CuGenDBv2

Gene ID	Sed0010124
Organism	Sechium edule (Chayote v1)
Description	DUF4228 domain protein
Genome location	LG08:21664831..21665442
RNA-Seq Expression	Sed0010124
Synteny	Sed0010124
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0056017.1 DUF4228 domain protein [Cucumis melo var. makuwa]

3.7e-76

70.89

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Query:  MGNGF-PCFLSISFSKRR-RSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS
        MGN   PC +SIS S RR R S VKL+F+DG TK L GN+H A EIMFQFP MM+CHA SFFIGHPIPSL I+DEL+ GETY V P+D F+S+D+LSTSS
Subjt:  MGNGF-PCFLSISFSKRR-RSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS

Query:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP
        LA +GA N+  EK SGPCPFEYVR  NG VLIKV PEFI++LISPAA DGG           STPELKKHYD+LVGS KGQVWSPKLETISEYKI RYSP
Subjt:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP

Query:  CKFVGFKCKQKEG
        C+FVGFK KQKEG
Subjt:  CKFVGFKCKQKEG

XP_004139126.1 uncharacterized protein LOC101216872 [Cucumis sativus]

3.7e-76

70.89

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Query:  MGNGF-PCFLSISFSK-RRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS
        MGN   PC LSIS S+  RR STVKL+F++G TK LAG++H A EIMFQFP MM+CHA SFFIGHPIPSL I+D+LIAGETY + P+D F+S+D+LSTSS
Subjt:  MGNGF-PCFLSISFSK-RRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS

Query:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP
        LA +GA N+ VEK SGPCPFEYVR  NG+VLIKV PEFI++LIS AA DGG           STPELKKHYD+LVGS KGQVWSPKLETISEYKI RYSP
Subjt:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP

Query:  CKFVGFKCKQKEG
        C+FVGFK KQKEG
Subjt:  CKFVGFKCKQKEG

XP_008450347.1 PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo]

2.8e-76

70.89

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Query:  MGNGF-PCFLSISFSKRR-RSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS
        MGN   PC +SIS S RR R S VKL+F+DG TK L GN+H A EIMFQFP MM+CHA SFFIGHPIPSL I+DEL+ GETY V P+D F+S+D+LSTSS
Subjt:  MGNGF-PCFLSISFSKRR-RSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS

Query:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP
        LA +GA N+  EK SGPCPFEYVR  NG VLIKV PEFI++LISPAA DGG           STPELKKHYD+LVGS KGQVWSPKLETISEYKI RYSP
Subjt:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP

Query:  CKFVGFKCKQKEG
        C+FVGFK KQKEG
Subjt:  CKFVGFKCKQKEG

XP_022927436.1 uncharacterized protein LOC111434260 [Cucurbita moschata]

3.1e-75

72.33

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Query:  MGN--GFPCFLSISFSKRRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS
        MGN    PC++SIS S RRRSS VKL+FSDG T++L G +H+A EIMF+FP  MICHA SFFIGH IPSLG +D+LIAGETYF+ PLDLF+S D+L+TSS
Subjt:  MGN--GFPCFLSISFSKRRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS

Query:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNKFL-STPELKKHYDELVGSKGQVWSPKLETISEYKIRRYSPCKFVGFK
        LAALGAQ     K SGPCPFEYVR+ NG VLIKV PEFIL+LISPA   GG +FL STPELKKHYD+LVGSKG VWSPKLE+ISEY+I R+SP KFVGFK
Subjt:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNKFL-STPELKKHYDELVGSKGQVWSPKLETISEYKIRRYSPCKFVGFK

Query:  CKQKEG
         KQKEG
Subjt:  CKQKEG

XP_038880154.1 uncharacterized protein LOC120071833 [Benincasa hispida]

3.7e-76

71.23

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Query:  MGN-GFPCFLSISFSKRRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSSL
        MGN   PCFLSIS S RRR+S VKLIFS+G T+ L GN+H+A EIMFQFP MM+CHA SFFIGHPIPSL IND+L+ GETY V P+D F+S+D+LSTSSL
Subjt:  MGN-GFPCFLSISFSKRRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSSL

Query:  AALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVG-SKGQVWSPKLETISEYKIRRYSPC
        A + A N   EK SGPCPFEYVR  NG VLIKV PEFI++LIS AA DGG           STPELKKHYD+LVG SKGQVWSPKLETISEYKI RYSPC
Subjt:  AALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVG-SKGQVWSPKLETISEYKIRRYSPC

Query:  KFVGFKCKQKEG
        +FVGFK KQKEG
Subjt:  KFVGFKCKQKEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LZV5 Uncharacterized protein

1.8e-76

70.89

Show/hide

Query:  MGNGF-PCFLSISFSK-RRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS
        MGN   PC LSIS S+  RR STVKL+F++G TK LAG++H A EIMFQFP MM+CHA SFFIGHPIPSL I+D+LIAGETY + P+D F+S+D+LSTSS
Subjt:  MGNGF-PCFLSISFSK-RRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS

Query:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP
        LA +GA N+ VEK SGPCPFEYVR  NG+VLIKV PEFI++LIS AA DGG           STPELKKHYD+LVGS KGQVWSPKLETISEYKI RYSP
Subjt:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP

Query:  CKFVGFKCKQKEG
        C+FVGFK KQKEG
Subjt:  CKFVGFKCKQKEG

A0A1S3BP11 uncharacterized protein LOC103491983

1.4e-76

70.89

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Query:  MGNGF-PCFLSISFSKRR-RSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS
        MGN   PC +SIS S RR R S VKL+F+DG TK L GN+H A EIMFQFP MM+CHA SFFIGHPIPSL I+DEL+ GETY V P+D F+S+D+LSTSS
Subjt:  MGNGF-PCFLSISFSKRR-RSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS

Query:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP
        LA +GA N+  EK SGPCPFEYVR  NG VLIKV PEFI++LISPAA DGG           STPELKKHYD+LVGS KGQVWSPKLETISEYKI RYSP
Subjt:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP

Query:  CKFVGFKCKQKEG
        C+FVGFK KQKEG
Subjt:  CKFVGFKCKQKEG

A0A5A7UN34 DUF4228 domain protein

1.8e-76

70.89

Show/hide

Query:  MGNGF-PCFLSISFSKRR-RSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS
        MGN   PC +SIS S RR R S VKL+F+DG TK L GN+H A EIMFQFP MM+CHA SFFIGHPIPSL I+DEL+ GETY V P+D F+S+D+LSTSS
Subjt:  MGNGF-PCFLSISFSKRR-RSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS

Query:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP
        LA +GA N+  EK SGPCPFEYVR  NG VLIKV PEFI++LISPAA DGG           STPELKKHYD+LVGS KGQVWSPKLETISEYKI RYSP
Subjt:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNK-------FLSTPELKKHYDELVGS-KGQVWSPKLETISEYKIRRYSP

Query:  CKFVGFKCKQKEG
        C+FVGFK KQKEG
Subjt:  CKFVGFKCKQKEG

A0A6J1EHN5 uncharacterized protein LOC111434260

1.5e-75

72.33

Show/hide

Query:  MGN--GFPCFLSISFSKRRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS
        MGN    PC++SIS S RRRSS VKL+FSDG T++L G +H+A EIMF+FP  MICHA SFFIGH IPSLG +D+LIAGETYF+ PLDLF+S D+L+TSS
Subjt:  MGN--GFPCFLSISFSKRRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS

Query:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNKFL-STPELKKHYDELVGSKGQVWSPKLETISEYKIRRYSPCKFVGFK
        LAALGAQ     K SGPCPFEYVR+ NG VLIKV PEFIL+LISPA   GG +FL STPELKKHYD+LVGSKG VWSPKLE+ISEY+I R+SP KFVGFK
Subjt:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNKFL-STPELKKHYDELVGSKGQVWSPKLETISEYKIRRYSPCKFVGFK

Query:  CKQKEG
         KQKEG
Subjt:  CKQKEG

A0A6J1KR03 uncharacterized protein LOC111496859

2.2e-74

70.67

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Query:  MGN--GFPCFLSISFSKRRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS
        MGN    PC++SIS S RRRSS VKL+FSDG T++L G +H+A EIMF+FP  MICHA SFFIGH +PSLG +D+LI GETYF+ PLDLF+S D+L+TSS
Subjt:  MGN--GFPCFLSISFSKRRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSS

Query:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAAD--GGNKFL-STPELKKHYDELVGSKGQVWSPKLETISEYKIRRYSPCKFVG
        LAALGAQ     K SGPCPFEYVR+ NG VLIKV PEFIL+LISPA +D  GG +FL STPELKKHYD+LVG+KG VW+PKLE+ISEYKI R+SP KFVG
Subjt:  LAALGAQNVDVEKLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAAD--GGNKFL-STPELKKHYDELVGSKGQVWSPKLETISEYKIRRYSPCKFVG

Query:  FKCKQKEG
        FK KQKEG
Subjt:  FKCKQKEG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G28190.1 unknown protein

1.4e-12

31.11

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Query:  VKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLF-SSLDILSTSSLAALGAQNVDVEKL-SGPCPFE
        +KL+ SDG  ++      +  E+   FP   IC +   +IG   P L   + L  G  YF+ P D F + L  L+ ++L       V V+K    P PF 
Subjt:  VKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLF-SSLDILSTSSLAALGAQNVDVEKL-SGPCPFE

Query:  YVRSPNGEVL-IKVKPEFILQLI--------------SPAAADGGNKFLSTPELKKHYDELVGSKGQVWSPKLETISEYK
          +   GE L I+V  EF+ +L+                   +G  +  +T +LKK Y +LVG +   W PKLETI+E K
Subjt:  YVRSPNGEVL-IKVKPEFILQLI--------------SPAAADGGNKFLSTPELKKHYDELVGSKGQVWSPKLETISEYK

AT5G12340.1 unknown protein

1.0e-39

45.41

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Query:  RRRSSTVKLIFSDGL-TKILAG-NNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSSLAALGAQNVDVEK--
        RRR   V L+F + + TK L G   H+A EIMF+FP  ++CHA SF+IG  IP+L ++D LI G+TYFV P++ F    IL+TS L+   +   +V    
Subjt:  RRRSSTVKLIFSDGL-TKILAG-NNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSSLAALGAQNVDVEK--

Query:  -------LSGPCPFEYVRSPNGEVLIKVKPEFILQLI--------SPAAADGGNKFL-STPELKKHYDELVGSKGQVWSPKLETISEYKIRRYSPCKFVG
                S P PFEY + PNG++LIKV PEFI+ LI          A + G N  + ++PELKK YD+LVG++  +WSP L+TISE+KI R SP +F G
Subjt:  -------LSGPCPFEYVRSPNGEVLIKVKPEFILQLI--------SPAAADGGNKFL-STPELKKHYDELVGSKGQVWSPKLETISEYKIRRYSPCKFVG

Query:  FKCKQKE
           KQ E
Subjt:  FKCKQKE

Sequences

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CDS sequence

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ATGGGCAATGGCTTCCCATGTTTTCTTTCAATTTCCTTTTCCAAGCGTCGCCGCTCCTCCACCGTCAAGCTCATCTTCTCCGACGGCCTAACTAAAATCCTCGCCGGAAA
CAACCACCTAGCCCGCGAGATCATGTTTCAATTCCCCCTCATGATGATCTGCCATGCCCATTCCTTCTTCATCGGCCACCCCATCCCCTCCTTGGGCATCAACGACGAGC
TCATTGCCGGCGAGACCTACTTCGTTTTCCCGCTCGATCTATTCTCCTCCCTCGACATTCTCTCCACGTCGTCGCTTGCTGCGCTCGGGGCCCAAAATGTGGACGTGGAG
AAATTATCAGGGCCGTGTCCGTTTGAGTACGTTCGTAGCCCGAATGGAGAAGTATTGATTAAGGTGAAGCCGGAATTTATACTCCAGTTGATTTCTCCAGCGGCAGCTGA
TGGTGGAAATAAGTTTCTGAGTACGCCGGAGTTAAAGAAACATTACGATGAGCTTGTTGGATCGAAGGGACAAGTTTGGTCGCCGAAATTGGAGACTATTTCAGAGTATA
AAATTAGGAGGTATTCGCCCTGTAAATTTGTAGGGTTTAAATGTAAACAGAAAGAAGGCTAA

mRNA sequence

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Protein sequence

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MGNGFPCFLSISFSKRRRSSTVKLIFSDGLTKILAGNNHLAREIMFQFPLMMICHAHSFFIGHPIPSLGINDELIAGETYFVFPLDLFSSLDILSTSSLAALGAQNVDVE
KLSGPCPFEYVRSPNGEVLIKVKPEFILQLISPAAADGGNKFLSTPELKKHYDELVGSKGQVWSPKLETISEYKIRRYSPCKFVGFKCKQKEG

Sed0010124 (gene) of Chayote v1 genome