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Sed0010339 (gene) of Chayote v1 genome

Gene IDSed0010339
OrganismSechium edule (Chayote v1)
DescriptionGAG1At protein
Genome locationLG09:37938376..37941341
RNA-Seq ExpressionSed0010339
SyntenySed0010339
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1223321.1 hypothetical protein CJ030_MR2G001433 [Morella rubra]1.1e-2680.77Show/hide
Query:  DGASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        +G  SGGGGGGFRS +E YLYSGDKKHV AGIA+I V+FG+PW LM+RGSKH+SHQDYMEKADKARSQRLSSG+SSAK
Subjt:  DGASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
XP_004135879.1 uncharacterized protein LOC101214375 [Cucumis sativus]1.4e-2680.72Show/hide
Query:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        MS  A SG   GG GGFRS ME YLYSGDKKHVAAGI + G++FGIPW LMNRGSKHRSHQDYME+ADKARSQRLSSGSSSAK
Subjt:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
XP_022150938.1 uncharacterized protein LOC111018966 [Momordica charantia]4.1e-2681.82Show/hide
Query:  GASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        G   GGGG GFRS ME +LYSGDKKHVAAGIAVI ++FGIPWVLM+RGSKH+SHQDYME+ADKARSQRLSSGSS AK
Subjt:  GASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
XP_022953259.1 uncharacterized protein LOC111455862 [Cucurbita moschata]6.3e-2781.93Show/hide
Query:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        MS  A SG   GGGGGFRS ME YLYSG+KKHVAAGI VIG++FGIPW LMNRGSKH+SHQDYME+ADKARSQRLSSGSSSAK
Subjt:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
XP_022992483.1 uncharacterized protein LOC111488802 [Cucurbita maxima]4.8e-2781.93Show/hide
Query:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        MS  A SG   GGGGGFRS ME YLYSG+KKHVAAGI VIG++FGIPW LMNRGSKH+SHQDYME+ADKARSQRLSSGSSSAK
Subjt:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
TrEMBL top hitse value%identityAlignment
A0A5D3CFG0 Uncharacterized protein3.3e-2679.52Show/hide
Query:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        MS  A SG   GG GGFRS ME YLYSGDKKHVAAGI + G++FGIPW LMNRGSKH+SHQDYME+ADKARSQRLSSGSSSAK
Subjt:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
A0A6A1WDR3 Uncharacterized protein5.2e-2780.77Show/hide
Query:  DGASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        +G  SGGGGGGFRS +E YLYSGDKKHV AGIA+I V+FG+PW LM+RGSKH+SHQDYMEKADKARSQRLSSG+SSAK
Subjt:  DGASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
A0A6J1DAT5 uncharacterized protein LOC1110189662.0e-2681.82Show/hide
Query:  GASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        G   GGGG GFRS ME +LYSGDKKHVAAGIAVI ++FGIPWVLM+RGSKH+SHQDYME+ADKARSQRLSSGSS AK
Subjt:  GASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
A0A6J1GP50 uncharacterized protein LOC1114558623.0e-2781.93Show/hide
Query:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        MS  A SG   GGGGGFRS ME YLYSG+KKHVAAGI VIG++FGIPW LMNRGSKH+SHQDYME+ADKARSQRLSSGSSSAK
Subjt:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
A0A6J1JZC0 uncharacterized protein LOC1114888022.3e-2781.93Show/hide
Query:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        MS  A SG   GGGGGFRS ME YLYSG+KKHVAAGI VIG++FGIPW LMNRGSKH+SHQDYME+ADKARSQRLSSGSSSAK
Subjt:  MSDGASSG---GGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16000.1 unknown protein9.0e-2461.73Show/hide
Query:  KMSDGASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        K + G +S  GGGGFR+ ME Y+YSG+KKHV  GI ++ ++FG+PW LM +GSKH+SHQDYM+KADKAR  RLSS SS+ K
Subjt:  KMSDGASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
AT1G80890.1 unknown protein8.1e-2567.5Show/hide
Query:  MSDGASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK
        M + + S  GGGG R+ ME Y+YSG+KKHV AGI +I ++FGIPW LMN+GSKHRSHQDY+EKADKAR  RLSS SSS K
Subjt:  MSDGASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGAGCATTTGAGCAAAACCGGAAGTGGAGACCCGGAGGAGCTAATCTCACTTCGACAGAATCGCCGGCCAAAATGAGCGACGGTGCGAGCTCCGGCGGCGGCGG
CGGCGGCTTCCGATCGAGTATGGAGCGATATTTATACAGCGGCGACAAAAAGCACGTCGCGGCCGGCATCGCCGTCATCGGTGTCCTCTTCGGCATCCCTTGGGTACTCA
TGAACCGAGGATCAAAACATCGGTCTCATCAAGATTACATGGAAAAAGCTGACAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGA
mRNA sequenceShow/hide mRNA sequence
CAAAAACACCGTAACCAAACGCTCCAAATATGCACAGAGCATTTGAGCAAAACCGGAAGTGGAGACCCGGAGGAGCTAATCTCACTTCGACAGAATCGCCGGCCAAAATG
AGCGACGGTGCGAGCTCCGGCGGCGGCGGCGGCGGCTTCCGATCGAGTATGGAGCGATATTTATACAGCGGCGACAAAAAGCACGTCGCGGCCGGCATCGCCGTCATCGG
TGTCCTCTTCGGCATCCCTTGGGTACTCATGAACCGAGGATCAAAACATCGGTCTCATCAAGATTACATGGAAAAAGCTGACAAAGCACGAAGTCAGAGACTCTCTTCAG
GTTCATCATCAGCTAAATGATTTTTATTTAATTTTTTTTTTCTGGCTTTCTTCTGATAGGAGATGTTCTTTGGAGCAGTTAGTTTACATAACTTTCTTGTAATAGCTCAT
ATATTTTTCATATTTTTCATATTTTTCTATCTCTGCTGACATTAAATGGAGACAGGTAAGTTACACTCACCTAGGTACACTCATGGTTATGAAATAAAGGACAGATTTTT
TTTTGTTCCTTTTATAA
Protein sequenceShow/hide protein sequence
MHRAFEQNRKWRPGGANLTSTESPAKMSDGASSGGGGGGFRSSMERYLYSGDKKHVAAGIAVIGVLFGIPWVLMNRGSKHRSHQDYMEKADKARSQRLSSGSSSAK