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Sed0010320 (gene) of Chayote v1 genome

Gene IDSed0010320
OrganismSechium edule (Chayote v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationLG09:9766335..9766866
RNA-Seq ExpressionSed0010320
SyntenySed0010320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]1.5e-1968.04Show/hide
Query:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKK---KPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL+LL AVVLLTTTQALK+ SDSNQ+VIP++D++LPTTT T T+      DEES FYKK   K  + K PPYKK P YKKHPPYKKYPPSS+
Subjt:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKK---KPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]1.5e-1968.04Show/hide
Query:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKK---KPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL+LL AVVLLTTTQALK+ SDSNQ+VIP++D++LPTTT T T+      DEES FYKK   K  + K PPYKK P YKKHPPYKKYPPSS+
Subjt:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKK---KPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]1.3e-1260.78Show/hide
Query:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSD---QKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPS
        M LKYFL+LL AVVLLTTTQALK+ S+SNQ+VIP +D    KLPTT      T P   +EES FY+     KKP   K PPYK+ P YKK PPYKKYPPS
Subjt:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSD---QKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPS

Query:  SN
        S+
Subjt:  SN

XP_022930415.1 uncharacterized protein LOC111436870 [Cucurbita moschata]1.9e-1968.09Show/hide
Query:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M +KYFL+LL AVVLLTTTQALK+ SDS  +VIPVS+QKLP+T  T T+T+P  E EES FY+K+  + KYPPYK+ P YKK PPYKKYPPSSN
Subjt:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

XP_023513909.1 repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo]2.3e-2069.15Show/hide
Query:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M +KYFL+LL AVVLLTTTQALK+ SDS  +VIPVS+QKLP+T  T T+T+P  E EES FY+K+P + KYPPYK+ P YKK PPYKKYPPSSN
Subjt:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein6.4e-1360.78Show/hide
Query:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSD---QKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPS
        M LKYFL+LL AVVLLTTTQALK+ S+SNQ+VIP +D    KLPTT      T P   +EES FY+     KKP   K PPYK+ P YKK PPYKKYPPS
Subjt:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSD---QKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPS

Query:  SN
        S+
Subjt:  SN

A0A0A0LNP2 Uncharacterized protein1.7e-1058.59Show/hide
Query:  KYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSD---QKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        KYFL+LL AVVLLTTTQALK+  +SNQ+ IP +D    KLPTT      T P   +EES F++     KKP   K PPYKK P YKK PPYKKYPPSS+
Subjt:  KYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSD---QKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like4.6e-1155.56Show/hide
Query:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL+LL A VLL+TTQALK+ S S+Q+VIP +D    T   T+ +      +EES FY+     KKP   K PPYKK P YKK PPYKKYPPSS+
Subjt:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like4.6e-1155.56Show/hide
Query:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M LKYFL+LL A VLL+TTQALK+ S S+Q+VIP +D    T   T+ +      +EES FY+     KKP   K PPYKK P YKK PPYKKYPPSS+
Subjt:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYK-----KKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

A0A6J1EWV3 uncharacterized protein LOC1114368709.2e-2068.09Show/hide
Query:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN
        M +KYFL+LL AVVLLTTTQALK+ SDS  +VIPVS+QKLP+T  T T+T+P  E EES FY+K+  + KYPPYK+ P YKK PPYKKYPPSSN
Subjt:  MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGAAATACTTTCTTGTTCTTCTTTTCGCCGTGGTGCTTCTTACCACAACTCAAGCTCTAAAAAATGCGTCAGACTCCAACCAGAAAGTAATTCCGGTTAGCGA
CCAAAAGCTACCGACCACGACCATGACCATGACCGAGACCAAACCCGAGTTAGAAGACGAGGAATCCAACTTCTACAAGAAGAAACCTCGCCACCCGAAGTACCCACCCT
ACAAGAAACGTCCCTCATACAAGAAACATCCTCCATACAAGAAGTACCCACCATCCTCCAACTGA
mRNA sequenceShow/hide mRNA sequence
CAAAAATCCACAATGTCTCTGAAATACTTTCTTGTTCTTCTTTTCGCCGTGGTGCTTCTTACCACAACTCAAGCTCTAAAAAATGCGTCAGACTCCAACCAGAAAGTAAT
TCCGGTTAGCGACCAAAAGCTACCGACCACGACCATGACCATGACCGAGACCAAACCCGAGTTAGAAGACGAGGAATCCAACTTCTACAAGAAGAAACCTCGCCACCCGA
AGTACCCACCCTACAAGAAACGTCCCTCATACAAGAAACATCCTCCATACAAGAAGTACCCACCATCCTCCAACTGAATGTCGCCCTAAACTTTAAGACCATGAACGTGA
CATGATTAATACACAAATAAGCACTACTATAACTGTAGTGCCCCAAGTTTAGGATAATAATAAGACACGTTCATGTTGCCTTTTGATTTCTATAATATGTTAACAACTTG
GCATGTGCCATATGGGAGTATTATCTTTACATTATGCTTCGCTTATTATGTGATCTATGTTTGAATCGTATAATATTTTGTTTTTCTTCCAA
Protein sequenceShow/hide protein sequence
MSLKYFLVLLFAVVLLTTTQALKNASDSNQKVIPVSDQKLPTTTMTMTETKPELEDEESNFYKKKPRHPKYPPYKKRPSYKKHPPYKKYPPSSN