; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010317 (gene) of Chayote v1 genome

Gene IDSed0010317
OrganismSechium edule (Chayote v1)
DescriptionCttnbp 2 amino-terminal-like protein
Genome locationLG08:36411387..36415230
RNA-Seq ExpressionSed0010317
SyntenySed0010317
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573242.1 hypothetical protein SDJN03_27129, partial [Cucurbita argyrosperma subsp. sororia]7.8e-7287.12Show/hide
Query:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS
        NFSET R R+MG+ESYGWSP GA PLD QRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP P+AFSH    RS LDPEAQMG A KLGH 
Subjt:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS

Query:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
        SPKMTVYS GVSVLMPGDHIPTYIA PAPVPCPPERIPWPQ QQNTISYATTSSHFTE SSSL
Subjt:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

KAG7012413.1 hypothetical protein SDJN02_25165, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-7187.12Show/hide
Query:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS
        NFSET R R+MG+ESYGWSP GA PLD QRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP P+AFSH    RS LDPEAQMG A KLGH 
Subjt:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS

Query:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
        SPKMTVYS GVSVLMPGDHIPTYIA PAPVPCPPERIPWPQ QQNTISYATTSSHFTE SSSL
Subjt:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

XP_022139852.1 uncharacterized protein LOC111010664 [Momordica charantia]1.0e-7184.62Show/hide
Query:  MAKWGGFNFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVA
        M+K G  NFSETFR   MG+E YGWSPIGA PLD  R+DHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRPAPTAFSH A RS LDPEAQ+  A
Subjt:  MAKWGGFNFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVA

Query:  RKLGHSSPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
         KLGH SPKMTVYSCGVSVLMPGDHIPTYIA PAPVPCPPERIPWPQHQ NT SYATTSSH TENSSSL
Subjt:  RKLGHSSPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

XP_022954759.1 uncharacterized protein LOC111456916 [Cucurbita moschata]2.3e-7187.12Show/hide
Query:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS
        NFSET R R+MG+ESYGWSP GA PLD QRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP P+AFSH    RS LDPEAQMG A KLGH 
Subjt:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS

Query:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
        SPKMTVYS GVSVLMPGDHIPTYIA PAPVPCPPERIPWPQ QQNTISYATTSSHFTE SSSL
Subjt:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

XP_023001755.1 uncharacterized protein LOC111495798 [Cucurbita maxima]3.9e-7185.8Show/hide
Query:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSS
        N SETF   +MG+E YGWSP GA PLD QR+DHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP PTAFSHA  R+ LDPEAQMG A KLGH S
Subjt:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSS

Query:  PKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
        PKMTVYSCGVSVLMPGDHIPTYIA PAPVPCPPERIPWPQHQ N +SYATTSSHFTENSSSL
Subjt:  PKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

TrEMBL top hitse value%identityAlignment
A0A6J1CF31 uncharacterized protein LOC1110106644.9e-7284.62Show/hide
Query:  MAKWGGFNFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVA
        M+K G  NFSETFR   MG+E YGWSPIGA PLD  R+DHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRPAPTAFSH A RS LDPEAQ+  A
Subjt:  MAKWGGFNFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVA

Query:  RKLGHSSPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
         KLGH SPKMTVYSCGVSVLMPGDHIPTYIA PAPVPCPPERIPWPQHQ NT SYATTSSH TENSSSL
Subjt:  RKLGHSSPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

A0A6J1EI19 uncharacterized protein LOC1114343632.7e-7085.19Show/hide
Query:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSS
        N SETF   +MG+E YGWSP GA PLD QR+DHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP PTAFSHA  R+ LDPEAQMG A KLGH S
Subjt:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSS

Query:  PKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
        PKMTVYSCGVSVLMPGDHIPTYIA PAPV CPPERIPWPQHQ N +SYATTSSHFTENSSSL
Subjt:  PKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

A0A6J1GTZ3 uncharacterized protein LOC1114569161.1e-7187.12Show/hide
Query:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS
        NFSET R R+MG+ESYGWSP GA PLD QRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP P+AFSH    RS LDPEAQMG A KLGH 
Subjt:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS

Query:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
        SPKMTVYS GVSVLMPGDHIPTYIA PAPVPCPPERIPWPQ QQNTISYATTSSHFTE SSSL
Subjt:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

A0A6J1JVY8 uncharacterized protein LOC1114901912.7e-7085.89Show/hide
Query:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS
        NFSET   R+MG+ESYGWSP GA PLD QRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP P+AFSH    RS L PEAQMG A KLGH 
Subjt:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSH-AAARSRLDPEAQMGVARKLGHS

Query:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
        SPKMTVYS GVSVLMPGDHIPTYIA PAPVPCPPERIPWPQ QQNTISYATTSSHFTE SSSL
Subjt:  SPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

A0A6J1KM25 uncharacterized protein LOC1114957981.9e-7185.8Show/hide
Query:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSS
        N SETF   +MG+E YGWSP GA PLD QR+DHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP PTAFSHA  R+ LDPEAQMG A KLGH S
Subjt:  NFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSS

Query:  PKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL
        PKMTVYSCGVSVLMPGDHIPTYIA PAPVPCPPERIPWPQHQ N +SYATTSSHFTENSSSL
Subjt:  PKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09812.1 unknown protein4.0e-1842.64Show/hide
Query:  DESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFS--HAAARSRLDPEAQMGVARKLGHSSPKMTVYSCGV
        ++S  WS     P +   +  WR    S++A+SFGFVATAIL+SMFL+MAIFE   RP  ++F   H   + + D  +Q           P  TV    V
Subjt:  DESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFS--HAAARSRLDPEAQMGVARKLGHSSPKMTVYSCGV

Query:  SVLMPGDHIPTYIALPAPVPCPPERIPWP
        SV+MPG+ +P++IALPAP+PC  E I WP
Subjt:  SVLMPGDHIPTYIALPAPVPCPPERIPWP

AT1G11120.1 unknown protein6.0e-3045.45Show/hide
Query:  SYGWSPIGAPPLDPQRQDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHA-AARSRLDPEAQM-----GVARKLGHSSPK-----
        ++ W PIGA P++ +R++ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R   T+ +++ ++ SR+ P         G A KLG+ SPK     
Subjt:  SYGWSPIGAPPLDPQRQDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHA-AARSRLDPEAQM-----GVARKLGHSSPK-----

Query:  ---------------------MTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTE
                             MTVYS GVSVLMPGD IPT+IA PAPVPCPP+ I   QHQ  +   +++S+   E
Subjt:  ---------------------MTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTE

AT1G11120.2 unknown protein3.1e-3453.33Show/hide
Query:  SYGWSPIGAPPLDPQRQDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHA-AARSRLDPEAQM-----GVARKLGHSSPKMTVYS
        ++ W PIGA P++ +R++ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R   T+ +++ ++ SR+ P         G A KLG+ SPKMTVYS
Subjt:  SYGWSPIGAPPLDPQRQDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHA-AARSRLDPEAQM-----GVARKLGHSSPKMTVYS

Query:  CGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTE
         GVSVLMPGD IPT+IA PAPVPCPP+ I   QHQ  +   +++S+   E
Subjt:  CGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTE

AT1G58007.1 unknown protein4.9e-1644.66Show/hide
Query:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSSPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPW
        +S++A+SFGFVATAIL+ MF++MAI E   R      S  ++   +D  +Q    +KL   +  + V +  VSV+MPGD +P+Y+ALPAP PC  E I W
Subjt:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSSPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPW

Query:  PQH
        P H
Subjt:  PQH

AT1G58007.2 unknown protein4.9e-1644.66Show/hide
Query:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSSPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPW
        +S++A+SFGFVATAIL+ MF++MAI E   R      S  ++   +D  +Q    +KL   +  + V +  VSV+MPGD +P+Y+ALPAP PC  E I W
Subjt:  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSSPKMTVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPW

Query:  PQH
        P H
Subjt:  PQH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAATGGGGAGGTTTTAATTTCTCTGAAACTTTTCGCCGTCGTGATATGGGTGATGAAAGCTATGGATGGTCCCCTATTGGGGCTCCGCCGCTCGACCCGCAGAG
ACAGGACCATTGGAGGCATTTCGACAACTCCGTTGATGCTGTCTCTTTTGGGTTTGTTGCTACTGCCATTCTCGTCTCTATGTTCTTGCTCATGGCTATTTTTGAGCGGT
TTCTTCGACCGGCTCCCACGGCTTTCTCTCACGCCGCTGCTCGGAGCCGCCTCGACCCCGAGGCTCAGATGGGTGTTGCTCGAAAGCTTGGTCACTCTTCACCCAAAATG
ACTGTATATTCATGTGGAGTTTCGGTGCTTATGCCTGGAGATCATATTCCTACATATATCGCCCTCCCAGCTCCTGTCCCGTGCCCCCCTGAACGCATTCCGTGGCCACA
ACATCAACAAAACACCATCTCTTATGCCACCACCAGTTCTCATTTCACTGAAAACTCAAGTTCCTTATAA
mRNA sequenceShow/hide mRNA sequence
CTGCCAAGAACTTTTCTCTGGGTTCTGCGCTGATTAACCCACCATGACCTGCAATGGCAAAATGGGGAGGTTTTAATTTCTCTGAAACTTTTCGCCGTCGTGATATGGGT
GATGAAAGCTATGGATGGTCCCCTATTGGGGCTCCGCCGCTCGACCCGCAGAGACAGGACCATTGGAGGCATTTCGACAACTCCGTTGATGCTGTCTCTTTTGGGTTTGT
TGCTACTGCCATTCTCGTCTCTATGTTCTTGCTCATGGCTATTTTTGAGCGGTTTCTTCGACCGGCTCCCACGGCTTTCTCTCACGCCGCTGCTCGGAGCCGCCTCGACC
CCGAGGCTCAGATGGGTGTTGCTCGAAAGCTTGGTCACTCTTCACCCAAAATGACTGTATATTCATGTGGAGTTTCGGTGCTTATGCCTGGAGATCATATTCCTACATAT
ATCGCCCTCCCAGCTCCTGTCCCGTGCCCCCCTGAACGCATTCCGTGGCCACAACATCAACAAAACACCATCTCTTATGCCACCACCAGTTCTCATTTCACTGAAAACTC
AAGTTCCTTATAAGATCAAAGAAACCAAGCATGGAAAAAGGTCTGCTCTATTACAACTCTACTTGAGAAATTGATTCAAGCAAAACTAATCTCCAAAACTGAGTCAGAAA
GGTACCATAATTGAAGCTGTTTTTCCCCAATTTCCAGAGGTTATAATTCTGTATATACGCTCACAGCCCACCTTGCTTTTCCTCATCTGACTACATGCCCTTCTTCAAGG
TAGCAAGTTTCACATTTTTCAGCCTTCCACAAGGTTTAGCTTTTATCTCCTTTTTGCCCTTCAGATTTGGCTTGACAGCCTCAGCAATCATATAGAAAATTTTTATTGTG
AGGAATGTGCAGTGTAAAAATTGTTACTCGAATACGGGTGAACTTCAACCGTCGAGACATGTGTGAAATGCTTACTCATTTCTTCTCTTTACAATGATTATCCAATCTGT
GTTCTACTAGAATCAATCCAAAAACTATGTTCTTGCATTGCTCAAAAGCATCATATCAAAATGCCTATGTTGAAGTCTGTATCAGTAAAAGGTACAAGAAATGCCCATGC
CTAAGATCATAGCCCCCAAAGAGCAATATTTTATGGCTTTTGAATCCTAACACAGGAAAAAATGTCTCATATCTGCTATA
Protein sequenceShow/hide protein sequence
MAKWGGFNFSETFRRRDMGDESYGWSPIGAPPLDPQRQDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPAPTAFSHAAARSRLDPEAQMGVARKLGHSSPKM
TVYSCGVSVLMPGDHIPTYIALPAPVPCPPERIPWPQHQQNTISYATTSSHFTENSSSL