; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010343 (gene) of Chayote v1 genome

Gene IDSed0010343
OrganismSechium edule (Chayote v1)
DescriptionAP2/ERF domain-containing transcription factor
Genome locationLG07:7742435..7744125
RNA-Seq ExpressionSed0010343
SyntenySed0010343
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574150.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5069.01Show/hide
Query:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI
        HP+FRGVRSRSGKWVSEIR+PR++TRIWLGTYPTPDMAAAAYDVAALALKGP ASLNFPD+LLSY IPSSTS SDIRAAAA+AAA+R  P   P P PA 
Subjt:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI

Query:  PMDPLAA------TDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS
           P+           A+++ G ++D ++LLNMPNLL+DMA G+L+SPPRIKS S SDDSP+NS   GLWS
Subjt:  PMDPLAA------TDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS

TYK22276.1 ethylene-responsive transcription factor ERF027 [Cucumis melo var. makuwa]1.6e-4962.03Show/hide
Query:  PPAPHPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDP
        PP  H  FRG+RSRSGKWVSEIREPRK+TRIWLGTYPTP+MAAAAYDVAAL LKGP+ASLNFP SLLSY IP STS SDIRAAAA+AAA+R P    P  
Subjt:  PPAPHPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDP

Query:  TPAIPMDPLAATDQASSS-----------------GGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS--DHGLWS
        +PA      A T + SS                   G ++D ++LLNMPNLL+DMA G+L+SPPR+KSPS+ D+SP++S  D GLWS
Subjt:  TPAIPMDPLAATDQASSS-----------------GGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS--DHGLWS

XP_022945058.1 ethylene-responsive transcription factor ERF027-like [Cucurbita moschata]5.5e-5069.01Show/hide
Query:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI
        HP+FRGVRSRSGKWVSEIR+PR++TRIWLGTYPTPDMAAAAYDVAALALKGP ASLNFPD+LLSY IPSSTS SDIRAAAA+AAA+R  P   P P PA 
Subjt:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI

Query:  PMDPLAATDQASSSGGA------YMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS
           P+     +S +  A      ++D ++LLNMPNLL+DMA G+L+SPPRIKS S SDDSP+NS   GLWS
Subjt:  PMDPLAATDQASSSGGA------YMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS

XP_022968030.1 ethylene-responsive transcription factor ERF027-like [Cucurbita maxima]3.5e-5270.52Show/hide
Query:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI
        HP+FRGVRSRSGKWVSEIR+PR++TRIWLGTYPTPDMAAAAYDVAALALKGP ASLNFPDSLLSYHIPSSTS SDIRAAAA+AAA+R  P   P P PA 
Subjt:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI

Query:  PMDPL--------AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS
           P+        A    A++S G ++D ++LLNMPNLL+DMA G+L+SPPRIKS S SDDSP+NS   GLWS
Subjt:  PMDPL--------AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS

XP_023542005.1 ethylene-responsive transcription factor ERF025 [Cucurbita pepo subsp. pepo]2.9e-5169.19Show/hide
Query:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPD--PTP
        HP+FRGVRSRSGKWVSEIR+PR++TRIWLGTYPTPDMAAAAYDVAALALKGP ASLNFPD+LLSY IPSSTS SDIRAAAA+AAA+R     HPD  P P
Subjt:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPD--PTP

Query:  AIPMDPLAATD-----QASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS
        A    P+  +       A+++ G ++D ++LLNMPNLL+DMA G+L+SPPRIKS S SDDSP+NS   GLWS
Subjt:  AIPMDPLAATD-----QASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS

TrEMBL top hitse value%identityAlignment
A0A1S3AYS1 ethylene-responsive transcription factor ERF0271.0e-4962.03Show/hide
Query:  PPAPHPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDP
        PP  H  FRG+RSRSGKWVSEIREPRK+TRIWLGTYPTP+MAAAAYDVAAL LKGP+ASLNFP SLLSY IP STS SDIRAAAA+AAA+R P    P  
Subjt:  PPAPHPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDP

Query:  TPAIPMDPLAATDQASS-----------------SGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS--DHGLWS
        +PA      A T + SS                   G ++D ++LLNMPNLL+DMA G+L+SPPR+KSPS+ D+SP++S  D GLWS
Subjt:  TPAIPMDPLAATDQASS-----------------SGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS--DHGLWS

A0A5A7SRR8 Ethylene-responsive transcription factor ERF0271.0e-4962.03Show/hide
Query:  PPAPHPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDP
        PP  H  FRG+RSRSGKWVSEIREPRK+TRIWLGTYPTP+MAAAAYDVAAL LKGP+ASLNFP SLLSY IP STS SDIRAAAA+AAA+R P    P  
Subjt:  PPAPHPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDP

Query:  TPAIPMDPLAATDQASS-----------------SGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS--DHGLWS
        +PA      A T + SS                   G ++D ++LLNMPNLL+DMA G+L+SPPR+KSPS+ D+SP++S  D GLWS
Subjt:  TPAIPMDPLAATDQASS-----------------SGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS--DHGLWS

A0A5D3DFB2 Ethylene-responsive transcription factor ERF0277.8e-5062.03Show/hide
Query:  PPAPHPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDP
        PP  H  FRG+RSRSGKWVSEIREPRK+TRIWLGTYPTP+MAAAAYDVAAL LKGP+ASLNFP SLLSY IP STS SDIRAAAA+AAA+R P    P  
Subjt:  PPAPHPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDP

Query:  TPAIPMDPLAATDQASSS-----------------GGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS--DHGLWS
        +PA      A T + SS                   G ++D ++LLNMPNLL+DMA G+L+SPPR+KSPS+ D+SP++S  D GLWS
Subjt:  TPAIPMDPLAATDQASSS-----------------GGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS--DHGLWS

A0A6J1FZR2 ethylene-responsive transcription factor ERF027-like2.7e-5069.01Show/hide
Query:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI
        HP+FRGVRSRSGKWVSEIR+PR++TRIWLGTYPTPDMAAAAYDVAALALKGP ASLNFPD+LLSY IPSSTS SDIRAAAA+AAA+R  P   P P PA 
Subjt:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI

Query:  PMDPLAATDQASSSGGA------YMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS
           P+     +S +  A      ++D ++LLNMPNLL+DMA G+L+SPPRIKS S SDDSP+NS   GLWS
Subjt:  PMDPLAATDQASSSGGA------YMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS

A0A6J1HW14 ethylene-responsive transcription factor ERF027-like1.7e-5270.52Show/hide
Query:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI
        HP+FRGVRSRSGKWVSEIR+PR++TRIWLGTYPTPDMAAAAYDVAALALKGP ASLNFPDSLLSYHIPSSTS SDIRAAAA+AAA+R  P   P P PA 
Subjt:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI

Query:  PMDPL--------AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS
           P+        A    A++S G ++D ++LLNMPNLL+DMA G+L+SPPRIKS S SDDSP+NS   GLWS
Subjt:  PMDPL--------AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLWS

SwissProt top hitse value%identityAlignment
P93835 Dehydration-responsive element-binding protein 1B1.8e-2748.52Show/hide
Query:  HPRFRGVRSR-SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAA-ASRCPPPDHPDPTP
        HP +RGVR R SGKWVSE+REP K TRIWLGT+ T +MAA A+DVAALAL+G  A LNF DS     IP ST A DI+ AAA AA A +    D      
Subjt:  HPRFRGVRSR-SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAA-ASRCPPPDHPDPTP

Query:  AIPMDPL---AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNSDHGLWS
         + M+     A      S G  YMD + +  MP LL +MA G+LL PP ++   N  D   + D  LWS
Subjt:  AIPMDPL---AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNSDHGLWS

Q38Q39 Ethylene-responsive transcription factor ERF0275.6e-3754.02Show/hide
Query:  PRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASR-CPPPDH-------
        P +RG+R RSGKWVSEIREPRK+TRIWLGTYP  +MAAAAYDVAA+ALKG  A LNFP S+ SY +P STSA+DIRAAAA AAA + C   +        
Subjt:  PRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASR-CPPPDH-------

Query:  -PDPTPAIPMDPLAATDQASSS--GGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLW
            + +   +     D  SSS  G  +MD +++LNMPNLL +MA G++++PP       SDDSP NS D  LW
Subjt:  -PDPTPAIPMDPLAATDQASSS--GGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLW

Q9CAN9 Ethylene-responsive transcription factor ERF0262.7e-3957.74Show/hide
Query:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI
        +P +RG+R RSGKWVSEIREP+K+TR+WLGTYPTP+MAAAAYDVAALALKG    LNFPDSL SY IP S+SA+ IR AAA AAA+R           A+
Subjt:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI

Query:  PMDPL---AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNSD-HGLWS
         +         D A SS   ++D ++LLNMP LL DMA G++++PP + SP  SDDSP NSD   LWS
Subjt:  PMDPL---AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNSD-HGLWS

Q9FJ90 Ethylene-responsive transcription factor ERF0259.5e-3754.71Show/hide
Query:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI
        H  FRG+R R+GKWVSEIREPRK+TRIWLGTYP P+MAAAAYDVAALALKGP A LNFP   L+Y  P S SA+DIRAAA+ AA  +  P    D     
Subjt:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI

Query:  PMDPLAATD----QASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIK-SPSNSDDSPSNSD-HGLWS
        P+ P    +      +S    +MD + +LNMP LL +MA G+L+SPPR+   P+  DDSP N +   LWS
Subjt:  PMDPLAATD----QASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIK-SPSNSDDSPSNSD-HGLWS

Q9SJR0 Ethylene-responsive transcription factor ERF0245.0e-3048.9Show/hide
Query:  HPRFRGVRSR--SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTP
        HP +RGVR R  S KWVSEIREPRK  RIWLGT+ TP+MAA AYDVAALALKG  A LNFP+S+ S   P+S S +DI+AAAA AAA+     D      
Subjt:  HPRFRGVRSR--SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTP

Query:  AIPMDPLAATDQASSSGGA-------------YMDVDDLLNMPNLLLDMAGGLLLSPPR---IKSPSNSDDSPSNSDHGLWS
        AI M    A + + +SG A             +MD D + +MPN+L++MA G+LLSPPR     +  ++D  P   D+ LW+
Subjt:  AIPMDPLAATDQASSSGGA-------------YMDVDDLLNMPNLLLDMAGGLLLSPPR---IKSPSNSDDSPSNSDHGLWS

Arabidopsis top hitse value%identityAlignment
AT1G12630.1 Integrase-type DNA-binding superfamily protein4.0e-3854.02Show/hide
Query:  PRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASR-CPPPDH-------
        P +RG+R RSGKWVSEIREPRK+TRIWLGTYP  +MAAAAYDVAA+ALKG  A LNFP S+ SY +P STSA+DIRAAAA AAA + C   +        
Subjt:  PRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASR-CPPPDH-------

Query:  -PDPTPAIPMDPLAATDQASSS--GGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLW
            + +   +     D  SSS  G  +MD +++LNMPNLL +MA G++++PP       SDDSP NS D  LW
Subjt:  -PDPTPAIPMDPLAATDQASSS--GGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNS-DHGLW

AT2G36450.1 Integrase-type DNA-binding superfamily protein3.6e-3148.9Show/hide
Query:  HPRFRGVRSR--SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTP
        HP +RGVR R  S KWVSEIREPRK  RIWLGT+ TP+MAA AYDVAALALKG  A LNFP+S+ S   P+S S +DI+AAAA AAA+     D      
Subjt:  HPRFRGVRSR--SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTP

Query:  AIPMDPLAATDQASSSGGA-------------YMDVDDLLNMPNLLLDMAGGLLLSPPR---IKSPSNSDDSPSNSDHGLWS
        AI M    A + + +SG A             +MD D + +MPN+L++MA G+LLSPPR     +  ++D  P   D+ LW+
Subjt:  AIPMDPLAATDQASSSGGA-------------YMDVDDLLNMPNLLLDMAGGLLLSPPR---IKSPSNSDDSPSNSDHGLWS

AT4G25480.1 dehydration response element B1A2.7e-2645.29Show/hide
Query:  HPRFRGVRSR-SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAAS----RC-PPPDHP
        HP +RGVR R SGKWV E+REP K TRIWLGT+ T +MAA A+DVAALAL+G  A LNF DS     IP ST A DI+ AAA AA +     C    DH 
Subjt:  HPRFRGVRSR-SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAAS----RC-PPPDHP

Query:  DPTPAIPMDPLAATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNSDHGLWS
               ++ +   +Q  S    YM  + +  MP+LL +MA G+LL  P ++   N +    + D  LWS
Subjt:  DPTPAIPMDPLAATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNSDHGLWS

AT4G25490.1 C-repeat/DRE binding factor 11.3e-2848.52Show/hide
Query:  HPRFRGVRSR-SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAA-ASRCPPPDHPDPTP
        HP +RGVR R SGKWVSE+REP K TRIWLGT+ T +MAA A+DVAALAL+G  A LNF DS     IP ST A DI+ AAA AA A +    D      
Subjt:  HPRFRGVRSR-SGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAA-ASRCPPPDHPDPTP

Query:  AIPMDPL---AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNSDHGLWS
         + M+     A      S G  YMD + +  MP LL +MA G+LL PP ++   N  D   + D  LWS
Subjt:  AIPMDPL---AATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNSDHGLWS

AT5G52020.1 Integrase-type DNA-binding superfamily protein6.8e-3854.71Show/hide
Query:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI
        H  FRG+R R+GKWVSEIREPRK+TRIWLGTYP P+MAAAAYDVAALALKGP A LNFP   L+Y  P S SA+DIRAAA+ AA  +  P    D     
Subjt:  HPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASRCPPPDHPDPTPAI

Query:  PMDPLAATD----QASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIK-SPSNSDDSPSNSD-HGLWS
        P+ P    +      +S    +MD + +LNMP LL +MA G+L+SPPR+   P+  DDSP N +   LWS
Subjt:  PMDPLAATD----QASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIK-SPSNSDDSPSNSD-HGLWS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTTCCGTTTTTAATTCCTCCATGTCCCAACGCCGTCCTACTTCCACTCCCCCCGCCCGCCCCCCACCCCCGCTTCCGTGGCGTCCGCAGCCGCAGCGGCAAATG
GGTCTCCGAAATCCGCGAGCCCCGCAAGAGCACCCGCATTTGGCTCGGCACCTACCCCACCCCCGACATGGCTGCCGCCGCCTACGATGTCGCTGCCCTCGCCCTCAAAG
GCCCCCATGCTTCTCTCAACTTCCCCGACTCTCTTCTTTCCTATCACATTCCTTCCTCCACTTCCGCCTCTGATATTCGCGCTGCCGCTGCCGTCGCTGCCGCTTCCCGA
TGCCCTCCACCCGACCATCCTGATCCTACGCCTGCAATTCCGATGGACCCACTCGCTGCCACGGACCAGGCCAGTTCCTCCGGGGGTGCCTACATGGATGTTGATGACTT
GCTTAACATGCCCAATTTACTGCTGGACATGGCTGGGGGCTTGCTCCTCAGCCCCCCACGCATCAAGTCGCCCTCCAATTCCGATGACTCTCCTTCCAACTCCGACCATG
GATTATGGAGTAGTTACTCCTAA
mRNA sequenceShow/hide mRNA sequence
CTAATAGCGAATTTCACAAAGATGGAGATAGAGAATGCATTCAACGTCCCCATGTCATCCCCGGGATGAAGATGTGTAGATATATATATTTGTGAAGTTAGTTGACACAC
GTGGTTGAGTTGCAAAAAGGGGGAAATGGATGATGTATAAGGAATTTTGATAGAAGTAAAGTAATGAAGCACAGAAAACAGGTAGGTGCCAGGTTGTAATTAAACATACG
CGTAGGCTGTGTAAGCTTCACTCACACACACACACACACAGTCATTTCAAATGCCCCCCCAACGCCAACGCCAACGCCAATAGCCGCTTCAACCAAAACTGTTTTTTCTG
TTTTAATCCGCGAATCCCCCACGCCTTTTACCACTCATCCCCTTCCCTTTATATCCTCATCTCCAAATTCATATCCACATGCCTTTTCCGTTTTTAATTCCTCCATGTCC
CAACGCCGTCCTACTTCCACTCCCCCCGCCCGCCCCCCACCCCCGCTTCCGTGGCGTCCGCAGCCGCAGCGGCAAATGGGTCTCCGAAATCCGCGAGCCCCGCAAGAGCA
CCCGCATTTGGCTCGGCACCTACCCCACCCCCGACATGGCTGCCGCCGCCTACGATGTCGCTGCCCTCGCCCTCAAAGGCCCCCATGCTTCTCTCAACTTCCCCGACTCT
CTTCTTTCCTATCACATTCCTTCCTCCACTTCCGCCTCTGATATTCGCGCTGCCGCTGCCGTCGCTGCCGCTTCCCGATGCCCTCCACCCGACCATCCTGATCCTACGCC
TGCAATTCCGATGGACCCACTCGCTGCCACGGACCAGGCCAGTTCCTCCGGGGGTGCCTACATGGATGTTGATGACTTGCTTAACATGCCCAATTTACTGCTGGACATGG
CTGGGGGCTTGCTCCTCAGCCCCCCACGCATCAAGTCGCCCTCCAATTCCGATGACTCTCCTTCCAACTCCGACCATGGATTATGGAGTAGTTACTCCTAATCCTAATCA
TCAATCAATCATTAAATTAAATAAATAAATCATGATCCTTCTCTGGCAGTTGTGTGTGTGTGTGTGTTTTTAGAGAAATGTTTTATGTAATTATTGGAGCCCATAGTCCT
CCATTGCTGAGCTGCTAGCAGTTAATGGAACTTCACTCCAAACCTGTCGCATTCCAATCACATATATATATATATATATATATTTCCTCTAAAAATTTCCCATTTGTCAT
CTTCCTCCAATCATGTCTCTTTTTCCCTTTTCTACCTCAAAATATTCCATTATCATAAATTCACCCCTTTTTATCATAATTCAAAAATGTCCCTATCTCATATCACTTAT
AGTTTCTCCTTATACTTACACTTACCTATATTTAACAATTCTTGTTTTCAACTATATATATATATATACACATTAGATAGTATATGGGATTTCATGTTAAAAATAATTAC
ATGTTAATTAGGAATTATCCTTGTATGTTATTTTTAATATAATAGGTATTTGACATTTGAAGCAAAAAAATTCATGATACGACTGTTAAACTATACTCACTTTTACCGCT
AGGGTTAGAAGTGTGTATGTATATTATGGATCTTTCCCTATTTTAGTTTATGTCAGACATTATTGTTTCCCATCTCCATTATTTTTACCCTTGTCATTTTTCTCTTTCTT
CTTCTATTCTCACCCTTCCGGTCAAAAACTCATGTTCCCAA
Protein sequenceShow/hide protein sequence
MPFPFLIPPCPNAVLLPLPPPAPHPRFRGVRSRSGKWVSEIREPRKSTRIWLGTYPTPDMAAAAYDVAALALKGPHASLNFPDSLLSYHIPSSTSASDIRAAAAVAAASR
CPPPDHPDPTPAIPMDPLAATDQASSSGGAYMDVDDLLNMPNLLLDMAGGLLLSPPRIKSPSNSDDSPSNSDHGLWSSYS