; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010175 (gene) of Chayote v1 genome

Gene IDSed0010175
OrganismSechium edule (Chayote v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationLG13:2821878..2824386
RNA-Seq ExpressionSed0010175
SyntenySed0010175
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2602750.1 cysteine-rich and transmembrane domain-containing protein A [Pyrus ussuriensis x Pyrus communis]2.4e-3283.33Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPPGYP QGYPPP  YP   PP YAPQY QPPPQQQ SS+ GC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

XP_008454408.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]3.7e-3385.71Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY QPPP QQQSS  GCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

XP_009375656.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x bretschneideri]6.3e-3384.44Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPPGYP QGYPPP  YP   PP YAPQY QPPPQQQQSS+ GC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

XP_011652909.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]1.5e-3485.71Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY QPPPQQQ SS  GCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

XP_038905303.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]1.3e-3384.62Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY Q PPQQQ SS  GCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0KWC5 Uncharacterized protein7.2e-3585.71Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY QPPPQQQ SS  GCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

A0A0K9RZ05 CYSTM domain-containing protein3.3e-3279.38Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPP-----GYPQQGYPPPG-----AYPPPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPP     GYPQQGYPPPG      YPP QYAPQY QPPPQQQ  S+VGC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPP-----GYPQQGYPPPG-----AYPPPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

A0A1S3BZB4 cysteine-rich and transmembrane domain-containing protein A-like1.8e-3385.71Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQGQPP+G PPPQGYPPEGYPK+AYPPPGYP QGYPPPGAYP    PP YAPQY QPPP QQQSS  GCLEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP----PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

A0A540N4A8 Uncharacterized protein2.6e-3283.33Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPPGY  QGYPPP  YP   PP YAPQY QPPPQQQQSS+ GC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

A0A5N5FN73 Cysteine-rich and transmembrane domain-containing protein A1.2e-3283.33Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MSYYNQ QPPVG PPPQGYPPEGYPK+AYPPPGYP QGYPPP  YP   PP YAPQY QPPPQQQ SS+ GC+EGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYP---PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

SwissProt top hitse value%identityAlignment
A5PLE2 Cysteine-rich and transmembrane domain-containing protein 14.7e-0746.53Show/hide
Query:  YYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYP--PPGAYPPPQYAPQ-----YQQPPP------------QQQQSSNVGCLEGCLAALCCCCLL
        Y  QG P  G  P QGYP +GYP + YP  GYP QGYP  PPG  PP  Y  Q     Y QP P            +  QS    CL  C AALCCCCL 
Subjt:  YYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYP--PPGAYPPPQYAPQ-----YQQPPP------------QQQQSSNVGCLEGCLAALCCCCLL

Query:  D
        D
Subjt:  D

Q6BH13 Metacaspase-16.1e-0758.57Show/hide
Query:  YNQGQPPVGA----PPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYPPPQYAPQ-YQQPPPQQQQSSNVG
        Y  G PP GA    PPPQGYPP+GYP + YPP GY  QGYPP G Y P  YAPQ YQQ   QQQ     G
Subjt:  YNQGQPPVGA----PPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYPPPQYAPQ-YQQPPPQQQQSSNVG

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B6.1e-1558Show/hide
Query:  NQGQPPVGAPPPQGYPPEGYPKEAYPPPG--YPQQGYPPPGAYP----PPQ-YAPQ------YQQ----PPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        +Q  P VG PP   YP EG PK+AYPPPG  YPQQGYPPP  YP    PPQ Y PQ      Y Q    P  QQQQ  + G LEGC+AALCC C+LDACF
Subjt:  NQGQPPVGAPPPQGYPPEGYPKEAYPPPG--YPQQGYPPPGAYP----PPQ-YAPQ------YQQ----PPPQQQQSSNVGCLEGCLAALCCCCLLDACF

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH24.5e-2669Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYP----PPGAYP---------PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MS YN  QPPVG PPPQGYPPEGYPK+AYPP GYP QGYP    PP  YP         PP YAPQY  PP  QQQ S+ G LEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYP----PPGAYP---------PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH14.5e-1865.91Show/hide
Query:  YNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPG---AYPPPQY-APQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        Y+Q Q PVGAPPPQGYP    PK+ YPP GYP  GYPPPG    YP   Y  PQY Q P   QQ  N G LEGCLAALCCCCLLDACF
Subjt:  YNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPG---AYPPPQY-APQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

Arabidopsis top hitse value%identityAlignment
AT1G12810.1 proline-rich family protein1.7e-0740.98Show/hide
Query:  PPVGAPPP---QGYPPEGYPKEAYPPPGYP-----QQGYPPP---GAYPPPQ----------------YAPQYQQPPP--------------QQQQSSNV
        PP   PPP     YPP GYP  A PPPGYP      +GYPPP   G YPPP                 Y  Q+  PPP                 Q S+ 
Subjt:  PPVGAPPP---QGYPPEGYPKEAYPPPGYP-----QQGYPPP---GAYPPPQ----------------YAPQYQQPPP--------------QQQQSSNV

Query:  GC---LEGCLAALCCCCLLDAC
        GC   + GCLAALCCCCLL+ C
Subjt:  GC---LEGCLAALCCCCLLDAC

AT2G41420.1 proline-rich family protein3.2e-2769Show/hide
Query:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYP----PPGAYP---------PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        MS YN  QPPVG PPPQGYPPEGYPK+AYPP GYP QGYP    PP  YP         PP YAPQY  PP  QQQ S+ G LEGCLAALCCCCLLDACF
Subjt:  MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYP----PPGAYP---------PPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF

AT3G49845.1 unknown protein2.6e-1346.72Show/hide
Query:  YNQGQPPVGAPPPQGYPP-EGYPKEAYPPP-----------GYPQQGYPPP----------GAYPPPQY----APQ--YQQPPP----------QQQQSS
        Y   Q PV APPPQGYPP EGYP   YPPP           GYP  GYPPP            YPPPQY     PQ  YQ PPP          ++ +  
Subjt:  YNQGQPPVGAPPPQGYPP-EGYPKEAYPPP-----------GYPQQGYPPP----------GAYPPPQY----APQ--YQQPPP----------QQQQSS

Query:  NVGCLEGCLAALCCCCLLDACF
        + G +EGCLA LCCC LL+ACF
Subjt:  NVGCLEGCLAALCCCCLLDACF

AT5G45350.1 proline-rich family protein1.2e-0554.1Show/hide
Query:  GQPPVGAPPPQGYPPEGYPKEAYPPP--GYPQQGYPP------PGAYPPPQYAPQYQQPPP
        G PP G PPP  YPP GYP++ YPPP   YP  GYPP      PG YPP   AP Y   PP
Subjt:  GQPPVGAPPPQGYPPEGYPKEAYPPP--GYPQQGYPP------PGAYPPPQYAPQYQQPPP

AT5G67600.1 unknown protein3.2e-1965.91Show/hide
Query:  YNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPG---AYPPPQY-APQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF
        Y+Q Q PVGAPPPQGYP    PK+ YPP GYP  GYPPPG    YP   Y  PQY Q P   QQ  N G LEGCLAALCCCCLLDACF
Subjt:  YNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPG---AYPPPQY-APQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTATAATCAAGGTCAGCCGCCGGTCGGAGCGCCGCCGCCGCAAGGTTATCCGCCGGAAGGATATCCGAAGGAAGCTTATCCGCCGCCGGGATATCCGCAACA
AGGATATCCACCTCCCGGAGCTTATCCGCCGCCGCAGTACGCTCCTCAGTACCAGCAACCTCCTCCGCAACAACAACAGAGTAGCAACGTCGGTTGTTTGGAAGGCTGTT
TGGCTGCGCTGTGCTGTTGCTGCTTGCTTGACGCCTGTTTCTAA
mRNA sequenceShow/hide mRNA sequence
TTCAACCTCTGATGTCACGACGTGTCAAAATCAAAACCGCAGACGTAAACTCCCAAACCTAATTAAAAAAAAAGATTAAGTGGAATTACAATTACTAAACTGATTAGAGA
GATAAAGCCTTCCCGGATTAGCAGCAAAAACAAAATCACAACCTTTTTCCGATATATATATATATATAAATCCTTCATATCCCATTTTCTTCTCCATTGACTCTTTTCTC
CTCTGTTTTTTTCTTTATTTGTTTCTCTGTTTTTTCAAATTCCGGCAGATCTCGCCGTTGATCGGTTTTGTTGTGTCGGATTTGGTTGATTTCGAGAGGGAGAAGAGATG
AGTTATTATAATCAAGGTCAGCCGCCGGTCGGAGCGCCGCCGCCGCAAGGTTATCCGCCGGAAGGATATCCGAAGGAAGCTTATCCGCCGCCGGGATATCCGCAACAAGG
ATATCCACCTCCCGGAGCTTATCCGCCGCCGCAGTACGCTCCTCAGTACCAGCAACCTCCTCCGCAACAACAACAGAGTAGCAACGTCGGTTGTTTGGAAGGCTGTTTGG
CTGCGCTGTGCTGTTGCTGCTTGCTTGACGCCTGTTTCTAAAGAGTATTCATTTGCAATTGGGCTGAGCTTCAATTTCGGATCTCTCGTACAACTTTTCGCTTTTTTTTT
TTTTAAAAAACTCATTGTGAAATTTTAATTTCTTGCATTTTCTTTATAATTTTATAGGCTTAGTGCTTGTACTTGGTTTCTTCTTCTTTCTCTCTACATTTTTCTTATTA
TAATAACATAATCTTATGTCTTCACTCTCTTTCTCTCTTCTTTTATTTGTATTTTTTTAGTTTTAATTGGACAAGATTCAAAATTTGAATTTT
Protein sequenceShow/hide protein sequence
MSYYNQGQPPVGAPPPQGYPPEGYPKEAYPPPGYPQQGYPPPGAYPPPQYAPQYQQPPPQQQQSSNVGCLEGCLAALCCCCLLDACF