; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010166 (gene) of Chayote v1 genome

Gene IDSed0010166
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
Genome locationLG02:48357749..48359020
RNA-Seq ExpressionSed0010166
SyntenySed0010166
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582143.1 hypothetical protein SDJN03_22145, partial [Cucurbita argyrosperma subsp. sororia]3.9e-8177.56Show/hide
Query:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP
        MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CFDIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP
Subjt:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP

Query:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG
         CSDP FAF  G +S G+ QSE     LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALERLA+LVLQEKD  G+  +NG
Subjt:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG

Query:  DAIAG
        +A AG
Subjt:  DAIAG

KAG7018542.1 hypothetical protein SDJN02_20411, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-8177.56Show/hide
Query:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP
        MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CFDIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP
Subjt:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP

Query:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG
         CSDP FAF  G +S G+ QSE     LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALERLA+LVLQEKD  G+  +NG
Subjt:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG

Query:  DAIAG
        +A AG
Subjt:  DAIAG

XP_022955770.1 uncharacterized protein LOC111457661 [Cucurbita moschata]3.9e-8177.56Show/hide
Query:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP
        MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CFDIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP
Subjt:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP

Query:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG
         CSDP FAF  G +S G+ QSE     LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALERLA+LVLQEKD  G+  +NG
Subjt:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG

Query:  DAIAG
        +A AG
Subjt:  DAIAG

XP_023527750.1 uncharacterized protein LOC111790876 [Cucurbita pepo subsp. pepo]5.0e-8177.56Show/hide
Query:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP
        MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CFDIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP
Subjt:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP

Query:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG
         CSDP FAF  G +SGG+ QSE     LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALERLAYLVL  KD  G+  +NG
Subjt:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG

Query:  DAIAG
        +A AG
Subjt:  DAIAG

XP_038902666.1 uncharacterized protein LOC120089301 [Benincasa hispida]1.2e-8277.88Show/hide
Query:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP
        MNR H N+ QSNS+S C+ECGISQS CWILHNVRLKAS RRLCTNCVLK+NLSRFCP+CFD+YDD+T PPSHQRVMCFRCPSISHLSC SFRFSSTFLCP
Subjt:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP

Query:  SCSDPRFAFLHGSESGGVSQSESVEPGLA--GVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNS
         CSDP FAF  G +SGG+ QSES    LA   VD +SAKAIV AAR++AQS+RRAA  ARAVAEMKIKNAAFAKKQA LALERLAYLVLQEKD  G+  +
Subjt:  SCSDPRFAFLHGSESGGVSQSESVEPGLA--GVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNS

Query:  NGDAIAGE
        NGDA+AGE
Subjt:  NGDAIAGE

TrEMBL top hitse value%identityAlignment
A0A0A0L5G4 Uncharacterized protein1.9e-7874.64Show/hide
Query:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP
        MNR H N+ QSNSIS C++CGISQS CWILHNVR KA+ RRLCTNCVLK+NLSRFCP+CFD+Y+D+T PPSH RVMCFRCPSISHLSC+SFRFSSTFLCP
Subjt:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP

Query:  SCSDPRFAFLHGSESGG-VSQSESVEPGLAG--VDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVN
         CSDPRF F  G +SGG + QSES    LAG  VD +S KAIV AAR++AQS+RRAA  ARAVAEMKIKNAAFAKKQA LALE+LAYLVLQEKD  G+  
Subjt:  SCSDPRFAFLHGSESGG-VSQSESVEPGLAG--VDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVN

Query:  SNGDAIAGE
        SNGDA+  E
Subjt:  SNGDAIAGE

A0A6J1FY52 uncharacterized protein LOC1114483566.7e-7978.11Show/hide
Query:  QSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAF
        QSNSIS C+ECGI+QSECWILHNVR+KAS RRLCTNCVL+NN+SRFCPVCFD+YDD+TAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP CSDP F F
Subjt:  QSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAF

Query:  L--HGSESGGVSQSESVEPGLAG--VDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNGDAIAG
            GS   G+ QSE     LAG  + G+SAKA+V AAR+AAQS+RRAAA ARAVAEMKIKNAAFAKKQA LALERLAYL L+EKDG    NSNGDA+AG
Subjt:  L--HGSESGGVSQSESVEPGLAG--VDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNGDAIAG

Query:  E
        E
Subjt:  E

A0A6J1GVZ7 uncharacterized protein LOC1114576611.9e-8177.56Show/hide
Query:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP
        MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CFDIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP
Subjt:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP

Query:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG
         CSDP FAF  G +S G+ QSE     LAG DG+SAKAIV AAR+AAQS+RRAAA ARAVAEMKI+NA FAKKQA LALERLA+LVLQEKD  G+  +NG
Subjt:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG

Query:  DAIAG
        +A AG
Subjt:  DAIAG

A0A6J1I928 uncharacterized protein LOC1114707816.7e-7977.61Show/hide
Query:  QSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAF
        QSNSIS C+ECGI+QSECWILHNVR+KAS RRLCTNC+L+NN+SRFCPVCFD+YDD+TAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP CSDP F F
Subjt:  QSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAF

Query:  L--HGSESGGVSQSESVEPGLAG--VDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNGDAIAG
            GS   G+ QSE     LAG  + G+SAKA+V AAR+AAQS+RRAAA ARAVAEMKIKNAAFAKKQA LALERLAYL L+EKDG  + NSNGDA+AG
Subjt:  L--HGSESGGVSQSESVEPGLAG--VDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNGDAIAG

Query:  E
        E
Subjt:  E

A0A6J1IXP5 uncharacterized protein LOC1114794684.2e-8177.07Show/hide
Query:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP
        MNRPH N+ QSNSIS C ECGISQS CWILHNVR KAS RRLCTNCVLKNNLSRFCP+CFDIYDD+T P SHQRVMCFRCPSISH+SC SFRFSSTFLCP
Subjt:  MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCP

Query:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG
         CSDP FAF  G +SG + QSE     LAG DG+SAKAIV AAR+ AQS+RRAAA ARAVAEMK +NA FAKKQA LALERLAYLVLQEKD  G+  +NG
Subjt:  SCSDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNG

Query:  DAIAG
        +A AG
Subjt:  DAIAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09520.1 LOCATED IN: chloroplast3.2e-2538.8Show/hide
Query:  SNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCF--RCPSISHLSCISFRFSSTFLCPSCSDPR-F
        +NS  +C +CG   S+ W++H VRL+ASLR  CT+C+L+N+ + FCP CF +YD  ++PPS +RV C    C S++H+ C       ++LCP C DP  F
Subjt:  SNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCF--RCPSISHLSCISFRFSSTFLCPSCSDPR-F

Query:  AFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEK
        +F               E G   VD   ++A + AA+IAA S+ +A   A+   + + K AA AKK+A  ALE++  L  +EK
Subjt:  AFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEK

AT3G17460.1 PHD finger family protein1.3e-1533.85Show/hide
Query:  RECGI-SQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFS--------------STFLCPSC
        REC +  + E   +H V    + RRLCT+C+LK     FC VCF+++D+  A P   R++C  CPS +HLSC +   S              S+F C  C
Subjt:  RECGI-SQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFS--------------STFLCPSC

Query:  SDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTG
        S+P F F   S       +E V P    +  +SA A+V A  I+  ++ +A A  +  A  KI  A  AK +A  AL  L  +V+++   TG
Subjt:  SDPRFAFLHGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGGCCGCACATCAACAATCCTCAATCGAATTCCATTTCTCAGTGCCGTGAATGCGGCATCTCTCAATCCGAGTGCTGGATTCTCCACAATGTTCGTCTCAAAGC
GTCTCTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGATTCTGTCCCGTTTGCTTCGATATCTACGACGACACGACGGCGCCGCCGTCCCACCAGC
GAGTTATGTGTTTCCGATGTCCTTCGATCTCTCATCTCTCTTGTATTTCTTTTCGGTTTTCTTCTACCTTCCTGTGCCCTAGCTGCTCCGATCCTCGTTTTGCCTTCTTA
CACGGTTCTGAATCTGGCGGCGTTTCTCAATCGGAGTCCGTTGAGCCTGGTTTGGCCGGCGTTGATGGTGAATCGGCTAAGGCGATTGTCACTGCGGCTCGTATCGCTGC
TCAATCTCTGCGGAGAGCGGCGGCTGGCGCTAGGGCTGTGGCGGAGATGAAGATTAAGAATGCTGCGTTTGCTAAGAAGCAGGCTGCTCTCGCTTTGGAGCGGCTTGCTT
ATCTTGTGCTACAGGAGAAAGATGGCACTGGATTTGTTAATAGCAATGGAGATGCTATTGCTGGTGAACCCTAG
mRNA sequenceShow/hide mRNA sequence
TTTAATTTTAGGTGAAAATCAACACAAACACAAAAAAAACGTTCAATTCTGAAAGAGTTCAAAATTCGAACCAAAATTCTTGAAGCCAAAGAGCCAAATCGAGACTTCTT
CTTCTTCATCATCCCAACTCTCTCTTTTCAAGTTTCCAGCTCCGATTCCGGGGAACTATTCCGGCGAACTAGGGTTTCTATTCCGGTGACCTAGGGTTTCTGTTCCGGCG
AATGCTGTTGCTCCTTCTACTCCGATGAATCGGCCGCACATCAACAATCCTCAATCGAATTCCATTTCTCAGTGCCGTGAATGCGGCATCTCTCAATCCGAGTGCTGGAT
TCTCCACAATGTTCGTCTCAAAGCGTCTCTCCGTCGTCTCTGCACCAATTGCGTCCTCAAGAACAACCTCTCCCGATTCTGTCCCGTTTGCTTCGATATCTACGACGACA
CGACGGCGCCGCCGTCCCACCAGCGAGTTATGTGTTTCCGATGTCCTTCGATCTCTCATCTCTCTTGTATTTCTTTTCGGTTTTCTTCTACCTTCCTGTGCCCTAGCTGC
TCCGATCCTCGTTTTGCCTTCTTACACGGTTCTGAATCTGGCGGCGTTTCTCAATCGGAGTCCGTTGAGCCTGGTTTGGCCGGCGTTGATGGTGAATCGGCTAAGGCGAT
TGTCACTGCGGCTCGTATCGCTGCTCAATCTCTGCGGAGAGCGGCGGCTGGCGCTAGGGCTGTGGCGGAGATGAAGATTAAGAATGCTGCGTTTGCTAAGAAGCAGGCTG
CTCTCGCTTTGGAGCGGCTTGCTTATCTTGTGCTACAGGAGAAAGATGGCACTGGATTTGTTAATAGCAATGGAGATGCTATTGCTGGTGAACCCTAGCTGCAGGACAAG
GGAGGTAACAACTTCGATTCTGTAGCCGTAGATGTAGATTAAGCAATTGAGAGTAGGATTTTGAAACTGTCTTGTTCAATCGAATGCAGAGCGTAGAGGTACGATTAACC
ATCCATGGAAACTTCTGGATCCATGTTTGTGATGATTTCTCTGTGTTCATGGATGCTAGGAAAGATCAGTAGAGGGAAGTGTGTAAGGATTTTCATGTATGTTTCAACAT
TGTTTGTTTGTTCCTTTGGGGGATTTTCTTCATATTGTAATGCTATTGAGTATGAGGCAACTCTTTTTCTGCTTCTCTATTGATTCCAATTCTTTATTTTGCCATTTTTG
TTTCTGTTTTGACTTTCTGGAGTTATTCTTCTTCATCCTGCTCTCATCTTTTGATAATTTTA
Protein sequenceShow/hide protein sequence
MNRPHINNPQSNSISQCRECGISQSECWILHNVRLKASLRRLCTNCVLKNNLSRFCPVCFDIYDDTTAPPSHQRVMCFRCPSISHLSCISFRFSSTFLCPSCSDPRFAFL
HGSESGGVSQSESVEPGLAGVDGESAKAIVTAARIAAQSLRRAAAGARAVAEMKIKNAAFAKKQAALALERLAYLVLQEKDGTGFVNSNGDAIAGEP