CuGenDBv2

Gene ID	Sed0010334
Organism	Sechium edule (Chayote v1)
Description	Rubredoxin-like domain-containing protein
Genome location	LG12:34724930..34726158
RNA-Seq Expression	Sed0010334
Synteny	Sed0010334
Gene Ontology terms	GO:0016020 - membrane (cellular component) GO:0005506 - iron ion binding (molecular function)
InterPro domains	IPR024934 - Rubredoxin-like domain IPR024935 - Rubredoxin domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022921625.1 uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]

1.3e-45

61.5

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD
        MAS SA+SL F H  P  HS +NQ                   +LKSSF SP    P             R+++   + AP+FSMR+A  SKQ AYICRD
Subjt:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD

Query:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPI-AAAVGVVALVALYLYLNTVF
        CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYE++VTK DN+ DVRK RKAQIQKDEAIGK+LPI AAAVG+VALV LYLYLN+VF
Subjt:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPI-AAAVGVVALVALYLYLNTVF

XP_022927654.1 uncharacterized protein LOC111434474 [Cucurbita moschata]

1.5e-46

64.25

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQ----------VKTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYND
        MASVSATSLRF  P P QHS + Q            +LKSSFFSP    P             R++ S  + AP+ SMR+A  SKQ AYICRDCGYIYND
Subjt:  MASVSATSLRFLHPLPKQHSSVNQ----------VKTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYND

Query:  RTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF
        RTPFEKLPD YFCPVCGAPKRRFRPYE++VTK  N+ D RK RKAQIQKDEAIGK+LPIAAAVG+VALV LYLYLN  F
Subjt:  RTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF

XP_022987160.1 uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima]

3.3e-46

60.75

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD
        MAS SA+SL F H  P  HS +NQ                   +LKSSF SP    P             R+++   + AP+FS+R+A  SKQ AYICRD
Subjt:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD

Query:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF
        CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYE++VTK DN+ D RK RKAQIQKDEAIGK+LPIAAAVG+VALV LYLYLN+VF
Subjt:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF

XP_023516579.1 uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]

1.1e-46

61.29

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD
        MAS SA+SL F H  P  HS +NQ                   +LKSSF SP    P             R+++   + AP+FSMR+A  SKQ AYICRD
Subjt:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD

Query:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF
        CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYE++VTK DN+ DVRK RKAQIQKDEAIGK+LPIAAAVG++ALV LYLYLN+VF
Subjt:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF

XP_023531329.1 uncharacterized protein LOC111793604 [Cucurbita pepo subsp. pepo]

3.3e-46

63.69

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQ----------VKTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYND
        MASVSATSLRF  P P QHS + Q            +LKSSFFSP    P             R++ S  + AP+ SMR+A  SKQ AYICRDCGYIYND
Subjt:  MASVSATSLRFLHPLPKQHSSVNQ----------VKTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYND

Query:  RTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF
        RTPF+KLPD YFCPVCGAPKRRFRPYE++VTK  N+ D RK RKAQIQKDEAIGK+LPIAAAVG+VALV LYLYLN  F
Subjt:  RTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UPF0 Rubredoxin family protein

1.4e-45

60.75

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQVK-----------------TLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD
        MASVSA+SL F H  PK H  +NQ                   +LKSSF SP    P            RR+    A+ +P+FSMR+A  SKQ AYICRD
Subjt:  MASVSATSLRFLHPLPKQHSSVNQVK-----------------TLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD

Query:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF
        CGYIYNDRTPF+KLPD YFCPVCGAPKRRFRPYE+TV K DN+ D+RK RKAQIQKDEAIGK+LPIAAA+G+VALV LYLYLN+VF
Subjt:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF

A0A6J1E6B5 uncharacterized protein LOC111429830 isoform X1

6.1e-46

61.5

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD
        MAS SA+SL F H  P  HS +NQ                   +LKSSF SP    P             R+++   + AP+FSMR+A  SKQ AYICRD
Subjt:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD

Query:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPI-AAAVGVVALVALYLYLNTVF
        CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYE++VTK DN+ DVRK RKAQIQKDEAIGK+LPI AAAVG+VALV LYLYLN+VF
Subjt:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPI-AAAVGVVALVALYLYLNTVF

A0A6J1EIL7 uncharacterized protein LOC111434474

7.2e-47

64.25

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQ----------VKTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYND
        MASVSATSLRF  P P QHS + Q            +LKSSFFSP    P             R++ S  + AP+ SMR+A  SKQ AYICRDCGYIYND
Subjt:  MASVSATSLRFLHPLPKQHSSVNQ----------VKTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYND

Query:  RTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF
        RTPFEKLPD YFCPVCGAPKRRFRPYE++VTK  N+ D RK RKAQIQKDEAIGK+LPIAAAVG+VALV LYLYLN  F
Subjt:  RTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF

A0A6J1IG97 uncharacterized protein LOC111473110

7.2e-47

64.25

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQ----------VKTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYND
        MASVSATSLRF  P P QHS + Q            +LKSSFFSP    P             R++ S  + AP+ SMR+A  SKQ AYICRDCGYIYND
Subjt:  MASVSATSLRFLHPLPKQHSSVNQ----------VKTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYND

Query:  RTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF
        RTPFEKLPD YFCPVCGAPKRRFRPYE++VTK  N+ D RK RKAQIQKDEAIGK+LPIAAAVG+VALV LYLYLN  F
Subjt:  RTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF

A0A6J1JG21 uncharacterized protein LOC111484793 isoform X1

1.6e-46

60.75

Show/hide

Query:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD
        MAS SA+SL F H  P  HS +NQ                   +LKSSF SP    P             R+++   + AP+FS+R+A  SKQ AYICRD
Subjt:  MASVSATSLRFLHPLPKQHSSVNQV-----------------KTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRD

Query:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF
        CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYE++VTK DN+ D RK RKAQIQKDEAIGK+LPIAAAVG+VALV LYLYLN+VF
Subjt:  CGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF

SwissProt top hits

e value

%identity

Alignment

O26258 Probable rubredoxin

2.2e-05

41.82

Show/hide

Query:  SKQAAYICRDCGYIYNDR-----------TPFEKLPDNYFCPVCGAPKRRFRPYE
        S    Y CR CGYIY+             TPFE LP+ + CP CGA K+ F+P +
Subjt:  SKQAAYICRDCGYIYNDR-----------TPFEKLPDNYFCPVCGAPKRRFRPYE

P04170 Rubredoxin-1

1.3e-05

48.78

Show/hide

Query:  YICRDCGYIY----NDRTPFEKLPDNYFCPVCGAPKRRFRP
        Y+C  CGY Y    +D  PF++LPD++ CPVCG  K +F P
Subjt:  YICRDCGYIY----NDRTPFEKLPDNYFCPVCGAPKRRFRP

P24297 Rubredoxin

4.5e-06

42.31

Show/hide

Query:  AAYICRDCGYIYND-----------RTPFEKLPDNYFCPVCGAPKRRFRPYE
        A ++C+ CGYIY++            T FE+LPD++ CP+CGAPK  F   E
Subjt:  AAYICRDCGYIYND-----------RTPFEKLPDNYFCPVCGAPKRRFRPYE

P58992 Rubredoxin-1

1.3e-05

40.38

Show/hide

Query:  QAAYICRDCGYIYNDR-----------TPFEKLPDNYFCPVCGAPKRRFRPY
        QA+++C +CGYIY+              PF+KLPD++ CPVC  PK +F  +
Subjt:  QAAYICRDCGYIYNDR-----------TPFEKLPDNYFCPVCGAPKRRFRPY

Q9V099 Rubredoxin

8.5e-05

42.31

Show/hide

Query:  AAYICRDCGYIYND-----------RTPFEKLPDNYFCPVCGAPKRRFRPYE
        A + C+ CGYIY++            T FE LPD++ CP+CGAPK  F   E
Subjt:  AAYICRDCGYIYND-----------RTPFEKLPDNYFCPVCGAPKRRFRPYE

Arabidopsis top hits

e value

%identity

Alignment

AT5G17170.1 rubredoxin family protein

5.0e-08

Show/hide

Query:  PQFSMRLAPNSK-QAAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALY
        P+F  +L    K +A +IC DCG+IY     F++ PD Y CP C APK+RF  Y+              T KA       IG ++ + A +G V  + +Y
Subjt:  PQFSMRLAPNSK-QAAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALY

AT5G51010.1 Rubredoxin-like superfamily protein

3.0e-37

58.45

Show/hide

Query:  KSSFFSPPSPPPL-RDNMNP--TRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDN
        +SS   PP+ P L R +  P  + R    ++    S AP+FSMR+   S + AYICRDCGYIYNDRTPF+KLPDNYFCPVC APKRRFR Y   V+K  N
Subjt:  KSSFFSPPSPPPL-RDNMNP--TRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEKTVTKKDN

Query:  QLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNT
          DVRK RKA++Q+DEA+GK LPI  AVGV+AL ALY Y+N+
Subjt:  QLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCGTTTCAGCTACTTCTCTGCGCTTTCTTCACCCACTGCCGAAGCAACATTCCAGCGTTAACCAGGTGAAGACTTTGAAATCCTCCTTCTTCTCTCCTCCTTC
TCCTCCTCCTTTACGTGACAACATGAATCCAACAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGCTGTGCAAGTGTTGCCCCTCAGTTCTCCATGCGCCTCGCTCCTAATT
CCAAACAAGCCGCCTACATCTGCCGTGACTGCGGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAACTATTTCTGTCCTGTTTGTGGTGCTCCTAAG
CGAAGATTTAGGCCTTATGAGAAAACGGTCACTAAAAAGGACAACCAATTGGATGTCAGGAAGACCAGAAAGGCCCAGATCCAGAAAGATGAAGCTATTGGGAAGCTGCT
GCCTATTGCCGCTGCAGTGGGAGTCGTAGCACTTGTAGCTTTGTACTTGTACCTCAATACCGTCTTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASVSATSLRFLHPLPKQHSSVNQVKTLKSSFFSPPSPPPLRDNMNPTRRGRRRRRRSCASVAPQFSMRLAPNSKQAAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPK
RRFRPYEKTVTKKDNQLDVRKTRKAQIQKDEAIGKLLPIAAAVGVVALVALYLYLNTVF

Sed0010334 (gene) of Chayote v1 genome