; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010179 (gene) of Chayote v1 genome

Gene IDSed0010179
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG04:46283393..46287104
RNA-Seq ExpressionSed0010179
SyntenySed0010179
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011839.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-14880.23Show/hide
Query:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED
        MG+LQ+QLQSRLRVSKILSSTIR WE   PLLH+P RTPD SLSPV+SR FSSNSMDDD NFS S PR+SPP+RRSPPD R+ARR PKF G+ SAPYPED
Subjt:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED

Query:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA
        NRN+RFNRHSEGSS R  NE P+SR R+ESLSQKDFSFL+KFKLNTD Q  S EK E SSS  +FSE +    SQPQ PPEADEIF++MKETGLIPNAVA
Subjt:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA

Query:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL
        MLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEK DEAIRIFRKMQNNGISPNAFSYG+LIQGL +SK++EDAV+FC EMLESGHSPNL
Subjt:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL

Query:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE
        TTFVGLIDELCKEKG++E  +V+ETLKQKGFLI EK L++FLNKRAPFSP +WE
Subjt:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE

XP_022952706.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]1.0e-14880.51Show/hide
Query:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED
        MG+LQ+QLQSRLRVSKILSSTIR WE   PLLH+P RTPD SLSPV+SR FSSNSMDDD NFS S PR+SPP+RRSPPD R+ARR PKF G+ SAPYPED
Subjt:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED

Query:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA
        NRN+RFNRHSEGSS R  N+ P+SR R+ESLSQKDFSFL+KFKLNTD Q  S EK E SSS  + SE +    SQPQ PPEADEIF++MKETGLIPNAVA
Subjt:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA

Query:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL
        MLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYG+LIQGL +SK++EDAV+FCIEMLESGHSPNL
Subjt:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL

Query:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE
        TTFVGLIDELCKEKG++E  +V+ETLKQKGFLI EK L+DFLNKRAPFSP +WE
Subjt:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE

XP_022969144.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]3.9e-14880.51Show/hide
Query:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED
        MG+LQ+QLQSRLRVSKIL STIR WE   PLLH+P RTPD SLSPV+SR FSSNSMDDD NFS S PR+SPP+RRSPPD R+ARR PKF G+ SAPYPED
Subjt:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED

Query:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTD--IQSEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA
        NRN+RFNRH EGS  R  NE P+SR+RSESLSQKDFSFL+KFKLNTD    S EKTE SSS  +FSE +    SQPQ PPEADEIF++MKETGLIPNAVA
Subjt:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTD--IQSEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA

Query:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL
        MLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE LDEAIRIFRKMQNNGISPNAFSYGVLIQGL + KK+EDAV+FCIEMLESGHSPNL
Subjt:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL

Query:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE
        TTFVGLIDELCKEKG++E  +V+ETLKQKGFLI EKAL++FLNKRAPFSP +WE
Subjt:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE

XP_023554525.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo]7.0e-15081.07Show/hide
Query:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED
        MG+LQ+QLQSRLRVSKILSSTIR WE   PLLH+P RTPD SLSPV+SR FSSNSMDDD NFS S PR+SPP+RRSPPD R+ARR PKF G+ SAPYPED
Subjt:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED

Query:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA
        NRN+RFNRHSEGSS R  NE P+SR+R+ESLSQKDFSFL+KFKLNTD Q  S EK E SSS  +FSE +    SQPQ PPEADEIF++MKETGLIPNAVA
Subjt:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA

Query:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL
        MLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYG+LIQGL +SK++EDAV+FCIEMLESGHSPNL
Subjt:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL

Query:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE
        TTFVGLIDELCKEKG +E  +V+ETLKQKGFLI EKAL++FLNKRAPFSP +WE
Subjt:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE

XP_038888880.1 pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hispida]8.6e-14077.49Show/hide
Query:  LQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRS-PPDHRDARRPPKFNGDASAPYPEDNR
        +  Q QSRLRV KILSSTIR+WE + PLLH+  R P+FSLSP +SR F+SNS+DDD  FS S PRTSPP+RRS PPDHR+ARR P FN + SAP+P+DNR
Subjt:  LQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRS-PPDHRDARRPPKFNGDASAPYPEDNR

Query:  NRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSE--EKTEQSSSP--PEFSEEIPSQPQRPPEADEIFKRMKETGLIPNAVAMLD
        N+RFNR SEGSS R  NE  ISRQR+ESL+QKDFSFL++FKLNTD QS   EKTE+SSS    E  +E  SQPQRPPEADEIF++MKETGLIPNAVAMLD
Subjt:  NRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSE--EKTEQSSSP--PEFSEEIPSQPQRPPEADEIFKRMKETGLIPNAVAMLD

Query:  GLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLTTF
        GLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGI PNAFS+GVLIQGL + KK+EDAVAFCIEMLESGHSPNL TF
Subjt:  GLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLTTF

Query:  VGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE
        VGLIDELC EKG++E  SVVETLKQKGFLI EKAL++ LNKRAPFSP +WE
Subjt:  VGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE

TrEMBL top hitse value%identityAlignment
A0A1S3CFW0 pentatricopeptide repeat-containing protein At4g381501.8e-13576.22Show/hide
Query:  QLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPEDNRNRRF
        Q QSRL+VSKILSS+IR+WEI+ PLLHNP RTPDFSLSP  SRRFSSNSMDDDR FS S PR +PP+RR PPDHR+ARR P+  G  +  Y  DNRN+RF
Subjt:  QLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPEDNRNRRF

Query:  NRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQS--EEKTEQSSSPPEFSEEI----PSQPQRPPEADEIFKRMKETGLIPNAVAMLDGL
        NRHSEGSS R  NE   SRQRSESLSQKDFSFL+KFKLNTD QS   EKTE++SS    SE +     SQ QRPP ADEIF++MKE+GLIPNAVAMLDGL
Subjt:  NRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQS--EEKTEQSSSPPEFSEEI----PSQPQRPPEADEIFKRMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQN GISPNAFS+GVLIQGL + KK++DAVAFC EMLESGH PNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLTTFVG

Query:  LIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE
        LID LC EKG++E  +VVET KQKGFLI+EKAL++FLNKRAPFSP +W+
Subjt:  LIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE

A0A5D3D5J5 Pentatricopeptide repeat-containing protein1.8e-13576.22Show/hide
Query:  QLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPEDNRNRRF
        Q QSRL+VSKILSS+IR+WEI+ PLLHNP RTPDFSLSP  SRRFSSNSMDDDR FS S PR +PP+RR PPDHR+ARR P+  G  +  Y  DNRN+RF
Subjt:  QLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPEDNRNRRF

Query:  NRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQS--EEKTEQSSSPPEFSEEI----PSQPQRPPEADEIFKRMKETGLIPNAVAMLDGL
        NRHSEGSS R  NE   SRQRSESLSQKDFSFL+KFKLNTD QS   EKTE++SS    SE +     SQ QRPP ADEIF++MKE+GLIPNAVAMLDGL
Subjt:  NRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQS--EEKTEQSSSPPEFSEEI----PSQPQRPPEADEIFKRMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQN GISPNAFS+GVLIQGL + KK++DAVAFC EMLESGH PNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLTTFVG

Query:  LIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE
        LID LC EKG++E  +VVET KQKGFLI+EKAL++FLNKRAPFSP +W+
Subjt:  LIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE

A0A6J1C2J3 pentatricopeptide repeat-containing protein At4g381506.0e-13976.12Show/hide
Query:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED
        M +LQLQLQSRLR+SKI+SS+I + E + PLLH+  RT DFSL P +SR FSSNSMDDD   SNS PR++PP RRSPPD R+ RR PKF+   SA YP D
Subjt:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED

Query:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA
        +RNRR N+ SEGSSFR  NE  ISRQRSE LSQKDFSFL+KFKLNTD Q  S+EKTEQSS+ P FSE +    SQPQRPPEADEIFK+MKETGLIPNAVA
Subjt:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA

Query:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL
        MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQ NGISPNAFS+GVLIQGL +  K+E+A+ FCIEMLESGHSPN+
Subjt:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL

Query:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWEDI
        TT VGL+DELCKE+G EE +SV+ETLKQKGFL+ EKAL++FLNKRAPFSP++WE I
Subjt:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWEDI

A0A6J1GKZ0 pentatricopeptide repeat-containing protein At4g38150-like4.9e-14980.51Show/hide
Query:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED
        MG+LQ+QLQSRLRVSKILSSTIR WE   PLLH+P RTPD SLSPV+SR FSSNSMDDD NFS S PR+SPP+RRSPPD R+ARR PKF G+ SAPYPED
Subjt:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED

Query:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA
        NRN+RFNRHSEGSS R  N+ P+SR R+ESLSQKDFSFL+KFKLNTD Q  S EK E SSS  + SE +    SQPQ PPEADEIF++MKETGLIPNAVA
Subjt:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQ--SEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA

Query:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL
        MLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYG+LIQGL +SK++EDAV+FCIEMLESGHSPNL
Subjt:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL

Query:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE
        TTFVGLIDELCKEKG++E  +V+ETLKQKGFLI EK L+DFLNKRAPFSP +WE
Subjt:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE

A0A6J1I1Q2 pentatricopeptide repeat-containing protein At4g38150-like1.9e-14880.51Show/hide
Query:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED
        MG+LQ+QLQSRLRVSKIL STIR WE   PLLH+P RTPD SLSPV+SR FSSNSMDDD NFS S PR+SPP+RRSPPD R+ARR PKF G+ SAPYPED
Subjt:  MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPED

Query:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTD--IQSEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA
        NRN+RFNRH EGS  R  NE P+SR+RSESLSQKDFSFL+KFKLNTD    S EKTE SSS  +FSE +    SQPQ PPEADEIF++MKETGLIPNAVA
Subjt:  NRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTD--IQSEEKTEQSSSPPEFSEEI---PSQPQRPPEADEIFKRMKETGLIPNAVA

Query:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL
        MLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE LDEAIRIFRKMQNNGISPNAFSYGVLIQGL + KK+EDAV+FCIEMLESGHSPNL
Subjt:  MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNL

Query:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE
        TTFVGLIDELCKEKG++E  +V+ETLKQKGFLI EKAL++FLNKRAPFSP +WE
Subjt:  TTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWE

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial2.6e-2233.99Show/hide
Query:  EADEIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCR
        EA+E F  M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+   + EA ++F +M   G+ P++ ++  LI G C+
Subjt:  EADEIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCR

Query:  SKKMEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKG
        +  M+DA      M+++G SPN+ T+  LID LCKE  ++    ++  + + G
Subjt:  SKKMEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKG

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial1.2e-2230.46Show/hide
Query:  EADEIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCR
        EA E++  M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ +++ +CKA+++D+ +R+FR++ + G+ PN  +Y  L+ G C+
Subjt:  EADEIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCR

Query:  SKKMEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQ
        S K+  A     EM+  G  P++ T+  L+D LC    + +   + E +++
Subjt:  SKKMEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQ

Q9FNL2 Pentatricopeptide repeat-containing protein At5g461001.5e-2235.33Show/hide
Query:  EIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKK
        +IF  M + G  P++     ++ GLC+ G I EA KLF  + EK   P VV YT++++G C ++ +DEA+R   +M++ GI PN F+Y  L+ GLC+  +
Subjt:  EIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKK

Query:  MEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKG
           A+     M+  G  PN+ T+  LI  LCKE+ ++E   +++ +  +G
Subjt:  MEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKG

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381505.5e-7357.25Show/hide
Query:  PEDNRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSEEKTEQSSSPPEFSEEIPSQPQRPPE-ADEIFKRMKETGLIPNAVAM
        PE   NR        +S R    R          +  D  FL++FKL  +  S E  +         E+ P +P  PPE +DEIFK+MKE GLIPNAVAM
Subjt:  PEDNRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSEEKTEQSSSPPEFSEEIPSQPQRPPE-ADEIFKRMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLT
        LDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFRKMQNNGI+PNAFSYGVL+QGL     ++DAVAFC EMLESGHSPN+ 
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWEDI
        TFV L+D LC+ KG+E+ QS ++TL QKGF +  KA+K+F++KRAPF    WE I
Subjt:  TFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWEDI

Q9T0D6 Pentatricopeptide repeat-containing protein At4g116901.2e-2229.02Show/hide
Query:  EIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKK
        E++++M+E G+ PN      +++ LCKDG  ++A ++F  +RE+G    +V Y  ++ G C+  KL+EA ++  +M+++GI+PN  +Y  LI G C   K
Subjt:  EIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKK

Query:  MEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKG---------FLIEEKALKDFLNKRAPFSPSLWEDIQLPSVHAH
        +  A++ C ++   G SP+L T+  L+   C++        +V+ ++++G          LI+  A  D + K      S+ E   +P VH +
Subjt:  MEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKG---------FLIEEKALKDFLNKRAPFSPSLWEDIQLPSVHAH

Arabidopsis top hitse value%identityAlignment
AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein8.3e-2430.46Show/hide
Query:  EADEIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCR
        EA E++  M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ +++ +CKA+++D+ +R+FR++ + G+ PN  +Y  L+ G C+
Subjt:  EADEIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCR

Query:  SKKMEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQ
        S K+  A     EM+  G  P++ T+  L+D LC    + +   + E +++
Subjt:  SKKMEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQ

AT4G11690.1 Pentatricopeptide repeat (PPR-like) superfamily protein8.3e-2429.02Show/hide
Query:  EIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKK
        E++++M+E G+ PN      +++ LCKDG  ++A ++F  +RE+G    +V Y  ++ G C+  KL+EA ++  +M+++GI+PN  +Y  LI G C   K
Subjt:  EIFKRMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKK

Query:  MEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKG---------FLIEEKALKDFLNKRAPFSPSLWEDIQLPSVHAH
        +  A++ C ++   G SP+L T+  L+   C++        +V+ ++++G          LI+  A  D + K      S+ E   +P VH +
Subjt:  MEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKG---------FLIEEKALKDFLNKRAPFSPSLWEDIQLPSVHAH

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein3.9e-7457.25Show/hide
Query:  PEDNRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSEEKTEQSSSPPEFSEEIPSQPQRPPE-ADEIFKRMKETGLIPNAVAM
        PE   NR        +S R    R          +  D  FL++FKL  +  S E  +         E+ P +P  PPE +DEIFK+MKE GLIPNAVAM
Subjt:  PEDNRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSEEKTEQSSSPPEFSEEIPSQPQRPPE-ADEIFKRMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLT
        LDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFRKMQNNGI+PNAFSYGVL+QGL     ++DAVAFC EMLESGHSPN+ 
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWEDI
        TFV L+D LC+ KG+E+ QS ++TL QKGF +  KA+K+F++KRAPF    WE I
Subjt:  TFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWEDI

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein3.9e-7457.25Show/hide
Query:  PEDNRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSEEKTEQSSSPPEFSEEIPSQPQRPPE-ADEIFKRMKETGLIPNAVAM
        PE   NR        +S R    R          +  D  FL++FKL  +  S E  +         E+ P +P  PPE +DEIFK+MKE GLIPNAVAM
Subjt:  PEDNRNRRFNRHSEGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSEEKTEQSSSPPEFSEEIPSQPQRPPE-ADEIFKRMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLT
        LDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFRKMQNNGI+PNAFSYGVL+QGL     ++DAVAFC EMLESGHSPN+ 
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWEDI
        TFV L+D LC+ KG+E+ QS ++TL QKGF +  KA+K+F++KRAPF    WE I
Subjt:  TFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFLNKRAPFSPSLWEDI

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-2831.3Show/hide
Query:  DARRPPKFNGDASAPYPEDNRNRRFNRHSEGSSFR--SGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSEEKTEQSSSPP--EFSEE-IPSQPQRPPE
        D + PP+  G       + N N  F     G   R  S   + ++ + + SLS  D       +  T +  + K ++   PP   FS++    +P+ P  
Subjt:  DARRPPKFNGDASAPYPEDNRNRRFNRHSEGSSFR--SGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSEEKTEQSSSPP--EFSEE-IPSQPQRPPE

Query:  ADEIFKRMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCR-SKK
          EIF +M+  G    AV M D L KDG   EA++LF  I++K  +P+VV +TA+V+ +  A +  E +++F +M  +G+SPNA++Y VLI+GL    K 
Subjt:  ADEIFKRMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCR-SKK

Query:  MEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFL
         +DA  + +EM+ +G SPN  T+  + +   +E   E  + +++ +K KGF+ +EKA+++ L
Subjt:  MEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEEKALKDFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCATTGCAGCTGCAACTTCAATCTCGCCTTCGAGTTTCGAAGATTTTGTCCTCAACAATCCGGCAATGGGAAATAGAGTCTCCTTTACTTCACAATCCATCGCG
AACGCCGGATTTCTCACTCTCGCCGGTGAAATCTCGCCGTTTTAGCTCCAATTCCATGGATGACGATCGGAACTTCTCAAACTCCGGGCCGAGAACCAGCCCGCCGCGCC
GCCGTTCTCCTCCTGATCACCGCGATGCTCGTCGACCTCCCAAATTCAACGGGGATGCATCTGCTCCTTACCCTGAGGATAATCGGAATCGGCGCTTTAACAGACATTCG
GAAGGCTCTTCATTTCGATCCGGTAATGAAAGGCCGATTTCGCGGCAAAGGAGTGAGTCCTTGTCTCAGAAGGATTTTAGCTTTCTGGATAAATTTAAGCTGAATACTGA
TATTCAAAGTGAAGAGAAGACTGAGCAGAGCTCTTCTCCTCCGGAATTTTCGGAGGAGATACCGTCACAACCGCAGCGGCCTCCAGAAGCTGATGAGATCTTCAAGAGAA
TGAAGGAGACGGGTCTAATTCCCAATGCTGTCGCCATGCTCGATGGGCTGTGTAAAGATGGGCTAATTCAAGAAGCTATGAAACTCTTTGGTTTGATTCGTGAGAAGGGT
ACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCTGAGAAGCTTGATGAAGCAATTAGGATCTTCAGGAAAATGCAGAATAATGGCATTTC
TCCTAATGCTTTCAGTTATGGCGTCTTGATACAGGGACTGTGCAGAAGCAAAAAAATGGAGGATGCTGTAGCATTTTGCATTGAAATGTTGGAATCTGGTCATTCTCCAA
ATCTGACCACTTTTGTTGGCTTAATTGATGAGTTGTGCAAAGAAAAGGGAATGGAGGAAACTCAGAGTGTTGTAGAAACCTTAAAACAAAAGGGGTTCTTGATTGAAGAG
AAAGCCTTAAAGGATTTTTTGAATAAAAGAGCCCCGTTTTCTCCAAGTCTATGGGAAGATATCCAGCTCCCTAGTGTTCATGCTCATCTGTTTGATTATGTAGGTGAAGA
AACCAATCATATCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATCATTGCAGCTGCAACTTCAATCTCGCCTTCGAGTTTCGAAGATTTTGTCCTCAACAATCCGGCAATGGGAAATAGAGTCTCCTTTACTTCACAATCCATCGCG
AACGCCGGATTTCTCACTCTCGCCGGTGAAATCTCGCCGTTTTAGCTCCAATTCCATGGATGACGATCGGAACTTCTCAAACTCCGGGCCGAGAACCAGCCCGCCGCGCC
GCCGTTCTCCTCCTGATCACCGCGATGCTCGTCGACCTCCCAAATTCAACGGGGATGCATCTGCTCCTTACCCTGAGGATAATCGGAATCGGCGCTTTAACAGACATTCG
GAAGGCTCTTCATTTCGATCCGGTAATGAAAGGCCGATTTCGCGGCAAAGGAGTGAGTCCTTGTCTCAGAAGGATTTTAGCTTTCTGGATAAATTTAAGCTGAATACTGA
TATTCAAAGTGAAGAGAAGACTGAGCAGAGCTCTTCTCCTCCGGAATTTTCGGAGGAGATACCGTCACAACCGCAGCGGCCTCCAGAAGCTGATGAGATCTTCAAGAGAA
TGAAGGAGACGGGTCTAATTCCCAATGCTGTCGCCATGCTCGATGGGCTGTGTAAAGATGGGCTAATTCAAGAAGCTATGAAACTCTTTGGTTTGATTCGTGAGAAGGGT
ACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCTGAGAAGCTTGATGAAGCAATTAGGATCTTCAGGAAAATGCAGAATAATGGCATTTC
TCCTAATGCTTTCAGTTATGGCGTCTTGATACAGGGACTGTGCAGAAGCAAAAAAATGGAGGATGCTGTAGCATTTTGCATTGAAATGTTGGAATCTGGTCATTCTCCAA
ATCTGACCACTTTTGTTGGCTTAATTGATGAGTTGTGCAAAGAAAAGGGAATGGAGGAAACTCAGAGTGTTGTAGAAACCTTAAAACAAAAGGGGTTCTTGATTGAAGAG
AAAGCCTTAAAGGATTTTTTGAATAAAAGAGCCCCGTTTTCTCCAAGTCTATGGGAAGATATCCAGCTCCCTAGTGTTCATGCTCATCTGTTTGATTATGTAGGTGAAGA
AACCAATCATATCACTTAG
Protein sequenceShow/hide protein sequence
MGSLQLQLQSRLRVSKILSSTIRQWEIESPLLHNPSRTPDFSLSPVKSRRFSSNSMDDDRNFSNSGPRTSPPRRRSPPDHRDARRPPKFNGDASAPYPEDNRNRRFNRHS
EGSSFRSGNERPISRQRSESLSQKDFSFLDKFKLNTDIQSEEKTEQSSSPPEFSEEIPSQPQRPPEADEIFKRMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKG
TIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGVLIQGLCRSKKMEDAVAFCIEMLESGHSPNLTTFVGLIDELCKEKGMEETQSVVETLKQKGFLIEE
KALKDFLNKRAPFSPSLWEDIQLPSVHAHLFDYVGEETNHIT