; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010204 (gene) of Chayote v1 genome

Gene IDSed0010204
OrganismSechium edule (Chayote v1)
DescriptionU6 snRNA phosphodiesterase
Genome locationLG05:4356140..4365600
RNA-Seq ExpressionSed0010204
SyntenySed0010204
Gene Ontology termsGO:0034477 - U6 snRNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990838 - poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (molecular function)
InterPro domainsIPR027521 - U6 snRNA phosphodiesterase Usb1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143673.1 U6 snRNA phosphodiesterase [Cucumis sativus]9.3e-11671.52Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRS
        M+AL A+YGGSSS +EE D     SAS S            PLPPPPLSLL+ PNS C+L                            D PI Q +RVRS
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRS

Query:  FPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYW
        FPHVQGNYALHVYIPVY+PT ARKE+ALF+KKISSLVPALHLVDID+PL++LCKDD KLEQ  AREFHISLSRTVPIRVHQIDSIV+ML QKLQS RRYW
Subjt:  FPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYW

Query:  IDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGI
        IDFS+WETFVNDDLSR+FLSMEI+TGGL+EIRKQIQVVNEVYKLHNLPEFYKE RPHISVAWALGD+S+L SQAV +E +R AVKE  KRCIFTTKFNGI
Subjt:  IDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGI

Query:  ECKIGNKMYKICKFHD
        ECKIG KMYKICKF D
Subjt:  ECKIGNKMYKICKFHD

XP_008467330.1 PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]2.2e-11771.84Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRS
        M+AL A+YGGSSS +EE D    SSAS S            PLPPPPLSLL+ PNS C+L                            D PI Q +RVRS
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRS

Query:  FPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYW
        FPHVQGNYALHVYIPVY+PT ARKE+ALF+KKISSLVPALHLVDID+PL++LCKDDHKLEQ LAREFHISLSRTVPIRVHQIDSIV+ML QKLQS RRYW
Subjt:  FPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYW

Query:  IDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGI
        IDFS+WETFVNDDLSR+FLSMEI+TGGL+EIRKQIQVVNEVYKLHNLPEFYKE RPHIS+AWALGD+S++ SQAV +E +R AVKE  KRCIFTTKFNGI
Subjt:  IDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGI

Query:  ECKIGNKMYKICKFHD
        ECKIG KMYKICKF D
Subjt:  ECKIGNKMYKICKFHD

XP_022969741.1 U6 snRNA phosphodiesterase [Cucurbita maxima]4.3e-11368.83Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS--------------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPI
        MEAL+A+YGGSSS +E+ D    SSASAS                    PLPPPPLSLL  PNS                             A  D PI
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS--------------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPI

Query:  AQPSRVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQK
         Q +RVRSFPHVQGNYA+H+YIPVYIPT ARKE+ALFLKK+S LVPALHLVDID+PL+ILCKDD KLEQ LAREFHISLSRTVPIRVHQIDSIV+ML QK
Subjt:  AQPSRVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQK

Query:  LQSQRRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCI
        LQSQRRYWIDFS+WETFVNDDLSR+FLSMEI+ GGL+EIRK+IQVVNEVYKLHNLPEFYKE RPHIS+AWALGD+SKLLSQ+V DE ++  VKE  KRCI
Subjt:  LQSQRRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCI

Query:  FTTKFNGIECKIGNKMYKICKFHD
        FT KFNGIECKIG KM+KICKF D
Subjt:  FTTKFNGIECKIGNKMYKICKFHD

XP_023549871.1 U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]1.8e-11470Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS----------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPS
        MEAL+A+YGGSSS +E+ D    SSASAS                PLPPPPLSLL  PNS                             A  D PI Q +
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS----------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPS

Query:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ
        RVRSFPHVQGNYA+H+YIPVYIPT ARKE+ALFLKK+S LVPALHLVDID+PL+ILCKDDHKLEQ LAREFHISLSRTVPIRVHQIDSIV+ML QKLQSQ
Subjt:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ

Query:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTK
        RRYWIDFS+WETFVNDDLSR+FLSMEI+ GGL+EIRK IQVVNEVYKLHNLPEFYKE RPHIS+AWALGD+SKLLSQ+V DE ++  VKE  KRCIFT K
Subjt:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTK

Query:  FNGIECKIGNKMYKICKFHD
        FNGIECKIG KM+KICKF D
Subjt:  FNGIECKIGNKMYKICKFHD

XP_038875354.1 U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]1.8e-11470.13Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS--------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRV
        M+AL A+YGGSSS +EE D    SSAS S              PLPPP  SLLH PNS  IL                            D PI Q +RV
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS--------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRV

Query:  RSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRR
        RSFPHVQGNYALH+YIPVY+PT  RKE+ALFLKK+SSLVPALHLVDIDVPL++LCKDDHKLEQ LAREFH+SLSRTVPIRVHQIDSIV+ML QKLQSQRR
Subjt:  RSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRR

Query:  YWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFN
        YWIDFS+WETFVNDDLSR+FLSMEI+TGGL+EIRKQIQ+VNEVYKLHNLPEFYKE RPHIS+AWA+GD+SKLLSQAV +E +  AV +TLKRCIFTTKF 
Subjt:  YWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFN

Query:  GIECKIGNKMYKICKFHD
        GIECKIG K+YKICKF D
Subjt:  GIECKIGNKMYKICKFHD

TrEMBL top hitse value%identityAlignment
A0A0A0KPH5 U6 snRNA phosphodiesterase4.5e-11671.52Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRS
        M+AL A+YGGSSS +EE D     SAS S            PLPPPPLSLL+ PNS C+L                            D PI Q +RVRS
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRS

Query:  FPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYW
        FPHVQGNYALHVYIPVY+PT ARKE+ALF+KKISSLVPALHLVDID+PL++LCKDD KLEQ  AREFHISLSRTVPIRVHQIDSIV+ML QKLQS RRYW
Subjt:  FPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYW

Query:  IDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGI
        IDFS+WETFVNDDLSR+FLSMEI+TGGL+EIRKQIQVVNEVYKLHNLPEFYKE RPHISVAWALGD+S+L SQAV +E +R AVKE  KRCIFTTKFNGI
Subjt:  IDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGI

Query:  ECKIGNKMYKICKFHD
        ECKIG KMYKICKF D
Subjt:  ECKIGNKMYKICKFHD

A0A1S3CTB0 U6 snRNA phosphodiesterase1.1e-11771.84Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRS
        M+AL A+YGGSSS +EE D    SSAS S            PLPPPPLSLL+ PNS C+L                            D PI Q +RVRS
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRS

Query:  FPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYW
        FPHVQGNYALHVYIPVY+PT ARKE+ALF+KKISSLVPALHLVDID+PL++LCKDDHKLEQ LAREFHISLSRTVPIRVHQIDSIV+ML QKLQS RRYW
Subjt:  FPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYW

Query:  IDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGI
        IDFS+WETFVNDDLSR+FLSMEI+TGGL+EIRKQIQVVNEVYKLHNLPEFYKE RPHIS+AWALGD+S++ SQAV +E +R AVKE  KRCIFTTKFNGI
Subjt:  IDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGI

Query:  ECKIGNKMYKICKFHD
        ECKIG KMYKICKF D
Subjt:  ECKIGNKMYKICKFHD

A0A6J1DNL4 U6 snRNA phosphodiesterase5.7e-11169.87Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASA--SP------LPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRSFPHV
        M+AL A+Y GSSS   +E+D+IVS+A +  SP      LPPPPLSLL  PNSI                            A HD PIAQP+R RSFPHV
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASA--SP------LPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRSFPHV

Query:  QGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYWIDFS
        +GNYALHVYIPVYIPTT++KE+ LFLKK+SSLVP+LHLVDIDVPL  LCKD+HKLEQ LAREFHISLSRTVPIRVHQIDSIVSML QKLQ QRRYWIDFS
Subjt:  QGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYWIDFS

Query:  RWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGIECKI
        +WETFVNDDLSR+FLSMEI+ GGL+EIRKQIQVVNEVYK HNLPEFYKEERPHIS+AWALGD+SKLLS+ V D+ +R ++  + KRCIFTTKF+GIECKI
Subjt:  RWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGIECKI

Query:  GNKMYKICKFHD
        G K YKICK  D
Subjt:  GNKMYKICKFHD

A0A6J1EQH7 U6 snRNA phosphodiesterase2.7e-11370.13Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS--------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRV
        MEAL+A+YGGSSS +E+ D    SSASAS              PLPPPPLSLL  PNS                             A  D PI Q +RV
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS--------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRV

Query:  RSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRR
        RSFPHVQGNYALH+YIPVYI T ARKE+ALFLKK+S LVPALHLVDID+PL+ILCKDDHKLEQ LAREFHISLSRTVPIRVHQIDSIV+ML QKLQSQRR
Subjt:  RSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRR

Query:  YWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFN
        YWIDFS+WETFVNDDLSR+FLSMEI+ GGL+EIRK IQVVNEVYKLHNLPEFYKE RPHIS+AWALGD+SKLLSQ+V DE ++  VKE  KR IFT KFN
Subjt:  YWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFN

Query:  GIECKIGNKMYKICKFHD
        GIECKIG KM+KICKF D
Subjt:  GIECKIGNKMYKICKFHD

A0A6J1HYN3 U6 snRNA phosphodiesterase2.1e-11368.83Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS--------------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPI
        MEAL+A+YGGSSS +E+ D    SSASAS                    PLPPPPLSLL  PNS                             A  D PI
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS--------------------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPI

Query:  AQPSRVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQK
         Q +RVRSFPHVQGNYA+H+YIPVYIPT ARKE+ALFLKK+S LVPALHLVDID+PL+ILCKDD KLEQ LAREFHISLSRTVPIRVHQIDSIV+ML QK
Subjt:  AQPSRVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQK

Query:  LQSQRRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCI
        LQSQRRYWIDFS+WETFVNDDLSR+FLSMEI+ GGL+EIRK+IQVVNEVYKLHNLPEFYKE RPHIS+AWALGD+SKLLSQ+V DE ++  VKE  KRCI
Subjt:  LQSQRRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCI

Query:  FTTKFNGIECKIGNKMYKICKFHD
        FT KFNGIECKIG KM+KICKF D
Subjt:  FTTKFNGIECKIGNKMYKICKFHD

SwissProt top hitse value%identityAlignment
Q5I0I5 U6 snRNA phosphodiesterase7.1e-1826.05Show/hide
Query:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ
        R+R+FPH +GN+A H+YIP       +  + + L +     P L                     V   EFH+SLS++V +R H I   V +L  ++ S 
Subjt:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ

Query:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTK
        +R++   +R + + N + +R+F+ +E V+ G  +    +  V+ V K  +L  FY++   H+S+AW +GD    L    + E +    +      +    
Subjt:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTK

Query:  FNGIECKIGNKMYKI
           + CK GNK + +
Subjt:  FNGIECKIGNKMYKI

Q6DEF6 U6 snRNA phosphodiesterase1.2e-1731.16Show/hide
Query:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ
        R+RSF H +GN+A +V+ P Y P  A      FL+ ++ ++ A    DI  PL +            + EFH+SLS+TV +R H I   V  +   L   
Subjt:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ

Query:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTG--GLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFT
        ++++    + + + N + +R+FL ME+ TG   L+E+ K   +V+E  K  NL  FY++   HIS+AW +GD ++ L +A   E +              
Subjt:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTG--GLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFT

Query:  TKFNGIECKIGNKMY
           N + CK GNK++
Subjt:  TKFNGIECKIGNKMY

Q7ZYI9 U6 snRNA phosphodiesterase5.1e-1631.22Show/hide
Query:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ
        R+RSF H +GN+A +VYIP        +    FL  +  LV            ++  ++   L ++   EFHIS S+TV +R H I+  V  L  KL   
Subjt:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ

Query:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETR----RFAVKETLKRCI
         R+     R + + N + +R+FL +E V+ G+  + + +  V+   +  NL  FY+E   H+S+AW +GD  + L  +   E +    RF   +TL    
Subjt:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETR----RFAVKETLKRCI

Query:  FTTKFNG--IECKIGNKMYKI
          T+FN   I CK GNK + I
Subjt:  FTTKFNG--IECKIGNKMYKI

Q91W78 U6 snRNA phosphodiesterase7.6e-2028.37Show/hide
Query:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ
        R+R+FPH +GN+A H+YIP       R  +   L +    VP L                     VL  EFH+SLS++V +R H I   V +L  ++ S 
Subjt:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ

Query:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTK
        +R++   +R + + N + +R+F+ +E V+ G  +    +  V+   K  +L  FY++   HIS+AW +GD S  L      E +    +      +    
Subjt:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTK

Query:  FNGIECKIGNKMYKI
         N + CK GNK + +
Subjt:  FNGIECKIGNKMYKI

Q9BQ65 U6 snRNA phosphodiesterase6.7e-1626.51Show/hide
Query:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ
        RVR+FPH +GN+A HVY+P          + + L    + VP L                     V  + FH+SLS++V +R H I   V  L  ++ S 
Subjt:  RVRSFPHVQGNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQ

Query:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTK
         R++   ++ + + N + +R+F+ +E VT G  +    +  V+ V +  NL  FY++   H+S+AW +GD    L      E +           +    
Subjt:  RRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTK

Query:  FNGIECKIGNKMYKI
           + CK GNK + +
Subjt:  FNGIECKIGNKMYKI

Arabidopsis top hitse value%identityAlignment
AT5G51170.1 unknown protein9.0e-8554.98Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS-------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRSFPHVQ
        MEAL A+YG SSS  + +D    S  +A+        LPPPPL+LL   +SI                           G+   F      RVR+FPHV 
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS-------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRSFPHVQ

Query:  GNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYWIDFSR
        GNYALHVY+PV IP   +KE+  FLKK++S+VP LHLV+ DVPL+ILCKDD K E+ L REFHISL R VP+RVHQI+S++SML QKLQ Q+RY IDF++
Subjt:  GNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYWIDFSR

Query:  WETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGIECKIG
        WE FVNDD +RSFLS+EI T GL EI KQI  VNEVYKLHNLPEFYK+ RPHIS+ WALGDI   L  AV  E R+      ++  IFT+KF GIECKIG
Subjt:  WETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGIECKIG

Query:  NKMYKICKFHD
        NK +KICK  D
Subjt:  NKMYKICKFHD

AT5G51170.2 unknown protein1.4e-5350.21Show/hide
Query:  MEALIATYGGSSSVEEEEDDEIVSSASAS-------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRSFPHVQ
        MEAL A+YG SSS  + +D    S  +A+        LPPPPL+LL   +SI                           G+   F      RVR+FPHV 
Subjt:  MEALIATYGGSSSVEEEEDDEIVSSASAS-------PLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRSFPHVQ

Query:  GNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYWIDFSR
        GNYALHVY+PV IP   +KE+  FLKK++S+VP LHLV+ DVPL+ILCKDD K E+ L REFHISL R VP+RVHQI+S++SML QKLQ Q+RY IDF++
Subjt:  GNYALHVYIPVYIPTTARKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYWIDFSR

Query:  WETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVV
        WE FVNDD +RSFLS+EI T GL E+  ++ ++
Subjt:  WETFVNDDLSRSFLSMEIVTGGLIEIRKQIQVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTCTGATAGCTACGTATGGAGGAAGCTCCTCAGTTGAAGAAGAAGAAGATGATGAAATTGTCTCATCAGCTTCAGCTTCACCACTGCCTCCGCCGCCTCTCTC
GCTTCTTCATCCTCCAAATTCCATATGTATTCTTCTTCTTCGCTTTTACATTTACATTCACAATTTCTTCCTCCATAGCCGAATCTTTCATTGTTTTTCTTGTTTAGGTG
CTTTCCATGATTTCCCAATCGCCCAGCCCAGTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAACTATGCCCTTCATGTCTATATCCCAGTTTATATACCAACTACAGCA
AGGAAGGAGATGGCCCTGTTTCTGAAGAAAATTTCCTCGCTTGTGCCTGCTCTCCATCTTGTTGATATTGACGTTCCTCTGAACATTTTGTGTAAAGATGACCACAAGCT
TGAGCAAGTGTTGGCCAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTACACCAGATTGACTCAATAGTGTCAATGCTTTGCCAGAAGCTTCAGTCTC
AAAGGCGCTATTGGATCGATTTTAGTAGGTGGGAGACTTTTGTTAATGATGATCTCTCCCGCAGCTTTTTGTCCATGGAAATCGTTACTGGAGGGCTGATAGAGATTAGA
AAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGAGAGACCACATATATCTGTAGCTTGGGCATTAGGAGACATTAGTAA
ATTATTGAGTCAAGCAGTTCGCGACGAAACGAGGAGGTTCGCGGTTAAGGAAACATTGAAGAGATGTATTTTCACCACCAAATTCAATGGCATTGAATGCAAGATAGGTA
ACAAAATGTATAAAATATGTAAATTTCATGATGCATAA
mRNA sequenceShow/hide mRNA sequence
AATAATTGCATATATTTTTATTTCCGAGAACAGCACCAAGGTGAGAGATCTGATCGCGTGGGTGGGAATGGAAGCTCTGATAGCTACGTATGGAGGAAGCTCCTCAGTTG
AAGAAGAAGAAGATGATGAAATTGTCTCATCAGCTTCAGCTTCACCACTGCCTCCGCCGCCTCTCTCGCTTCTTCATCCTCCAAATTCCATATGTATTCTTCTTCTTCGC
TTTTACATTTACATTCACAATTTCTTCCTCCATAGCCGAATCTTTCATTGTTTTTCTTGTTTAGGTGCTTTCCATGATTTCCCAATCGCCCAGCCCAGTAGGGTTCGAAG
CTTCCCTCACGTTCAAGGAAACTATGCCCTTCATGTCTATATCCCAGTTTATATACCAACTACAGCAAGGAAGGAGATGGCCCTGTTTCTGAAGAAAATTTCCTCGCTTG
TGCCTGCTCTCCATCTTGTTGATATTGACGTTCCTCTGAACATTTTGTGTAAAGATGACCACAAGCTTGAGCAAGTGTTGGCCAGAGAATTTCACATAAGTTTGTCAAGA
ACAGTGCCAATCCGAGTACACCAGATTGACTCAATAGTGTCAATGCTTTGCCAGAAGCTTCAGTCTCAAAGGCGCTATTGGATCGATTTTAGTAGGTGGGAGACTTTTGT
TAATGATGATCTCTCCCGCAGCTTTTTGTCCATGGAAATCGTTACTGGAGGGCTGATAGAGATTAGAAAACAAATCCAAGTTGTTAATGAGGTTTATAAGCTCCACAATC
TTCCTGAATTTTACAAGGAAGAGAGACCACATATATCTGTAGCTTGGGCATTAGGAGACATTAGTAAATTATTGAGTCAAGCAGTTCGCGACGAAACGAGGAGGTTCGCG
GTTAAGGAAACATTGAAGAGATGTATTTTCACCACCAAATTCAATGGCATTGAATGCAAGATAGGTAACAAAATGTATAAAATATGTAAATTTCATGATGCATAAAAAGA
TTATTATGAATTCTTACTAGTACCTGATTGCTTTCTTGTGTGACCATTAAATTGTTTTTAGTTATTTCGACTTTAAGATCTCTAACTTCCTTTTTGTAAATGGTGCCTCT
TTATTATCTATTCTGATCTTTATGTGTGAAGCTTTATTTACTTCATTTTTAGGAATTTCAGGTTGTACATTATTGACATTAAATTTGATCTGATTGTGTAGAACAAATAA
TGATTAC
Protein sequenceShow/hide protein sequence
MEALIATYGGSSSVEEEEDDEIVSSASASPLPPPPLSLLHPPNSICILLLRFYIYIHNFFLHSRIFHCFSCLGAFHDFPIAQPSRVRSFPHVQGNYALHVYIPVYIPTTA
RKEMALFLKKISSLVPALHLVDIDVPLNILCKDDHKLEQVLAREFHISLSRTVPIRVHQIDSIVSMLCQKLQSQRRYWIDFSRWETFVNDDLSRSFLSMEIVTGGLIEIR
KQIQVVNEVYKLHNLPEFYKEERPHISVAWALGDISKLLSQAVRDETRRFAVKETLKRCIFTTKFNGIECKIGNKMYKICKFHDA