; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010270 (gene) of Chayote v1 genome

Gene IDSed0010270
OrganismSechium edule (Chayote v1)
Descriptionprotein LSD1
Genome locationLG10:195434..201223
RNA-Seq ExpressionSed0010270
SyntenySed0010270
Gene Ontology termsGO:0007034 - vacuolar transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005768 - endosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052452.1 vacuolar protein sorting-associated protein 2-like protein 2 [Cucumis melo var. makuwa]1.1e-8997.65Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDK
        KCAICHYVTNVGISNVRVPIPVHR NGTISSGMPP+SSSQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDK

KAG7026406.1 Vacuolar protein sorting-associated protein 2-like 2 [Cucurbita argyrosperma subsp. argyrosperma]7.1e-8995.91Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLIC GCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTL+FPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVG+SNVRVPIPVHR NGTISSGMPPASSSQ+QTVVVENPMSVDESGKLVSN+VVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

XP_008439499.1 PREDICTED: protein LSD1 [Cucumis melo]2.9e-9097.66Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVGISNVRVPIPVHR NGTISSGMPP+SSSQ+QTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

XP_011658526.1 vacuolar protein sorting-associated protein 2 homolog 2 [Cucumis sativus]2.9e-9097.66Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVGISNVRVPIPVHR NGTISSGMPP+SSSQ+QTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

XP_022925664.1 vacuolar protein sorting-associated protein 2 homolog 2-like [Cucurbita moschata]4.2e-8995.91Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALC+TVTSVPPPGTDMAQLICGGCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVG+SNVRVPIPVHR NGT+SSGMPP+SSSQ+QTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

TrEMBL top hitse value%identityAlignment
A0A0A0KJ18 Uncharacterized protein1.4e-9097.66Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVGISNVRVPIPVHR NGTISSGMPP+SSSQ+QTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

A0A1S3AZJ7 protein LSD11.4e-9097.66Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVGISNVRVPIPVHR NGTISSGMPP+SSSQ+QTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

A0A5A7U9M7 Vacuolar protein sorting-associated protein 2-like protein 25.3e-9097.65Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDK
        KCAICHYVTNVGISNVRVPIPVHR NGTISSGMPP+SSSQ+QTVVVENPMSVDESGKLVSNVVVGVTTDK
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDK

A0A6J1ECU7 vacuolar protein sorting-associated protein 2 homolog 2-like2.0e-8995.91Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALC+TVTSVPPPGTDMAQLICGGCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVG+SNVRVPIPVHR NGT+SSGMPP+SSSQ+QTVVVENPMSVDESGKLVSNVVVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

A0A6J1KY38 vacuolar protein sorting-associated protein 2 homolog 2-like3.4e-8995.91Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV
        MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLIC GCRTLLM+ARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTL+FPYGAPSV
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSV

Query:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        KCAICHYVTNVG+SNVRVPIPVHR NGTISSGMPPASSSQ+QTVVVENPMSVDESGKLVSN+VVGVTTDKR
Subjt:  KCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

SwissProt top hitse value%identityAlignment
P94077 Protein LSD12.0e-6266.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LM+ RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN RVP+P +R NGT     PP++S     SQTQTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

Q0J7V9 Protein LSD17.0e-4774.34Show/hide
Query:  QSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVK
        QSQLVCSGCR++L+YP GAT+VCCA+C+TVT+VP PGT+MAQL+CGGC TLLM+ RGATSV+CSCCHTVNLA   NQVAHVNCGNCR  L++ YGA SVK
Subjt:  QSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVK

Query:  CAICHYVTNVGIS
        CA+C++VT+VG S
Subjt:  CAICHYVTNVGIS

Q2QMB3 Protein LOL21.6e-5462.72Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTS-VPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPS
        MQSQ+VC GCR+ILLYP GA +VCCA+C+ V+S  P PG D+A LICGGCRTLLM+ R ATSVRCSCC TVNL    + +AH+NCG C+T L++PYGAPS
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTS-VPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPS

Query:  VKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTT
        VKCAIC+++TN G++ +R  +P +  + T  S   P + SQ  TVVVENPM+VD  GKLVSNVVVGVTT
Subjt:  VKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTT

Q6ASS2 Protein LOL32.8e-5660.22Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPG--TDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAP
        MQSQ+VC GCRS+L YP GA +VCCALC  +T+VPPP    +MA LICGGCRTLLM+ R A +VRCSCC TVNL    N +AHV+CG CRTTL++PYGAP
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPG--TDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAP

Query:  SVKCAICHYVTNVGISNVR-VPIPVHRHNGTISSGMP-------------PASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDK
        SVKCAICHY+TN G++ V   P P+   +G+  +  P             P S  Q  TVVVENPM+VDE GKLVSNVVVGVTT K
Subjt:  SVKCAICHYVTNVGISNVR-VPIPVHRHNGTISSGMP-------------PASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDK

Q93ZB1 Protein LOL12.7e-4674.77Show/hide
Query:  QSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVK
        QSQLVCSGCR++L+YP GAT+VCCA+CN VT+VPPPGT+MAQL+CGGC TLLM+ RGATSV+CSCCHTVNLA   NQVAHVNCGNC   L++ YGA SVK
Subjt:  QSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVK

Query:  CAICHYVTNVG
        CA+C++VT+VG
Subjt:  CAICHYVTNVG

Arabidopsis top hitse value%identityAlignment
AT4G20380.1 LSD1 zinc finger family protein1.4e-6366.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LM+ RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN RVP+P +R NGT     PP++S     SQTQTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.2 LSD1 zinc finger family protein1.4e-6366.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LM+ RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN RVP+P +R NGT     PP++S     SQTQTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.3 LSD1 zinc finger family protein1.4e-6366.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LM+ RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN RVP+P +R NGT     PP++S     SQTQTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.4 LSD1 zinc finger family protein1.4e-6366.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LM+ RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN RVP+P +R NGT     PP++S     SQTQTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR

AT4G20380.5 LSD1 zinc finger family protein1.4e-6366.84Show/hide
Query:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT
        MQ QLVC GCR++L+YP GA+NV CALCNT+  VPPP    DMA +ICGGCRT+LM+ RGA+SVRCSCC T NL PA +NQVAH        +NCG+CRT
Subjt:  MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGT--DMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPA-TNQVAH--------VNCGNCRT

Query:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR
        TL++PYGA SVKCA+C +VTNV +SN RVP+P +R NGT     PP++S     SQTQTVVVENPMSVDESGKLVSNVVVGVTTDK+
Subjt:  TLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRHNGTISSGMPPASS-----SQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGTCAACTTGTATGCAGTGGGTGTAGGAGCATTCTTCTTTATCCTGGAGGGGCTACCAATGTATGCTGTGCATTATGCAATACAGTCACCTCAGTTCCTCCTCC
TGGAACAGATATGGCTCAACTTATATGTGGAGGTTGCAGGACATTACTTATGCACGCACGTGGGGCAACAAGTGTTAGATGCTCATGCTGTCATACTGTGAACCTTGCAC
CTGCTACGAACCAGGTTGCACATGTTAATTGTGGAAACTGCCGAACAACTCTCGTTTTTCCATATGGAGCTCCATCTGTCAAGTGTGCGATCTGTCACTATGTTACAAAT
GTTGGAATATCCAATGTGAGGGTTCCTATTCCAGTGCACAGACATAATGGAACAATTAGCTCTGGGATGCCCCCTGCATCATCATCTCAGACCCAAACTGTTGTAGTTGA
GAATCCTATGTCAGTTGATGAAAGTGGCAAATTGGTGAGCAATGTTGTTGTTGGTGTCACGACGGATAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
GTAAAAAGAAAAAATCAACATTAATCGAAGTTCTCGTTTCCATCCTCATCCTCTCGAGCCGGCAATAGCTCTGCGATCGTCTTCTTCATAATCGATCCTTCGTTCATCAT
CTCCTCCTCCTCCATTCAGATTTCATCTCGGGGATTCGACGTGATCGTTTCGGTCGATAATCGGCAAGGAGGAGGATCGGAAGAAGGCTGTACCAAGAGGGCCGAGGACA
AGAAGAGCTTCTTAACCCACAAGCTATGCAGAGTCAACTTGTATGCAGTGGGTGTAGGAGCATTCTTCTTTATCCTGGAGGGGCTACCAATGTATGCTGTGCATTATGCA
ATACAGTCACCTCAGTTCCTCCTCCTGGAACAGATATGGCTCAACTTATATGTGGAGGTTGCAGGACATTACTTATGCACGCACGTGGGGCAACAAGTGTTAGATGCTCA
TGCTGTCATACTGTGAACCTTGCACCTGCTACGAACCAGGTTGCACATGTTAATTGTGGAAACTGCCGAACAACTCTCGTTTTTCCATATGGAGCTCCATCTGTCAAGTG
TGCGATCTGTCACTATGTTACAAATGTTGGAATATCCAATGTGAGGGTTCCTATTCCAGTGCACAGACATAATGGAACAATTAGCTCTGGGATGCCCCCTGCATCATCAT
CTCAGACCCAAACTGTTGTAGTTGAGAATCCTATGTCAGTTGATGAAAGTGGCAAATTGGTGAGCAATGTTGTTGTTGGTGTCACGACGGATAAAAGGTAACTTGGTGAG
ATGATGGTTGATTGATGGCATTTACTATTAGCGGCTTAAGAAGAAAGGATGGGAGGGAAGCGATCGATCTATATCTAGTACATCACTATACTGGTTGGGATATGATGATT
ATGGTTGTGGAAATTTCTGTATAGTTTGTCTTTGGATTTGCCCCGAGGTTACACCATTCATTCTTGAGTCAACTTCAATTTGAGGTTCAGAGAACTTTTGTACCCTGTGA
ATGTGATGTATATTGTGGACAAAGAAAAATTAAGGGTCTGTACTAAACTACTAGTGATTTCTGTACCGAATCATTGAGCTGTCTTGCAAGTAAAAATATTATACATCCAT
CATATCCCTTCAGGTATATATGAGTATAAACGTTGTCTTGTAATCTTTTTCCCTTGATTTGCTGATATGGATTTTGAATTT
Protein sequenceShow/hide protein sequence
MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMHARGATSVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVKCAICHYVTN
VGISNVRVPIPVHRHNGTISSGMPPASSSQTQTVVVENPMSVDESGKLVSNVVVGVTTDKR