFV L+A YR+FKR+NPFAKDLIKP LAWT YL AVTY+FIDL
Subjt:  AHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]1.1e-6473.12Show/hide
Query:  FHLHFALISQ-INSTMSS----KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWA
        F  +F ++++ ++STMSS    KSRPESKYTKAKRALRSLAVSVAIPLTL IA IFLFG   RHFP R RP WVAPLWLLHLSS+ S+FL G+AAWLVWA
Subjt:  FHLHFALISQ-INSTMSS----KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWA

Query:  DGGFHGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        DGGFH  S+ALP+Y+AHLSLS++WNPLV   RALLLAF  CVLD V L+A YR+FKR+NPFAKDLIKP LAWT YL AVTY+FIDL
Subjt:  DGGFHGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

XP_038878873.1 translocator protein homolog [Benincasa hispida]1.9e-6478.05Show/hide
Query:  KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAHLSLSI
        KSRPESKYTKAKRALRSLAVSVAIPL+L IA IFLFG   RHFP R RP W+ PLWLLHLSS+GS+FL G+AAWLVWADGGFHG S+ALP+Y+AHLSLS+
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAHLSLSI

Query:  LWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        +WNPLV   R+++LAF  CVLDFV LFA YR+FKR+NPFAKDLIKP LAWT YLSAVTY+FIDL
Subjt:  LWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

TrEMBL top hitse value%identityAlignment
A0A0A0L583 Uncharacterized protein3.5e-6173.78Show/hide
Query:  KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAHLSLSI
        KSRPESKYTKAKRALRSLAVSVAIP++L IAAIFLFG   RH+P R RP W+ PLWL+ LSS+GS+FL G+AAWLVWADGGFHG S+ALP+Y+AHLSLS+
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAHLSLSI

Query:  LWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        +WNPLV   R++++AF  CVLD V LFA Y +FKR+NPFAKDL+KP LAWT YLSAVTY+FIDL
Subjt:  LWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

A0A5D3CWC4 Translocator protein-like protein3.5e-6173.78Show/hide
Query:  KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAHLSLSI
        KSRPESKYTKAKRALRSLAVSVAIP++L IA IFLFG   RHFP R RP W+ PLWLL LSS+GS+FL G+AAWLVWADGGFHG S+ALP+Y+AHLSLS+
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAHLSLSI

Query:  LWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        +W+PLV   R++++AF  CVLDFV LFA YR+F+R+NPFAKDL+KP LAWT YLSAVTY+FI L
Subjt:  LWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

A0A6J1CCG7 translocator protein homolog2.7e-6173.53Show/hide
Query:  INSTMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLF--GRHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVA
        ++S+   KSRPESKYTKAKRALRSLAVSVAIPL+L I  IFLF  GRHFP R RP W+APLW LHLSS+GS+FL G++AWLVWADGGFHG S+ALP+Y+A
Subjt:  INSTMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLF--GRHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVA

Query:  HLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        HL+LS++WNPLV   RA+LLAF  CVLDF+ LFA YRSFKR+NPFAKDLIKP LA T YLSAVTY+ I L
Subjt:  HLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

A0A6J1FZS9 translocator protein homolog6.9e-6573.66Show/hide
Query:  FHLHFALISQI-NSTMSS----KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWA
        F  +F ++S+I +STMSS    KSRPESKYTKAKRALRSLAVSVAIPLTL IA IFLFG   RHFP R RP WVAPLWLLHLSS+ S+FL G+AAWLVWA
Subjt:  FHLHFALISQI-NSTMSS----KSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWA

Query:  DGGFHGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        DGGFH  S+ALP+Y+AHLSLS++WNPLV   RA LLAF  CVLD V L+A YR+FKR+NPFAKDLIKP LAWT YL AVTY+FIDL
Subjt:  DGGFHGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

A0A6J1ICB9 translocator protein homolog2.0e-6476.61Show/hide
Query:  INSTMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYV
        ++S+   KSRPESKYTKAKRALRSLAVSVAIPLTL IA IFLFG   RHFP R RP WVAPLWLLHLSS+ S+FL G+AAWLVWADGGFH  S+ALP+Y+
Subjt:  INSTMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFG---RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYV

Query:  AHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL
        AHLSLS++WNPLV   RALLLAF  CVLDFV L+A YR+FKR+NPFAKDLIKP LAWT YL AVTY+FIDL
Subjt:  AHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL

SwissProt top hitse value%identityAlignment
E2RDM9 Translocator protein 21.5e-0530.41Show/hide
Query:  AVSVAIPLTLRIAAIFLFGRH-----FPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWAD-GGFHGASSALPIYVAHLSLSILWNPLVFANRALLLA
        A+ VA+P  L    + L  RH     +   ++P W  P  +L    +   F+ G A++LVW D GG  G   ALP+ +  + L++ W  L+F   A   A
Subjt:  AVSVAIPLTLRIAAIFLFGRH-----FPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWAD-GGFHGASSALPIYVAHLSLSILWNPLVFANRALLLA

Query:  FPLCVLDFVILFALYRS----FKRLNPFAKDLIKPYLAWTLYLSAVTY
          L +L  ++L+ L  S    +  +N  A  L+ PYLAW    +++ Y
Subjt:  FPLCVLDFVILFALYRS----FKRLNPFAKDLIKPYLAWTLYLSAVTY

O82245 Translocator protein homolog2.8e-2335.8Show/hide
Query:  STMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFGR---HFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAH
        S   +K + + K   AKR L+SL V+VA P+ + + A +  G    +    +  +W+ PLWLLH + + S+ L G+AAWLVW DGGFH   +AL +Y+A 
Subjt:  STMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFGR---HFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAH

Query:  LSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAV
          L ++W+P+ F   + +    + +     LF  Y++F  ++P A +L+KP LAW  +++AV
Subjt:  LSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAV

P50637 Translocator protein1.7e-0428.1Show/hide
Query:  RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWAD-GGF-HGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNP
        R + + ++P+W  P W L           G  +++VW + GGF   A   L +Y   L+L+  W P+ F  R +  A    +L   +  A   ++ R++P
Subjt:  RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWAD-GGF-HGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNP

Query:  FAKDLIKPYLAWTLYLSAVTY
         A  L+ PYLAW  + + + Y
Subjt:  FAKDLIKPYLAWTLYLSAVTY

Q6UN27 Translocator protein8.5e-0428.7Show/hide
Query:  RRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWAD-GGF-HGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLI
        ++P+W  P W L           G  ++++W + GGF   A   L +Y   L+L+  W PL F  R +  A    VL   +  A   ++ +++P A  L+
Subjt:  RRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWAD-GGF-HGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLI

Query:  KPYLAWTLYLSAVTY
         PYLAW  + + + Y
Subjt:  KPYLAWTLYLSAVTY

Q9GMC9 Translocator protein5.9e-0526.45Show/hide
Query:  RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALP--IYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNP
        R + + ++P W  P W+L           G  ++L+W + G     + +P  +Y   L+L+  W PL F  R +  AF   +L   +  A   ++++++P
Subjt:  RHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALP--IYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNP

Query:  FAKDLIKPYLAWTLYLSAVTY
         A  L+ PYLAW  + + + Y
Subjt:  FAKDLIKPYLAWTLYLSAVTY

Arabidopsis top hitse value%identityAlignment
AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related2.0e-2435.8Show/hide
Query:  STMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFGR---HFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAH
        S   +K + + K   AKR L+SL V+VA P+ + + A +  G    +    +  +W+ PLWLLH + + S+ L G+AAWLVW DGGFH   +AL +Y+A 
Subjt:  STMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFGR---HFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWLVWADGGFHGASSALPIYVAH

Query:  LSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAV
          L ++W+P+ F   + +    + +     LF  Y++F  ++P A +L+KP LAW  +++AV
Subjt:  LSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCCCATCTAAATTCCCTCTTCAGCGCTCCATATATCCTCCTTTAATTACCCCCAAATTTCATCTCCATTTTGCCCTAATTTCCCAAATCAACTCAACCATGTC
TTCCAAATCCAGACCAGAATCCAAATACACGAAGGCCAAGCGAGCGCTCCGATCCCTCGCCGTCTCCGTCGCCATTCCCCTGACCCTCAGAATCGCCGCCATCTTCCTCT
TCGGGCGCCACTTCCCCACCCGGAGGCGCCCGGCCTGGGTGGCGCCGCTCTGGCTCCTCCACCTCTCCTCCGTCGGCTCCGCCTTCCTCACCGGCGTCGCCGCCTGGCTC
GTCTGGGCCGACGGCGGCTTCCACGGCGCCTCCTCCGCCCTCCCCATCTACGTCGCGCACCTCTCCCTCAGCATCCTCTGGAACCCTCTGGTGTTCGCCAATCGCGCTCT
CCTCCTTGCGTTTCCGTTGTGCGTTTTGGACTTTGTGATTCTGTTCGCTCTTTATCGCTCTTTCAAGCGCCTCAATCCCTTCGCCAAGGATCTCATCAAGCCTTACTTGG
CTTGGACTCTCTATCTCTCTGCTGTTACTTATTTGTTCATTGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
GAAGTTTATTTCCATTCAAAATGAAATTGCTGATTGCACAAATAACTTTAGAAATAAAGCTTGGAATTTAAATTTAATTAAGGAGATAAGTTGAAATAGAGGCCTAAAAT
GTACGGTAGATATAAGGCATATGATATGAATCCTTAAAGCCATGCAACAATGGAAGGCCCATCTAAATTCCCTCTTCAGCGCTCCATATATCCTCCTTTAATTACCCCCA
AATTTCATCTCCATTTTGCCCTAATTTCCCAAATCAACTCAACCATGTCTTCCAAATCCAGACCAGAATCCAAATACACGAAGGCCAAGCGAGCGCTCCGATCCCTCGCC
GTCTCCGTCGCCATTCCCCTGACCCTCAGAATCGCCGCCATCTTCCTCTTCGGGCGCCACTTCCCCACCCGGAGGCGCCCGGCCTGGGTGGCGCCGCTCTGGCTCCTCCA
CCTCTCCTCCGTCGGCTCCGCCTTCCTCACCGGCGTCGCCGCCTGGCTCGTCTGGGCCGACGGCGGCTTCCACGGCGCCTCCTCCGCCCTCCCCATCTACGTCGCGCACC
TCTCCCTCAGCATCCTCTGGAACCCTCTGGTGTTCGCCAATCGCGCTCTCCTCCTTGCGTTTCCGTTGTGCGTTTTGGACTTTGTGATTCTGTTCGCTCTTTATCGCTCT
TTCAAGCGCCTCAATCCCTTCGCCAAGGATCTCATCAAGCCTTACTTGGCTTGGACTCTCTATCTCTCTGCTGTTACTTATTTGTTCATTGATCTTTGATTCTCCATTTT
TTTCACATTCTTGTTTACGAATTTTAGGGATTTCTTTTTCTTTTTCTTTTTTTTATGAGGGATGGGTAAAAAGAATTTTGTTTTTTTCTTTTTCTTTACTGTAAATTGGG
TGAGGAGAATGAGGAGAACGACGG
Protein sequenceShow/hide protein sequence
MEGPSKFPLQRSIYPPLITPKFHLHFALISQINSTMSSKSRPESKYTKAKRALRSLAVSVAIPLTLRIAAIFLFGRHFPTRRRPAWVAPLWLLHLSSVGSAFLTGVAAWL
VWADGGFHGASSALPIYVAHLSLSILWNPLVFANRALLLAFPLCVLDFVILFALYRSFKRLNPFAKDLIKPYLAWTLYLSAVTYLFIDL