CuGenDBv2

Gene ID	Sed0010236
Organism	Sechium edule (Chayote v1)
Description	protein Asterix-like
Genome location	LG08:1506733..1508757
RNA-Seq Expression	Sed0010236
Synteny	Sed0010236
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0045048 - protein insertion into ER membrane (biological process) GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR005351 - PAT complex subunit Asterix

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587575.1 Protein Asterix, partial [Cucurbita argyrosperma subsp. sororia]

5.2e-47

97.03

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSAAKPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_004138191.1 protein Asterix [Cucumis sativus]

3.7e-45

94.06

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSA KPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPG K
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_008453260.1 PREDICTED: protein Asterix [Cucumis melo]

9.8e-46

95.05

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSA KPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPGTK
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_022933634.1 protein Asterix-like [Cucurbita moschata]

5.2e-47

97.03

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSAAKPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_038880376.1 protein Asterix [Benincasa hispida]

6.8e-47

97.03

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LSF0 Uncharacterized protein

1.8e-45

94.06

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSA KPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPG K
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A1S3BWL0 protein Asterix

4.7e-46

95.05

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSA KPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL PARPGTK
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1E5Z1 protein Asterix-like

4.0e-45

93.07

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSAAKPFV+P VNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYL P RPGTK
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1F0A5 protein Asterix-like

2.5e-47

97.03

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSAAKPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1KYK4 protein Asterix-like

2.5e-47

97.03

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Query:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        MSTQ+NDPRQPSAAKPFV+PAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSW+AIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
Subjt:  MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

SwissProt top hits

e value

%identity

Alignment

Q09993 Protein Asterix

3.3e-04

30.69

Show/hide

Query:  QSNDPRQPSAA---KPFVAPAVNPQDLPVD----YSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPAR
        Q+ DPR+ +     KP  + A   Q +  D    Y   + ++F + G+M R K  SW+A++    S AN R   +D KQI  + M ++  +V +YL    
Subjt:  QSNDPRQPSAA---KPFVAPAVNPQDLPVD----YSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPAR

Query:  P
        P
Subjt:  P

Q9SD88 Protein Asterix

1.1e-39

82.11

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Query:  NDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        NDPRQPSAAKP++   V P+DLPVDYSGFIAV+ G++GVMFRYK+ SW+AIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGP RP TK
Subjt:  NDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Arabidopsis top hits

e value

%identity

Alignment

AT5G07960.1 unknown protein

7.7e-41

82.11

Show/hide

Query:  NDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK
        NDPRQPSAAKP++   V P+DLPVDYSGFIAV+ G++GVMFRYK+ SW+AIIFCAQSLANMRN+ENDLKQISMAMMFAIMGLVTNYLGP RP TK
Subjt:  NDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTK

Sequences

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CDS sequence

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ATGTCGACACAATCGAACGATCCACGGCAGCCGTCGGCGGCGAAGCCGTTCGTTGCTCCGGCAGTAAATCCTCAAGATCTGCCCGTCGATTATTCCGGTTTCATCGCCGT
AGTTTTCGGCATCGCCGGTGTCATGTTCAGGTACAAGCTTAGTTCGTGGATTGCCATCATATTTTGCGCCCAATCGCTTGCCAATATGAGGAACATGGAGAACGATCTCA
AGCAGATTTCCATGGCCATGATGTTTGCCATCATGGGATTGGTAACGAATTACTTGGGACCTGCACGACCAGGAACAAAGAGTTAG

mRNA sequence

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Protein sequence

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MSTQSNDPRQPSAAKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWIAIIFCAQSLANMRNMENDLKQISMAMMFAIMGLVTNYLGPARPGTKS

Sed0010236 (gene) of Chayote v1 genome