CuGenDBv2

Gene ID	Sed0010184
Organism	Sechium edule (Chayote v1)
Description	FAS1 domain-containing protein
Genome location	LG03:2391430..2393219
RNA-Seq Expression	Sed0010184
Synteny	Sed0010184
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR000782 - FAS1 domain IPR036378 - FAS1 domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7016003.1 hypothetical protein SDJN02_21107 [Cucurbita argyrosperma subsp. argyrosperma]

4.5e-79

86.22

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT
        MKRSFILKNPIA VFM+LSLCC+LIVLITTLRLP+LTVG KAV S Q S+I KVPK + LGKFGEMMIKMLPKDLAFTVF+PSEKAF+RELSLRVNESLT
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT

Query:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSE
        TEK DDTYA ISRILGFSAVPRTIYST VDY  EISYDAVSGFTL ISK+ DG LIVNRVRSE VDIKKKDVLVHIMDGVIMDA FEQSVK DDSE
Subjt:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSE

XP_022133527.1 uncharacterized protein LOC111006089 [Momordica charantia]

2.1e-76

82.14

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAVSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLTT
        MK+SFI+KNPIA  FM+LS+CCILIVLI+TLRLP+LTVGV AV+       KVPK + LGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSL+VNES TT
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAVSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLTT

Query:  EKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED
        EK DDTYA ISR+LGFSAVPR IYS+ VDY KEISYDAVSGFTLYISK+ DG LIVNRVRSEMVDIKKKD++VHIMDGVIMDAEFEQSVK DDSED
Subjt:  EKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

XP_022939922.1 uncharacterized protein LOC111445644 [Cucurbita moschata]

4.0e-80

86.8

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT
        MKRSFILKNPIA VFM+LSLCCILIVLITTLRLP+LTVG KAV S Q S+I KVPK + LGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSL+VNESLT
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT

Query:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED
        TEK DDTY  ISRILGFSAVPRTIYSTSVDY  EISYDAVSGFTL ISK+ DG LIVNRVRSE VDIKKKDVLVHIMDGVIMDA FEQSVK DDSED
Subjt:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

XP_022993525.1 uncharacterized protein LOC111489506 [Cucurbita maxima]

2.0e-79

85.79

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT
        MKRSFILKNPIA VFM+LSLCCILIVLITTLRLP+LTVG KAV S Q S+I K+PK + LGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSLRVNESLT
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT

Query:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED
        TEK DDTYA ISRILGFSAVPRTIYSTSVDY  EISYDAVSGFTL ISK+ DG LIVNRVRSE VD+KKKDVLVH+MDGVIMDA FEQSVK D SED
Subjt:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

XP_023549508.1 uncharacterized protein LOC111807988 [Cucurbita pepo subsp. pepo]

2.8e-81

87.31

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT
        MKRSFILKNPIA VFM+LSLCCILIVLITTLRLP+LTVG KAV S Q S+I KVPK + LGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSLRVNESLT
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT

Query:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED
        TEK DDTYA ISRILGFSAVPRT+YSTSVDY  EISYDAVSGFTL ISK+ DG LIVNRVRSEMVD+KKKDVLVHIMDGVIMDA FEQSVK DDSED
Subjt:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8H5 FAS1 domain-containing protein

2.1e-74

80.81

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKA-VSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT
        MKRSFILKNPIA VFM+LSLCC+LIVLITTLRLP+LTVGVKA    + S+I KV K + LGKFGEMMI+MLP+DLAFTVF+PSEKAFERELSLRVNES T
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKA-VSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT

Query:  -TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED
         TEK DDTYA ISRILGFSAVPRTIYST VDY  EI YDAVSGFTL ISK+ +G+L+VN VRSEMVD+KKKDVLVHIMDGVIMDA FEQSVK DD+ED
Subjt:  -TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

A0A1S3B3H1 uncharacterized protein LOC103485559

1.4e-73

80.3

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVK-AVSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT
        MKRSFILKNPIA VFM+LSLCC+LIVLITTLRLP+LTVG K     + S+I KV K   LGKFGEMMI+MLP+DLAFTVF+PSEKAFERELSLRVNES T
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVK-AVSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT

Query:  -TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED
         TEK DDTYA ISRILGFSAVPRTIYST VDY  EISYDAVSGFTL ISK+ DG+L+VN VRSEMVD+KKK VLVHIMDGVIMDA FEQSVK DD+ED
Subjt:  -TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

A0A6J1BWY4 uncharacterized protein LOC111006089

1.0e-76

82.14

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAVSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLTT
        MK+SFI+KNPIA  FM+LS+CCILIVLI+TLRLP+LTVGV AV+       KVPK + LGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSL+VNES TT
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAVSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLTT

Query:  EKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED
        EK DDTYA ISR+LGFSAVPR IYS+ VDY KEISYDAVSGFTLYISK+ DG LIVNRVRSEMVDIKKKD++VHIMDGVIMDAEFEQSVK DDSED
Subjt:  EKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

A0A6J1FI64 uncharacterized protein LOC111445644

2.0e-80

86.8

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT
        MKRSFILKNPIA VFM+LSLCCILIVLITTLRLP+LTVG KAV S Q S+I KVPK + LGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSL+VNESLT
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT

Query:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED
        TEK DDTY  ISRILGFSAVPRTIYSTSVDY  EISYDAVSGFTL ISK+ DG LIVNRVRSE VDIKKKDVLVHIMDGVIMDA FEQSVK DDSED
Subjt:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

A0A6J1JYR8 uncharacterized protein LOC111489506

9.7e-80

85.79

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT
        MKRSFILKNPIA VFM+LSLCCILIVLITTLRLP+LTVG KAV S Q S+I K+PK + LGKFGEMMIKMLPKDLAFTVF+PSEKAFERELSLRVNESLT
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAV-SYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLT

Query:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED
        TEK DDTYA ISRILGFSAVPRTIYSTSVDY  EISYDAVSGFTL ISK+ DG LIVNRVRSE VD+KKKDVLVH+MDGVIMDA FEQSVK D SED
Subjt:  TEKFDDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G55820.1 Fasciclin-like arabinogalactan family protein

1.3e-31

38.16

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Query:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPD--LTVG--VKAVSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNE
        MK+   LKNP+  +F+++++  + I++ + L+LP+  L  G  ++ + Y+ +        + LG FG+MMI+MLP+DL FT FVPSEK+F R+L L++N 
Subjt:  MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPD--LTVG--VKAVSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNE

Query:  SLTTEKF------DDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYI-SKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSV
        S   +        D+TYA +SRI+ F+ VP  +    +   +  SY+++SGFTL I  K N G L+VN V +E + +K+  ++VHIM+GV+MD++F QS+
Subjt:  SLTTEKF------DDTYATISRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYI-SKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSV

Query:  KADDSED
         +   +D
Subjt:  KADDSED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGAGGAGCTTCATTTTAAAGAACCCAATTGCATTGGTTTTTATGGTTCTATCTCTTTGTTGCATACTTATTGTACTGATCACAACACTAAGGCTTCCAGACTTGAC
TGTAGGAGTAAAGGCAGTCAGTTATCAAACTTCAATGATCACAAAGGTTCCCAAATTTAATACCTTGGGAAAGTTTGGGGAAATGATGATCAAAATGTTGCCCAAGGATC
TTGCATTTACTGTCTTTGTCCCTTCAGAGAAGGCTTTCGAGCGCGAATTGAGTTTACGAGTAAACGAAAGCTTGACAACTGAGAAGTTTGATGACACATATGCAACGATT
TCACGTATACTGGGTTTCTCTGCTGTTCCTCGAACTATATATTCAACTTCAGTAGATTACAGGAAGGAGATTTCATATGATGCTGTATCTGGATTTACACTGTACATTTC
CAAGAACAATGATGGAAAGCTGATTGTTAACCGAGTGAGGTCTGAAATGGTGGATATAAAGAAGAAGGATGTTCTTGTGCATATAATGGATGGTGTTATCATGGATGCTG
AGTTTGAACAATCAGTGAAGGCTGATGACAGTGAAGATTGA

mRNA sequence

Show/hide mRNA sequence

TTGGGCTGATAACTCATTTCAAAGTGGCCCAGGCCCATAATAGTTAGGCCCAAAGCCTTCTTTTTGTGCAGTACAGTGAAGCTTTCGAAACGATGTCGTTTTCTCTTGAG
ATTTCTTCTCCGATCAACGTCGAAGGGCTTCAAATCTGGTAAATCTCATCGGAAACAATGGCTGGAGAAAATTGGATCCGGCTCGGATCGTGGCTAATCGAATCGGAATT
TCATCATTTTTTATAACTCATGTTCAGGTACTATGATAAATATATAATCAATTCAAGTGTTGGATTATCTACTGATTTCACGAATGTGTTCACTCATGTGAAGATTACTA
TCATTAGTTAATCAAGAAGGTCGGTTTTTATTTTTTGATAACCGAAAATCATAGCTTCACTCCACTCATGCTCGGACGTGAGAGACAATAAGGAATTTAACAATGAATCT
CACATGTGGATTTCAAATTTGGGACCTCCAAACGAACATACCTTAGAGACTCCAAGTCTCTACCAAAGACAACGAGACCGCCCATTGAGTCAATCAAGAAGGTTGGTTTG
AAAATTGAACTCTGTACTTTTTCTCAACTCTGTGCAAGGGAAGCAATAAAGATGTGTGCAGTTTAGTGAACAGAAGATGAAGAGGAGCTTCATTTTAAAGAACCCAATTG
CATTGGTTTTTATGGTTCTATCTCTTTGTTGCATACTTATTGTACTGATCACAACACTAAGGCTTCCAGACTTGACTGTAGGAGTAAAGGCAGTCAGTTATCAAACTTCA
ATGATCACAAAGGTTCCCAAATTTAATACCTTGGGAAAGTTTGGGGAAATGATGATCAAAATGTTGCCCAAGGATCTTGCATTTACTGTCTTTGTCCCTTCAGAGAAGGC
TTTCGAGCGCGAATTGAGTTTACGAGTAAACGAAAGCTTGACAACTGAGAAGTTTGATGACACATATGCAACGATTTCACGTATACTGGGTTTCTCTGCTGTTCCTCGAA
CTATATATTCAACTTCAGTAGATTACAGGAAGGAGATTTCATATGATGCTGTATCTGGATTTACACTGTACATTTCCAAGAACAATGATGGAAAGCTGATTGTTAACCGA
GTGAGGTCTGAAATGGTGGATATAAAGAAGAAGGATGTTCTTGTGCATATAATGGATGGTGTTATCATGGATGCTGAGTTTGAACAATCAGTGAAGGCTGATGACAGTGA
AGATTGAACCTGTTATACAATACATTGTAAGCCACTTATTATCGATGTAACCGAAGGGGTCGATGACGGAACAAGGGAGTTATTTATCGGCCAAACATTCTTATTACAGG
TGTGTGCAAAACTAGATTCCTATCCTTTCCCATTTTGCTCTGCTGTAGAAATAGAATGGCATCCCAAAGTCATCTCTGTCATACATTCTAAAGTTTTTTTTTTTATCGAG
AAAACCAGTTTAAGTTTGTATTAGCTTTTTAAATATGTTCCTCG

Protein sequence

Show/hide protein sequence

MKRSFILKNPIALVFMVLSLCCILIVLITTLRLPDLTVGVKAVSYQTSMITKVPKFNTLGKFGEMMIKMLPKDLAFTVFVPSEKAFERELSLRVNESLTTEKFDDTYATI
SRILGFSAVPRTIYSTSVDYRKEISYDAVSGFTLYISKNNDGKLIVNRVRSEMVDIKKKDVLVHIMDGVIMDAEFEQSVKADDSED

Sed0010184 (gene) of Chayote v1 genome