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Sed0010188 (gene) of Chayote v1 genome

Gene IDSed0010188
OrganismSechium edule (Chayote v1)
DescriptionProtein CutA
Genome locationLG03:8805036..8810306
RNA-Seq ExpressionSed0010188
SyntenySed0010188
Gene Ontology termsGO:0010038 - response to metal ion (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005507 - copper ion binding (molecular function)
InterPro domainsIPR004323 - Divalent ion tolerance protein, CutA
IPR011322 - Nitrogen regulatory PII-like, alpha/beta
IPR015867 - Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065110.1 protein CutA [Cucumis melo var. makuwa]2.1e-4992.86Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEGS+ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES+YQWKGEIQ DPE+LLIIKTRQSLLGALTDHVKA HPYEVPEVIALPINGGSL
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

XP_004152609.1 protein CutA, chloroplastic [Cucumis sativus]1.9e-5094.64Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEGS+ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIESVYQWKGEIQ DPE+LLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

XP_008444893.1 PREDICTED: protein CutA, chloroplastic [Cucumis melo]1.9e-5093.75Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEGS+ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES+YQWKGEIQ DPE+LLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

XP_023545579.1 protein CutA, chloroplastic [Cucurbita pepo subsp. pepo]4.7e-4991.96Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEG++ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIESVYQWKGEIQ D E+LLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS+
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

XP_038886215.1 protein CutA, chloroplastic [Benincasa hispida]1.5e-5094.64Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEGS+ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIESVYQWKGEIQ DPE+LLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

TrEMBL top hitse value%identityAlignment
A0A0A0LRU0 Uncharacterized protein9.2e-5194.64Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEGS+ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIESVYQWKGEIQ DPE+LLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

A0A1S3BBF3 protein CutA, chloroplastic9.2e-5193.75Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEGS+ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES+YQWKGEIQ DPE+LLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

A0A5A7VD29 Protein CutA1.0e-4992.86Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEGS+ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES+YQWKGEIQ DPE+LLIIKTRQSLLGALTDHVKA HPYEVPEVIALPINGGSL
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

A0A6J1HF76 protein CutA, chloroplastic3.0e-4992.86Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEG++ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQ D E+LLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS 
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

A0A6J1K4I7 protein CutA, chloroplastic3.0e-4991.96Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        MEG++ AVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIESVYQWKGEIQ D E+LLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS+
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        EYLE IKSSTKD
Subjt:  EYLELIKSSTKD

SwissProt top hitse value%identityAlignment
O60888 Protein CutA1.2e-2348.98Show/hide
Query:  YVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLELIKSSTK
        +VT PN +  K++A ++V+++LAACVN++  I S+Y+WKG+I+ D E L++IKT+ SL+ ALTD V++ HPYEV EVIALP+  G+  YL+ ++  T+
Subjt:  YVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLELIKSSTK

P93009 Protein CutA, chloroplastic6.4e-4175Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        ME S+  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIV GIESVY+W+G++Q D E+LLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS 
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        +YLE +K+ST++
Subjt:  EYLELIKSSTKD

Q109R6 Protein CutA 1, chloroplastic3.7e-4172.32Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        ME ++  VPSIVVYVTVPN+EAGK+LA SI+ EKLAACVNIV GIESVY W+G++Q D E+LLIIKTR+SLL ALT+HVKANH Y+VPEVIALPI GG+L
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        +YLE +K+ST++
Subjt:  EYLELIKSSTKD

Q7SIA8 Divalent-cation tolerance protein CutA1.3e-2248.48Show/hide
Query:  VVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLELIKSST
        VV +TVP+ E  + +A+++V+E+LAACVNIV G+ S+Y+W+GE+  D E LL++KT       L + VKA HPY VPE++ALPI  G+ EYL+ ++ +T
Subjt:  VVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLELIKSST

Q9CQ89 Protein CutA3.0e-2247.96Show/hide
Query:  YVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLELIKSSTK
        +VT PN +  K++A ++V+++LAACVN++  I S+Y+WKG+I+ D E L++IKT+ SL+ ALT+ V++ HPYEV EVIALP+  G+  YL  +   T+
Subjt:  YVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLELIKSSTK

Arabidopsis top hitse value%identityAlignment
AT2G33740.1 Nitrogen regulatory PII-like, alpha/beta9.5e-3277.91Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYE
        ME S+  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIV GIESVY+W+G++Q D E+LLIIKTRQSLL  LT+HV ANH YE
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYE

AT2G33740.2 Nitrogen regulatory PII-like, alpha/beta4.5e-4275Show/hide
Query:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL
        ME S+  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIV GIESVY+W+G++Q D E+LLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS 
Subjt:  MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSL

Query:  EYLELIKSSTKD
        +YLE +K+ST++
Subjt:  EYLELIKSSTKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTAGCAATGTCGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAATAGGGAAGCAGGTAAGAAATTGGCTGAAAGCATTGTCAAAGAAAAACTTGCTGC
TTGTGTTAACATAGTATCTGGTATAGAATCTGTCTACCAGTGGAAGGGAGAGATCCAGATAGACCCTGAGAAACTTCTGATTATTAAGACCAGACAATCTCTTCTGGGAG
CCCTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGTCTCGAGTACCTGGAGTTGATCAAGAGCAGCACG
AAGGACTGA
mRNA sequenceShow/hide mRNA sequence
GTTGAATGATTTTTTTGAGGTGGTTGAGGAGTGTATTCTCCATGATTGGGGTCTTTTATGAATGAAGCTTCACGATGATTAAAAAGAAAAGAAAAAAAAATTCCCAACCC
AGCATCAACCAGGATTAAAAAACGATTCAACGACGTCGTTTCCCTCTGGTTCGAGCTTCGGATTCTTCAACCTCTATCATCTCCAAAACAGGTTCTGCTCTCTTTCTGCA
TCTCGCCTTTTCTCTCGAGATCGAAATCTGGTGGCCAAGGACCAGCTAGAAACGCACATTTGATCAAAATGGAAGGTAGCAATGTCGCGGTGCCTAGCATTGTTGTTTAT
GTCACTGTTCCTAATAGGGAAGCAGGTAAGAAATTGGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTATCTGGTATAGAATCTGTCTACCAGTG
GAAGGGAGAGATCCAGATAGACCCTGAGAAACTTCTGATTATTAAGACCAGACAATCTCTTCTGGGAGCCCTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGC
CTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGTCTCGAGTACCTGGAGTTGATCAAGAGCAGCACGAAGGACTGACTTTCTCTGCTTTAATATTTTTTTTCAAAGGAA
AAATTATGAATCGTTGTGACAGAAAACCCTCAAATTGAGGAGTTATGGTGGCAATGACATAAAACCTTCGTTTGAATTGAAGGATTGTGAGTGGTTGCGATAAAAAATTC
TCGTTTGAATTGAGTGGTTGAAGTGGGAGTGGAAGTGATATTGTATCCTTAGCGTTTATAGGGGCATTTTGGAGGATTTTGTGAATTTTTTTGTAGCTGCTTCATCTAAA
TATGAGGTTAGAAAAATTGTATGTATTGAAATGATTATACTATCTTTTTTTAAGTTGAGTGAATACTTAAGGCCCC
Protein sequenceShow/hide protein sequence
MEGSNVAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQIDPEKLLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLELIKSST
KD