; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010283 (gene) of Chayote v1 genome

Gene IDSed0010283
OrganismSechium edule (Chayote v1)
Descriptionneurofilament medium polypeptide-like
Genome locationLG10:34512695..34519298
RNA-Seq ExpressionSed0010283
SyntenySed0010283
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059564.1 hypothetical protein E6C27_scaffold518G00820 [Cucumis melo var. makuwa]2.6e-2948.29Show/hide
Query:  EIDGDFNDYSGSKQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKE
        E+D D  D    + +E + +  +  + T +   E    AEA NGD ATMI+KKP V+TQSQASID+EA                           RE KE
Subjt:  EIDGDFNDYSGSKQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKE

Query:  LETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKRE
        LET+KEPE I SPY + PA  ++EKG D+K +SFQTK E K+ +   K T  DS    KQEK QDSKQ K+RT I+IAGSALLASLV V FN+VKS K E
Subjt:  LETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKRE

Query:  KNMRG
        KN++G
Subjt:  KNMRG

KAG6607636.1 hypothetical protein SDJN03_00978, partial [Cucurbita argyrosperma subsp. sororia]8.1e-3951.26Show/hide
Query:  MKEIDGDFNDYSGSKQLEKVAIKTIEYEATR---NGSM--------EGIKVAEA------------------HNGDIATMIHKKPDVQTQSQASIDQEAQ
        M++ DG  NDYS S++LE  A K  EYE T+   NG +        EGI+VAE                   HNGD+ATMI KKPDV+TQ QASIDQE  
Subjt:  MKEIDGDFNDYSGSKQLEKVAIKTIEYEATR---NGSM--------EGIKVAEA------------------HNGDIATMIHKKPDVQTQSQASIDQEAQ

Query:  VSDPELLQPNRQTQAESGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETK----ECKSPLKETIVDSITKQEKNQDSK
            E  + NR T+ E G+ +TY   R + +L   KEPE IE PY +SPA ++EEK  DQK KSFQTK+ETK    EC SP K T  DS   +E  Q+ K
Subjt:  VSDPELLQPNRQTQAESGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETK----ECKSPLKETIVDSITKQEKNQDSK

Query:  QFKIRTPILIAGSALLASLVIVVFNMVKSKKREKNMRG
        QFK+R PI++AGSAL+A+LVI VF++VKSKKREKNMRG
Subjt:  QFKIRTPILIAGSALLASLVIVVFNMVKSKKREKNMRG

TYK14803.1 hypothetical protein E5676_scaffold1081G00020 [Cucumis melo var. makuwa]2.6e-2948.29Show/hide
Query:  EIDGDFNDYSGSKQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKE
        E+D D  D    + +E + +  +  + T +   E    AEA NGD ATMI+KKP V+TQSQASID+EA                           RE KE
Subjt:  EIDGDFNDYSGSKQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKE

Query:  LETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKRE
        LET+KEPE I SPY + PA  ++EKG D+K +SFQTK E K+ +   K T  DS    KQEK QDSKQ K+RT I+IAGSALLASLV V FN+VKS K E
Subjt:  LETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKRE

Query:  KNMRG
        KN++G
Subjt:  KNMRG

XP_022143634.1 uncharacterized protein LOC111013495 [Momordica charantia]5.2e-3848.21Show/hide
Query:  MKEIDGDFNDYSGSKQLEKV---------------------------AIKTIEY-EATRNGSM-----EGIKVAEAHNGDIATMIHKKPDVQTQSQASID
        M+ IDG  N YS S++ EK+                           ++K IE  E T  G+      +G   +EAHNG IATM +K+PD++ QSQA++D
Subjt:  MKEIDGDFNDYSGSKQLEKV---------------------------AIKTIEY-EATRNGSM-----EGIKVAEAHNGDIATMIHKKPDVQTQSQASID

Query:  QEAQVSD-PELLQPNRQTQAE------SGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECK----SPLKETIVDS
        ++ +V D PEL QPN + QAE       G ++TY    ESKE ET  EPE I SPY +SP  ++EEKG +Q+ KSFQT++E KE +    SP +E    S
Subjt:  QEAQVSD-PELLQPNRQTQAE------SGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECK----SPLKETIVDS

Query:  I--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKREKNMRG
            KQEK QDSKQFK+RTPI+IAGSALLASL IVVFN V+SKKREKNMRG
Subjt:  I--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKREKNMRG

XP_023521223.1 neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo]3.5e-4254.2Show/hide
Query:  MKEIDGDFNDYSGSKQLEKVAIKTIEYEATR---NG--------SMEGIKVAEA------------------HNGDIATMIHKKPDVQTQSQASIDQEAQ
        M++ DG  NDYS S+QLE  A K  EYE T+   NG        SMEGI+VAE                   HNGD+ATMI KKPDV+TQSQASIDQE  
Subjt:  MKEIDGDFNDYSGSKQLEKVAIKTIEYEATR---NG--------SMEGIKVAEA------------------HNGDIATMIHKKPDVQTQSQASIDQEAQ

Query:  VSDPELLQPNRQTQAESGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETK----ECKSPLKETIVDSITKQEKNQDSK
            E  + NR T+AE G+ +TY   R ++EL   KEPE IE PY +SPA ++EEK  DQK KS QTK+ETK    EC SP K T  DS   +E  Q+ K
Subjt:  VSDPELLQPNRQTQAESGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETK----ECKSPLKETIVDSITKQEKNQDSK

Query:  QFKIRTPILIAGSALLASLVIVVFNMVKSKKREKNMRG
        QFK+R PI++AGSAL+ASLVIVVF++VKSKKREKNMRG
Subjt:  QFKIRTPILIAGSALLASLVIVVFNMVKSKKREKNMRG

TrEMBL top hitse value%identityAlignment
A0A0A0K807 Uncharacterized protein8.7e-2346.11Show/hide
Query:  KQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKELETEKEPEGIES
        +  E + +  +  + T N   E    AEA NGD ATMI+KKP V+TQ+QASID+EAQ                               LET+KEPE I S
Subjt:  KQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKELETEKEPEGIES

Query:  PYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFN
        PY   P   +E+K  D+K +SFQTK+E K+ +   K T  DS    KQEK QDSKQFK+RT I+IAGSALLAS+VIV FN
Subjt:  PYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFN

A0A5A7UWU5 Uncharacterized protein1.3e-2948.29Show/hide
Query:  EIDGDFNDYSGSKQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKE
        E+D D  D    + +E + +  +  + T +   E    AEA NGD ATMI+KKP V+TQSQASID+EA                           RE KE
Subjt:  EIDGDFNDYSGSKQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKE

Query:  LETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKRE
        LET+KEPE I SPY + PA  ++EKG D+K +SFQTK E K+ +   K T  DS    KQEK QDSKQ K+RT I+IAGSALLASLV V FN+VKS K E
Subjt:  LETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKRE

Query:  KNMRG
        KN++G
Subjt:  KNMRG

A0A5D3CSD6 Uncharacterized protein1.3e-2948.29Show/hide
Query:  EIDGDFNDYSGSKQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKE
        E+D D  D    + +E + +  +  + T +   E    AEA NGD ATMI+KKP V+TQSQASID+EA                           RE KE
Subjt:  EIDGDFNDYSGSKQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKE

Query:  LETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKRE
        LET+KEPE I SPY + PA  ++EKG D+K +SFQTK E K+ +   K T  DS    KQEK QDSKQ K+RT I+IAGSALLASLV V FN+VKS K E
Subjt:  LETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSI--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKRE

Query:  KNMRG
        KN++G
Subjt:  KNMRG

A0A6J1CPW6 uncharacterized protein LOC1110134952.5e-3848.21Show/hide
Query:  MKEIDGDFNDYSGSKQLEKV---------------------------AIKTIEY-EATRNGSM-----EGIKVAEAHNGDIATMIHKKPDVQTQSQASID
        M+ IDG  N YS S++ EK+                           ++K IE  E T  G+      +G   +EAHNG IATM +K+PD++ QSQA++D
Subjt:  MKEIDGDFNDYSGSKQLEKV---------------------------AIKTIEY-EATRNGSM-----EGIKVAEAHNGDIATMIHKKPDVQTQSQASID

Query:  QEAQVSD-PELLQPNRQTQAE------SGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECK----SPLKETIVDS
        ++ +V D PEL QPN + QAE       G ++TY    ESKE ET  EPE I SPY +SP  ++EEKG +Q+ KSFQT++E KE +    SP +E    S
Subjt:  QEAQVSD-PELLQPNRQTQAE------SGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECK----SPLKETIVDS

Query:  I--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKREKNMRG
            KQEK QDSKQFK+RTPI+IAGSALLASL IVVFN V+SKKREKNMRG
Subjt:  I--TKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKREKNMRG

A0A6J1EKH3 neurofilament medium polypeptide-like2.0e-1946.24Show/hide
Query:  MKEIDGDFNDYSGSKQLEKVAIKTIEYEATR---NG--------SMEGIKVAEA-------------------HNGDIATMIHKKPDVQTQSQASIDQEA
        M++ DG  NDYS  +QLE  A K  EYE T+   NG        SMEGI+VAE                    HNGDIATMI KK DV+TQ QASIDQEA
Subjt:  MKEIDGDFNDYSGSKQLEKVAIKTIEYEATR---NG--------SMEGIKVAEA-------------------HNGDIATMIHKKPDVQTQSQASIDQEA

Query:  QVSDPELLQPNRQTQAESGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETK
        Q  + E  + NR T+AE G+ +TY   R ++EL   KEPE IE PY +SPA ++EEK    ++K+ Q+ + TK
Subjt:  QVSDPELLQPNRQTQAESGEQDTYTIIRESKELETEKEPEGIESPYSKSPAIDNEEKGHDQKRKSFQTKNETK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAATCGATGGAGACTTCAATGACTACTCTGGAAGTAAACAATTAGAAAAAGTAGCAATAAAAACTATAGAGTATGAGGCCACCAGAAATGGAAGTATGGAAGG
AATAAAAGTGGCTGAAGCACATAATGGTGATATAGCAACAATGATACATAAGAAACCAGATGTCCAAACACAATCACAAGCTTCAATTGATCAAGAGGCACAAGTTTCAG
ACCCAGAACTTTTGCAGCCAAATCGACAGACTCAAGCAGAATCGGGCGAGCAAGATACATATACAATCATTCGCGAATCGAAAGAACTTGAAACTGAAAAAGAACCAGAA
GGTATAGAAAGTCCATATTCGAAAAGCCCTGCAATCGACAATGAAGAAAAAGGGCATGATCAAAAACGAAAAAGCTTCCAAACAAAAAACGAAACTAAGGAATGCAAGTC
ACCATTAAAGGAGACAATAGTAGATTCTATCACAAAGCAAGAGAAAAACCAAGATTCAAAACAGTTTAAAATCCGTACTCCAATCCTCATTGCAGGGTCAGCTCTTCTGG
CCTCCCTTGTAATTGTTGTCTTTAACATGGTGAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAATCGATGGAGACTTCAATGACTACTCTGGAAGTAAACAATTAGAAAAAGTAGCAATAAAAACTATAGAGTATGAGGCCACCAGAAATGGAAGTATGGAAGG
AATAAAAGTGGCTGAAGCACATAATGGTGATATAGCAACAATGATACATAAGAAACCAGATGTCCAAACACAATCACAAGCTTCAATTGATCAAGAGGCACAAGTTTCAG
ACCCAGAACTTTTGCAGCCAAATCGACAGACTCAAGCAGAATCGGGCGAGCAAGATACATATACAATCATTCGCGAATCGAAAGAACTTGAAACTGAAAAAGAACCAGAA
GGTATAGAAAGTCCATATTCGAAAAGCCCTGCAATCGACAATGAAGAAAAAGGGCATGATCAAAAACGAAAAAGCTTCCAAACAAAAAACGAAACTAAGGAATGCAAGTC
ACCATTAAAGGAGACAATAGTAGATTCTATCACAAAGCAAGAGAAAAACCAAGATTCAAAACAGTTTAAAATCCGTACTCCAATCCTCATTGCAGGGTCAGCTCTTCTGG
CCTCCCTTGTAATTGTTGTCTTTAACATGGTGAAAAGTAAAAAACGAGAGAAAAATATGAGAGGTTAA
Protein sequenceShow/hide protein sequence
MKEIDGDFNDYSGSKQLEKVAIKTIEYEATRNGSMEGIKVAEAHNGDIATMIHKKPDVQTQSQASIDQEAQVSDPELLQPNRQTQAESGEQDTYTIIRESKELETEKEPE
GIESPYSKSPAIDNEEKGHDQKRKSFQTKNETKECKSPLKETIVDSITKQEKNQDSKQFKIRTPILIAGSALLASLVIVVFNMVKSKKREKNMRG