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Sed0010205 (gene) of Chayote v1 genome

Gene IDSed0010205
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:22167580..22167822
RNA-Seq ExpressionSed0010205
SyntenySed0010205
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588222.1 hypothetical protein SDJN03_16787, partial [Cucurbita argyrosperma subsp. sororia]6.4e-1667.74Show/hide
Query:  MPRPRHQRQPSQVLPPELISGEDPSQILD----VAGAVSGQPHQ---PPGATAAAGANAAA------VKSPAGEGVSGAAHFPQLPKTPPSTA
        MPRPRH RQPSQVLPPELISGEDPSQILD    VAGA SGQPHQ      A AAA ANAAA       K  A + VSGA  FPQL KTPPS A
Subjt:  MPRPRHQRQPSQVLPPELISGEDPSQILD----VAGAVSGQPHQ---PPGATAAAGANAAA------VKSPAGEGVSGAAHFPQLPKTPPSTA

KAG6590166.1 hypothetical protein SDJN03_15589, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1364.77Show/hide
Query:  MPRPRHQRQPSQVLPPELISGEDPSQILD----VAGAVSGQPHQ-PPGATAAAGANAAAVKSPAGEGV----SGAAHFPQLPKTPPST
        MPRPRHQRQPSQVLPPELISG DPSQILD    VA  VSGQPH+    AT  A A A   +S    G     SG+ HFPQLPKTPPST
Subjt:  MPRPRHQRQPSQVLPPELISGEDPSQILD----VAGAVSGQPHQ-PPGATAAAGANAAAVKSPAGEGV----SGAAHFPQLPKTPPST

KGN66547.1 hypothetical protein Csa_007065 [Cucumis sativus]2.6e-1769.66Show/hide
Query:  MPRPRHQRQPSQVLPPELISGEDPSQILD----VAGAVSGQPHQPPGATAAAGANAAAV------KSPAGEGVSGAAHFPQLPKTPPST
        MPRPRHQRQ SQVLPP+ IS EDPSQILD    VAGAVSGQPHQP  ATA A A AAA       K+PAG+  SGA HF QLPKT PST
Subjt:  MPRPRHQRQPSQVLPPELISGEDPSQILD----VAGAVSGQPHQPPGATAAAGANAAAV------KSPAGEGVSGAAHFPQLPKTPPST

TrEMBL top hitse value%identityAlignment
A0A0A0M0A1 Uncharacterized protein1.3e-1769.66Show/hide
Query:  MPRPRHQRQPSQVLPPELISGEDPSQILD----VAGAVSGQPHQPPGATAAAGANAAAV------KSPAGEGVSGAAHFPQLPKTPPST
        MPRPRHQRQ SQVLPP+ IS EDPSQILD    VAGAVSGQPHQP  ATA A A AAA       K+PAG+  SGA HF QLPKT PST
Subjt:  MPRPRHQRQPSQVLPPELISGEDPSQILD----VAGAVSGQPHQPPGATAAAGANAAAV------KSPAGEGVSGAAHFPQLPKTPPST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCCACGTCACCAACGTCAGCCCTCTCAAGTTCTCCCACCGGAGCTCATCTCCGGCGAGGACCCATCCCAGATCTTGGATGTCGCCGGAGCAGTTTCGGGCCA
ACCCCATCAACCACCTGGAGCTACGGCTGCTGCTGGTGCAAATGCCGCCGCCGTCAAATCTCCAGCCGGTGAGGGGGTCTCCGGCGCCGCCCACTTTCCTCAGCTCCCCA
AGACGCCGCCGTCCACTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGTCCACGTCACCAACGTCAGCCCTCTCAAGTTCTCCCACCGGAGCTCATCTCCGGCGAGGACCCATCCCAGATCTTGGATGTCGCCGGAGCAGTTTCGGGCCA
ACCCCATCAACCACCTGGAGCTACGGCTGCTGCTGGTGCAAATGCCGCCGCCGTCAAATCTCCAGCCGGTGAGGGGGTCTCCGGCGCCGCCCACTTTCCTCAGCTCCCCA
AGACGCCGCCGTCCACTGCCTGA
Protein sequenceShow/hide protein sequence
MPRPRHQRQPSQVLPPELISGEDPSQILDVAGAVSGQPHQPPGATAAAGANAAAVKSPAGEGVSGAAHFPQLPKTPPSTA