; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010115 (gene) of Chayote v1 genome

Gene IDSed0010115
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase RNF4-like
Genome locationLG01:70529885..70536986
RNA-Seq ExpressionSed0010115
SyntenySed0010115
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144388.1 E3 ubiquitin-protein ligase RNF4 [Cucumis sativus]9.5e-7273.56Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRGHT R    RKSL+LDLN +PP EN+D  E SQL +Q+AQVNQQQ +Q  +ID++ IDDDVIES+A AFAEAKNKSRRN R N+VDVDA   +
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR
        + SRVSNN R KRRR +SN+ +VN++LLINLEASN S K KPAPP EPKFSCPICM P VEETST+CGHIFCKACIRAAI VQSKCPTCRK+VTAKELIR
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR

Query:  VYLPGTSL
        V+LPGTSL
Subjt:  VYLPGTSL

XP_008460369.1 PREDICTED: E3 ubiquitin-protein ligase RNF4-like isoform X1 [Cucumis melo]1.6e-7173.56Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRGH  R    RKSL+LDLN +PP EN+D  E SQL +Q+AQVNQQQ +Q  +ID++ IDDDVIES+A AFAEAKNKSRRN R N+VDVDA   +
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR
        + SRVSNN R KRRR +SN+ +VN++LLINLEASN S K KPAPP EPKFSCPICM P VEETSTKCGHIFCKACIRAAI VQSKCPTCRK+VTAKELIR
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR

Query:  VYLPGTSL
        V+LPGTSL
Subjt:  VYLPGTSL

XP_022158086.1 E3 ubiquitin-protein ligase RNF4 isoform X1 [Momordica charantia]1.5e-7275.24Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRG TAR    RKSL+LDLN +PP+EN+D  E SQL +QEA  NQQQ LQ T+ID++ IDDDVIES+A AFAEAKNKSRRN R NIVDVDA   +
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRS--TKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKEL
        + SRVSNN R KRRR++SNQRTVN+NLLINLEASN S   K+KP PP EPKFSCPICM P VEETST+CGHIFCKACI+AAIAVQSKCPTCRK+VTAKEL
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRS--TKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKEL

Query:  IRVYLPGTSL
        IRV+LPGTSL
Subjt:  IRVYLPGTSL

XP_022158096.1 E3 ubiquitin-protein ligase RNF4 isoform X2 [Momordica charantia]4.6e-7475.96Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRG TAR    RKSL+LDLN +PP+EN+D  E SQL +QEA  NQQQ LQ T+ID++ IDDDVIES+A AFAEAKNKSRRN R NIVDVDA   +
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR
        + SRVSNN R KRRR++SNQRTVN+NLLINLEASN S K+KP PP EPKFSCPICM P VEETST+CGHIFCKACI+AAIAVQSKCPTCRK+VTAKELIR
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR

Query:  VYLPGTSL
        V+LPGTSL
Subjt:  VYLPGTSL

XP_038888129.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida]1.9e-7274.52Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRGHTAR    RKSL+LDLN +PP EN+D  E SQL  QEAQVNQQQ +Q  +ID++ IDDDVIES+A AFAEAKNKSRRN R NIVDVDA   +
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR
        + ++VSNN R KRRR +SNQ+ VN++LLINLEASN S K KPAPP EPKFSCPICM P VEETST+CGHIFCKACIRAAIAVQ+KCPTCRK+VTAKELIR
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR

Query:  VYLPGTSL
        V+LPGTSL
Subjt:  VYLPGTSL

TrEMBL top hitse value%identityAlignment
A0A1S3CBW2 E3 ubiquitin-protein ligase RNF4-like isoform X21.3e-7173.56Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRGH  R    RKSL+LDLN +PP EN+D  E SQL +Q+AQVNQQQ +Q  +ID++ IDDDVIES+A AFAEAKNKSRRN R N+VDVDA    
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR
        + SRVSNN R KRRR +SN+ +VN++LLINLEASN S K KPAPP EPKFSCPICM P VEETSTKCGHIFCKACIRAAI VQSKCPTCRK+VTAKELIR
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR

Query:  VYLPGTSL
        V+LPGTSL
Subjt:  VYLPGTSL

A0A1S3CCB4 E3 ubiquitin-protein ligase RNF4-like isoform X17.9e-7273.56Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRGH  R    RKSL+LDLN +PP EN+D  E SQL +Q+AQVNQQQ +Q  +ID++ IDDDVIES+A AFAEAKNKSRRN R N+VDVDA   +
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR
        + SRVSNN R KRRR +SN+ +VN++LLINLEASN S K KPAPP EPKFSCPICM P VEETSTKCGHIFCKACIRAAI VQSKCPTCRK+VTAKELIR
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR

Query:  VYLPGTSL
        V+LPGTSL
Subjt:  VYLPGTSL

A0A6J1DZZ9 E3 ubiquitin-protein ligase RNF4 isoform X17.1e-7375.24Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRG TAR    RKSL+LDLN +PP+EN+D  E SQL +QEA  NQQQ LQ T+ID++ IDDDVIES+A AFAEAKNKSRRN R NIVDVDA   +
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRS--TKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKEL
        + SRVSNN R KRRR++SNQRTVN+NLLINLEASN S   K+KP PP EPKFSCPICM P VEETST+CGHIFCKACI+AAIAVQSKCPTCRK+VTAKEL
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRS--TKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKEL

Query:  IRVYLPGTSL
        IRV+LPGTSL
Subjt:  IRVYLPGTSL

A0A6J1E010 E3 ubiquitin-protein ligase RNF4 isoform X22.2e-7475.96Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRG TAR    RKSL+LDLN +PP+EN+D  E SQL +QEA  NQQQ LQ T+ID++ IDDDVIES+A AFAEAKNKSRRN R NIVDVDA   +
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR
        + SRVSNN R KRRR++SNQRTVN+NLLINLEASN S K+KP PP EPKFSCPICM P VEETST+CGHIFCKACI+AAIAVQSKCPTCRK+VTAKELIR
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR

Query:  VYLPGTSL
        V+LPGTSL
Subjt:  VYLPGTSL

A0A6J1HQI7 E3 ubiquitin-protein ligase RNF4-like1.0e-7173.56Show/hide
Query:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED
        MST AMRGHTAR    RKSL+LDLN +PP EN+D  E SQ   QEAQVNQQQS+Q  +ID++ IDDDVIES+A AFAEAKNKSRRN R NIVDVDA   +
Subjt:  MSTHAMRGHTARD-RCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAED

Query:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR
        + SR SNN R KRRR + NQ+TVN++LLINLEASN S K+K APP EP FSCPICM P VEETST+CGHIFCKACI+ AIAVQSKCPTCRK+VTAKELIR
Subjt:  QGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPP-EPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIR

Query:  VYLPGTSL
        V+LPGTSL
Subjt:  VYLPGTSL

SwissProt top hitse value%identityAlignment
O88846 E3 ubiquitin-protein ligase RNF41.4e-0424.43Show/hide
Query:  ESQLVVQEAQVNQQQSLQLTLID-VDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNR
        ++Q   +E     + SL+   I+ V+ + D++++ T  +          N    IV+        G R+  ++         ++       +     + R
Subjt:  ESQLVVQEAQVNQQQSLQLTLID-VDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNR

Query:  STKQKPAP---PEPKFSCPICMCPFVE-------ETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRVYL
        STK +      P    SCPICM  + E         ST+CGH+FC  C+R ++   + CPTCRKK+  K    +Y+
Subjt:  STKQKPAP---PEPKFSCPICMCPFVE-------ETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRVYL

P19474 E3 ubiquitin-protein ligase TRIM212.7e-0546.94Show/hide
Query:  SCPICMCPFVEETSTKCGHIFCKACI-RAAIAVQSKCPTCRKKVTAKEL
        +CPIC+ PFVE  S +CGH FC+ CI +      S CP CR++   K L
Subjt:  SCPICMCPFVEETSTKCGHIFCKACI-RAAIAVQSKCPTCRKKVTAKEL

P78317 E3 ubiquitin-protein ligase RNF43.6e-0524.65Show/hide
Query:  MSTHAMRGHTARDRCRKSLNLDLNCLP----PAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPR---NNIVDV
        MST   RG     R  +    +    P     AE  +LVE +            + + LT   ++ +  D+  + +    + + + RRN R    +  D 
Subjt:  MSTHAMRGHTARDRCRKSLNLDLNCLP----PAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPR---NNIVDV

Query:  DAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPPEPKFSCPICMCPFVE-------ETSTKCGHIFCKACIRAAIAVQSKCPT
          V+ D               +LS  R V   +  +   + R        P    SCPICM  + E         ST+CGH+FC  C+R ++   + CPT
Subjt:  DAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPPEPKFSCPICMCPFVE-------ETSTKCGHIFCKACIRAAIAVQSKCPT

Query:  CRKKVTAKELIRVYL
        CRKK+  K    +Y+
Subjt:  CRKKVTAKELIRVYL

Q9CQ29 RING finger protein 1512.9e-0743.1Show/hide
Query:  APPEPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRV
        +PP+ KF C +C       T   C HIFCK CI   +A Q+ CP CRK+VT ++++ V
Subjt:  APPEPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRV

Q9QZS2 E3 ubiquitin-protein ligase RNF46.1e-0525Show/hide
Query:  ESQLVVQEAQVNQQQSLQLTLID-VDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNR
        ++Q   +E     + SL+   I+ V+ + D++++ T  +          N    IV+        G R+  ++         ++       +     + R
Subjt:  ESQLVVQEAQVNQQQSLQLTLID-VDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNR

Query:  STKQKPAP---PEPKFSCPICMCPFVE-------ETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRVYL
        STK   A    P    SCPICM  + E         ST+CGH+FC  C+R ++   + CPTCRKK+  K    +Y+
Subjt:  STKQKPAP---PEPKFSCPICMCPFVE-------ETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRVYL

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein4.2e-3352.82Show/hide
Query:  DDDVIESTATAFAEAKNKSRRNPR-NNIVDVDAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPPEPKFSCPICMCPFVEETS
        DDDV+ESTA+AFA+AKNKSR   R + +VDV++   +         R  RRR  S+Q +V++   + L    +S    P   EPKFSCPIC+CPF +E S
Subjt:  DDDVIESTATAFAEAKNKSRRNPR-NNIVDVDAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPPEPKFSCPICMCPFVEETS

Query:  TKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRVYLPGT
        TKCGHIFCK CI+ A+++Q+KCPTCRKK+T K+LIRV+LP T
Subjt:  TKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRVYLPGT

AT3G07200.2 RING/U-box superfamily protein4.2e-3352.82Show/hide
Query:  DDDVIESTATAFAEAKNKSRRNPR-NNIVDVDAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPPEPKFSCPICMCPFVEETS
        DDDV+ESTA+AFA+AKNKSR   R + +VDV++   +         R  RRR  S+Q +V++   + L    +S    P   EPKFSCPIC+CPF +E S
Subjt:  DDDVIESTATAFAEAKNKSRRNPR-NNIVDVDAVAEDQGSRVSNNYRGKRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPPEPKFSCPICMCPFVEETS

Query:  TKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRVYLPGT
        TKCGHIFCK CI+ A+++Q+KCPTCRKK+T K+LIRV+LP T
Subjt:  TKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRVYLPGT

AT5G48655.1 RING/U-box superfamily protein6.2e-3748.1Show/hide
Query:  MSTHAMRGHTARDRCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQ
        M+T  +R    R   R+   +DLN +P  +         L V    +   Q    T+IDVD I+DDVIES+A+AFAEAK+KS RN R   + VD V    
Subjt:  MSTHAMRGHTARDRCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQ

Query:  GSRVSNNYRGKRRRQLSNQRTV-----NTNLLINLEAS-NRSTKQKPAPPEPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAK
         +R   N   KRRR  S++  +     + N  +N+ +  +RS    P P EPKF+CPICMCPF EE STKCGHIFCK CI+ AI+ Q KCPTCRKKVTAK
Subjt:  GSRVSNNYRGKRRRQLSNQRTV-----NTNLLINLEAS-NRSTKQKPAPPEPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAK

Query:  ELIRVYLPGT
        ELIRV+LP T
Subjt:  ELIRVYLPGT

AT5G48655.2 RING/U-box superfamily protein6.2e-3748.1Show/hide
Query:  MSTHAMRGHTARDRCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQ
        M+T  +R    R   R+   +DLN +P  +         L V    +   Q    T+IDVD I+DDVIES+A+AFAEAK+KS RN R   + VD V    
Subjt:  MSTHAMRGHTARDRCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQ

Query:  GSRVSNNYRGKRRRQLSNQRTV-----NTNLLINLEAS-NRSTKQKPAPPEPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAK
         +R   N   KRRR  S++  +     + N  +N+ +  +RS    P P EPKF+CPICMCPF EE STKCGHIFCK CI+ AI+ Q KCPTCRKKVTAK
Subjt:  GSRVSNNYRGKRRRQLSNQRTV-----NTNLLINLEAS-NRSTKQKPAPPEPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAK

Query:  ELIRVYLPGT
        ELIRV+LP T
Subjt:  ELIRVYLPGT

AT5G48655.3 RING/U-box superfamily protein6.2e-3748.1Show/hide
Query:  MSTHAMRGHTARDRCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQ
        M+T  +R    R   R+   +DLN +P  +         L V    +   Q    T+IDVD I+DDVIES+A+AFAEAK+KS RN R   + VD V    
Subjt:  MSTHAMRGHTARDRCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQ

Query:  GSRVSNNYRGKRRRQLSNQRTV-----NTNLLINLEAS-NRSTKQKPAPPEPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAK
         +R   N   KRRR  S++  +     + N  +N+ +  +RS    P P EPKF+CPICMCPF EE STKCGHIFCK CI+ AI+ Q KCPTCRKKVTAK
Subjt:  GSRVSNNYRGKRRRQLSNQRTV-----NTNLLINLEAS-NRSTKQKPAPPEPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAK

Query:  ELIRVYLPGT
        ELIRV+LP T
Subjt:  ELIRVYLPGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACTCACGCAATGAGAGGACATACCGCCAGAGATCGTTGTAGGAAATCATTAAACTTGGACCTAAACTGCTTGCCACCAGCTGAAAACCAAGATCTAGTGGAGGA
ATCTCAATTGGTGGTTCAAGAAGCACAAGTTAATCAACAACAGTCTTTACAACTTACACTGATTGACGTTGATGTCATTGACGATGATGTTATTGAATCAACCGCCACAG
CTTTTGCTGAAGCTAAAAATAAATCCAGACGGAATCCTAGGAATAATATTGTTGATGTGGATGCAGTTGCAGAAGATCAGGGCAGCAGGGTGTCAAATAATTACCGGGGC
AAGCGTAGGAGACAATTGTCAAATCAGCGAACTGTAAACACCAATTTATTAATCAATTTGGAAGCCAGCAACAGATCTACGAAGCAGAAGCCCGCTCCACCAGAGCCCAA
ATTCAGTTGTCCAATATGCATGTGTCCGTTCGTGGAAGAAACATCAACGAAATGTGGTCATATTTTCTGCAAGGCATGCATCAGGGCTGCAATAGCCGTCCAGAGCAAAT
GCCCAACCTGTAGGAAAAAAGTAACTGCCAAAGAACTCATTCGAGTGTACCTTCCCGGGACAAGCTTGCCGTGA
mRNA sequenceShow/hide mRNA sequence
CTCTGCCGCACTTCGATTTTGGTCTCAAATCCCTTCAATTTCTTAGCATTTTAGAACCCCCAATTACATATAATCACAAACCCTAAATCCAAAACTTCAATCACATCTAT
CAAACACCGTTAATTTCAAGGCTTTGAGGAGCTCCAAAATAGATGAGTACTCACGCAATGAGAGGACATACCGCCAGAGATCGTTGTAGGAAATCATTAAACTTGGACCT
AAACTGCTTGCCACCAGCTGAAAACCAAGATCTAGTGGAGGAATCTCAATTGGTGGTTCAAGAAGCACAAGTTAATCAACAACAGTCTTTACAACTTACACTGATTGACG
TTGATGTCATTGACGATGATGTTATTGAATCAACCGCCACAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGGAATCCTAGGAATAATATTGTTGATGTGGATGCAGTT
GCAGAAGATCAGGGCAGCAGGGTGTCAAATAATTACCGGGGCAAGCGTAGGAGACAATTGTCAAATCAGCGAACTGTAAACACCAATTTATTAATCAATTTGGAAGCCAG
CAACAGATCTACGAAGCAGAAGCCCGCTCCACCAGAGCCCAAATTCAGTTGTCCAATATGCATGTGTCCGTTCGTGGAAGAAACATCAACGAAATGTGGTCATATTTTCT
GCAAGGCATGCATCAGGGCTGCAATAGCCGTCCAGAGCAAATGCCCAACCTGTAGGAAAAAAGTAACTGCCAAAGAACTCATTCGAGTGTACCTTCCCGGGACAAGCTTG
CCGTGAGGCTTATACGATTTTATTTTTTTCAAGACTTTGAAGAAATTTTCTTGTAAGTAAGAAAAGCTAATTTTTAGGAGGAAATTTCAGGTGCATTATGCAGATGGCTG
CTTCACTTTGATGATCTTAGACTTGCAATAGAGAAGTTAGGAAATTTGAATTTGCCTATTTTTTGGTTACTTACTTTTGATGCTTTTCTGCAGTTGTAAACGAACTGACA
TTGAAATCCAATAGCAATGGAATAAGATTTATCTAC
Protein sequenceShow/hide protein sequence
MSTHAMRGHTARDRCRKSLNLDLNCLPPAENQDLVEESQLVVQEAQVNQQQSLQLTLIDVDVIDDDVIESTATAFAEAKNKSRRNPRNNIVDVDAVAEDQGSRVSNNYRG
KRRRQLSNQRTVNTNLLINLEASNRSTKQKPAPPEPKFSCPICMCPFVEETSTKCGHIFCKACIRAAIAVQSKCPTCRKKVTAKELIRVYLPGTSLP