; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010349 (gene) of Chayote v1 genome

Gene IDSed0010349
OrganismSechium edule (Chayote v1)
Description30S ribosomal protein S1
Genome locationLG02:47563476..47570002
RNA-Seq ExpressionSed0010349
SyntenySed0010349
Gene Ontology termsGO:0000481 - maturation of 5S rRNA (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0034337 - RNA folding (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR003029 - S1 domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582039.1 30S ribosomal protein S1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.7e-17887Show/hide
Query:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR
        MP+F A+TLGS+SAHSF+SL  STD+SHS SSS V  HK  SKR SNFAARVSLSGKPEP+AGVL++SPSSPESVRRARRSADWK AREYLDSGFI++GR
Subjt:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA
        IEGSNAGGLLVRF+S+VGFLPFP LSP+HSCKEP KSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFS++V VGD+YEARVGSVEDYGAF 
Subjt:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA

Query:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI
        HL  SDGLYHLTGL+H+SEVSWDLVQDVRDIL+EGDEVRVKVI+VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKS+ +IIPLPGL+TI
Subjt:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI

Query:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSL+QEGIKRALQRVLER
Subjt:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

KAG7018465.1 30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.0e-17686.21Show/hide
Query:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR
        MP+F A+TLGS+SAHSF+SL  S D+S+S S+S +L HK  SKR SNFAARVSLSGKPEP+AGVL++SPSSPESVRRARRSADWK AREYLDSGFI++GR
Subjt:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA
        IEGSNAGGLLVRF+S+VGFLPFP LSP+HSCKEP KSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFS++V VGD+YEARVGSVEDYGAF 
Subjt:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA

Query:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI
        HL  SDGLYHLTGL+H+SEVSWDLVQDVRDIL+EGDEVRVKVI+VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKS+ +IIPLPGL+TI
Subjt:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI

Query:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSL+QEGIKRALQRVLER
Subjt:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

XP_022979820.1 uncharacterized protein LOC111479406 [Cucurbita maxima]1.6e-17887Show/hide
Query:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR
        MP+F A+TLGS+SAHSF+SL  STD+SHS SSS VL HK  SKR SNFAARVSLSGKPEP+AGVL++SPSSPESVRRARRSADWK AREYLDSGFI++GR
Subjt:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA
        IEGSNAGGLLVRF+S+VGFLPFP LSP+HSCKEP KSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFS+QV VGD+YEARVGSVEDYGAF 
Subjt:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA

Query:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI
        HL  SDG YHLTGL+H+SEVSWDLVQDVRDIL+EGDEVRVKV++VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKS+ +IIPLPGL+TI
Subjt:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI

Query:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSL+QEGIKRALQRVLER
Subjt:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

XP_023526022.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111789621 [Cucurbita pepo subsp. pepo]1.5e-17686.21Show/hide
Query:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR
        MP+F A+TLGS+SAHSF++L  STD+S+S S+S  L HK  SKR SNFAARVSLSGKP+P+AGVL++SPSSPESVRRARRSADWK AREYLDSGFI++GR
Subjt:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA
        IEGSNAGGLLVRF+S+VGFLPFP LSP+HSCKEP KSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFS+QV VGD+YEARVGSVEDYGAF 
Subjt:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA

Query:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI
        HL  SDGLYHLTGL+H+SEVSWDLVQDVRDIL+EGDEVRVKVI+VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKS+ +IIPLPGL+TI
Subjt:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI

Query:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSL+QEGIKRALQRVLER
Subjt:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

XP_038897871.1 30S ribosomal protein S1 homolog B [Benincasa hispida]7.3e-17987.2Show/hide
Query:  MPVFASTLGSVSAHSFISLFGSTDSSHSPSSSVLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGRIE
        MP+FA+TLGSV AHSF+SL  ST    S +S +L  K  SKR SNF ARVSLSGKP+P+AGVLDTSPSSPES+RRARRSADWKAAREYLD+GFIYEGRIE
Subjt:  MPVFASTLGSVSAHSFISLFGSTDSSHSPSSSVLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGRIE

Query:  GSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFAHL
        GSNAGGLLVRF+S++GFLPFPQLSPSHSCKEP KSIQDIAKSLIGSLI VKVIQADERNKKLIFSEKEAAWSKFS+QV VGD+YEARVGSVEDYGAF HL
Subjt:  GSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFAHL

Query:  CLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETIFE
          SDGLYHLTGL+HVSEVSWDLVQDVRDIL+EGDEV VKVINVDR+KSRITLSIKQLEEDPLLETLDKVIPQ GSAEPDSFGPKS+ +I+PLPGLETI E
Subjt:  CLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETIFE

Query:  ELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        ELLQEDGI D+CVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSL+QEGIKRALQRVLER
Subjt:  ELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

TrEMBL top hitse value%identityAlignment
A0A0A0KTX2 Uncharacterized protein8.2e-16883.38Show/hide
Query:  MPVFASTLGSVSAHSFISLFGSTDSSHSPSSS----VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYE
        MP+F +T+ SVSAHSF+SL  ST  + S SSS    +L  K  SKR+S F +RVSLSGKP+P+AGVLDT   SPESVRRARRSADWKAAREYLDSGFIYE
Subjt:  MPVFASTLGSVSAHSFISLFGSTDSSHSPSSS----VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYE

Query:  GRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGA
        GRIEGSNAGGLLVRF+S+VGFLPFPQLSPSHSCKEP KSIQDIAKSLIGSLI VKVIQADE+N+KLIFSEKEAA SKFS QV+VGD+YE +VGSVEDYGA
Subjt:  GRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGA

Query:  FAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLE
        F HL LSDGLYHLTGL+HVSEVSWDLVQDVRDIL+EGDEV VKVINV++ KSRITLSI+QLEEDPLLETLDKVIPQ+ SAEPDSFGPK + +IIPLPGLE
Subjt:  FAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLE

Query:  TIFEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        TI EELLQE+GI DV VNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSL+QEGIKRALQRVLER
Subjt:  TIFEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

A0A1S3BXL4 30S ribosomal protein S1 isoform X11.6e-16883.38Show/hide
Query:  MPVFASTLGSVSAHSFISLFGST----DSSHSPSSSVLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYE
        MP+F +T+ SVS HSF+SL  ST     +S S SSS+L  K  SKR S F +RVSLSGKP+P+AGVLDT   SPESVRRARRSADWKAAREYLDSGFIYE
Subjt:  MPVFASTLGSVSAHSFISLFGST----DSSHSPSSSVLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYE

Query:  GRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGA
        GRIEGSNAGGLLVRF+S++GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLI VKVIQADERNKKLIFSEKEA WSKFS QV VGD+YEA+VGS+EDYGA
Subjt:  GRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGA

Query:  FAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLE
        F HL  SDGLYHLTGL+HVSEVSWDLVQDVRDIL+EGDEV VKVINVDR+KSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKS+ +IIPLPGL 
Subjt:  FAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLE

Query:  TIFEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        TI EEL QE+GI DV VNRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQLTTSL+QEGIKRALQRVLER
Subjt:  TIFEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

A0A6J1CUJ6 uncharacterized protein LOC1110147146.1e-17184.08Show/hide
Query:  MPVFASTLGSVSAHSFISLFGSTDSSHSPSSSVL-NHKFHSKRASNFAARVSLSGKPEPVAGVLD-TSPSSPESVRRARRSADWKAAREYLDSGFIYEGR
        MP+  +TLGS+S +SF+S F STDS  SPSS +  NH   SKR+ NF  R+SL   P+P+AGVLD TSP+SPES+ R+RRS DWKAAREYLDSGFIYEGR
Subjt:  MPVFASTLGSVSAHSFISLFGSTDSSHSPSSSVL-NHKFHSKRASNFAARVSLSGKPEPVAGVLD-TSPSSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA
        IEGSNAGGLLVRF S+VGFLPFPQLSPSHSCKEP KSIQDIAKSL+GS++PVK+IQADERNKKLIFSEKEAAWSKFS+QVSVG++Y+ARVGSVEDYGAF 
Subjt:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA

Query:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI
        HL  SDGLYHLTGL+HVSEVSWDLVQDVRDIL+EGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGP+S+ +IIPLPGLETI
Subjt:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI

Query:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        FEELLQEDGIEDV VNRQGFEKRVVSQDLQLWLSNAPPVEKKF LLARAGRQVQEIQLTTSL+QEGIK ALQ VLER
Subjt:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

A0A6J1GVD7 LOW QUALITY PROTEIN: uncharacterized protein LOC1114575272.1e-17685.94Show/hide
Query:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR
        MP+F A+TLGS+SAHSF+SL  S D+S+S S+S +L HK  SKR SNFAARVSLSGKPEP+AGVL++SPSSPESVRRARRSADWK AREYLDSGFI++GR
Subjt:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA
        IEGSNAGGLLVRF+S+VGFLPFP LSP+HSCKEP KSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFS++V VGD+YEARVGS+EDYGAF 
Subjt:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA

Query:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI
        HL  SDGLYHLTGL+H+SEVSWDLVQDVRDIL+EGDEVRVKVI+VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKS+ +IIPLPGL+TI
Subjt:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI

Query:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSL+QEGIKRALQRVLER
Subjt:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

A0A6J1IUF3 uncharacterized protein LOC1114794067.9e-17987Show/hide
Query:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR
        MP+F A+TLGS+SAHSF+SL  STD+SHS SSS VL HK  SKR SNFAARVSLSGKPEP+AGVL++SPSSPESVRRARRSADWK AREYLDSGFI++GR
Subjt:  MPVF-ASTLGSVSAHSFISLFGSTDSSHSPSSS-VLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGR

Query:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA
        IEGSNAGGLLVRF+S+VGFLPFP LSP+HSCKEP KSIQDIAKSLIGSLIPVKVIQADE+NK LIFSEKEAAWSKFS+QV VGD+YEARVGSVEDYGAF 
Subjt:  IEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFA

Query:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI
        HL  SDG YHLTGL+H+SEVSWDLVQDVRDIL+EGDEVRVKV++VDR+KSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKS+ +IIPLPGL+TI
Subjt:  HLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETI

Query:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        FEELLQE+GIEDV +NRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSL+QEGIKRALQRVLER
Subjt:  FEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

SwissProt top hitse value%identityAlignment
P29344 30S ribosomal protein S1, chloroplastic3.8e-2130.53Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAW
        S+R+ +    W+  R+      + +G+I G+N GG++     + GF+PF Q+S   S +E           L+   IP+K ++ DE   +L+ S ++ A 
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAW

Query:  SKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDP
        +    Q+ +G +    V S++ YGAF        +  + GL+HVS++S D V D+  +L  GD ++V +++ DRE+ R++LS K+LE  P
Subjt:  SKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDP

P46228 30S ribosomal protein S12.1e-1929.47Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAW
        S+RR      W+  R+           +  +N GG LVR   + GF+P   +S +   KE           L+G  +P+K ++ DE   +L+ S + A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAW

Query:  SKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDP
         +  +++ VG++    V  ++ YGAF        +  ++GL+H+SE+S D ++    +    DEV+V +I++D E+ RI+LS KQLE +P
Subjt:  SKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDP

P73530 30S ribosomal protein S1 homolog A1.1e-1727.37Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAW
        S+RR      W+  R+           +  +N GG LVR   + GF+P   +           S ++  + L+G  +P+K ++ DE   +L+ S + A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAW

Query:  SKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDP
         +  + + V  +    V  ++ YGAF        +  ++GL+H+SE+S D +     +    DE++V +I++D E+ RI+LS KQLE +P
Subjt:  SKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDP

Q93VC7 30S ribosomal protein S1, chloroplastic1.6e-1929.06Show/hide
Query:  VAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADER
        + G  ++  S   S+R  +    W+  R+      I + ++ G+N GGL+     + GF+PF Q+S   + +E           L+   IP+K ++ DE 
Subjt:  VAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADER

Query:  NKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLE
          KL+ S ++A  +    Q+ +G +    V S++ YGAF        +  + GL+HVS++S D V D+  +L  GD ++V +++ DR++ R++LS K+LE
Subjt:  NKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLE

Query:  EDP
          P
Subjt:  EDP

Q9JZ44 30S ribosomal protein S18.8e-1830.96Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAW
        S  +A+R+ADW A  E +++G I  G I G   GGL V   SI  FLP   +          + ++D      G  I  KVI+ D++   ++ S +    
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAW

Query:  SKFSDQ-------VSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDP
        +   ++       +  G + +  V ++ DYGAF  L   D      GL+H+++++W  V+   ++L  G EV  KV+  D+EK R++L +KQL EDP
Subjt:  SKFSDQ-------VSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDP

Arabidopsis top hitse value%identityAlignment
AT1G12800.1 Nucleic acid-binding, OB-fold-like protein5.7e-2031.05Show/hide
Query:  QDIAKSLIGSLIPVKVIQADERNKKLIFS----EKEAAWSK---FSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDI
        Q    S +G  I V V+ A+  ++KLIFS    E E    K      ++ VGD+ +  +  +  +G F   C  +G   +  L+H SEVSWD   D    
Subjt:  QDIAKSLIGSLIPVKVIQADERNKKLIFS----EKEAAWSK---FSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDI

Query:  LTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPL--PGLETIFEELLQEDGIEDVCVNRQGFEKRVVSQDL
           G  V  KV  +D    RI LS+K++  DPL E L+ V+  D     D  G +     +    P +E++ +EL   +GI+ V  +R  F    ++   
Subjt:  LTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPL--PGLETIFEELLQEDGIEDVCVNRQGFEKRVVSQDL

Query:  QLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
        Q+++  AP  E ++ LLARAG +VQE+ +  SL++E +K  +     R
Subjt:  QLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

AT3G11964.1 RNA binding;RNA binding2.5e-0727.07Show/hide
Query:  KEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEA-------AWSKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDL
        KEP+K         +G L+  +V+  +  +K++  + K         + S    ++ VGD+   R+  VE +G F  +  +     + GL H+S++S D 
Subjt:  KEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEA-------AWSKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDL

Query:  VQDVRDILTEGDEVRVKVINVDREKSRITLSIK
        +++V+     G+ VR K++ +D EK RI+L +K
Subjt:  VQDVRDILTEGDEVRVKVINVDREKSRITLSIK

AT3G23700.1 Nucleic acid-binding proteins superfamily7.7e-11860.77Show/hide
Query:  MPVF--ASTLGSVSAHS--------FIS-----LFGSTDSSHSPSSSVLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAA
        M VF  A+TLGSVS  S        F+S     L  S+ SS + +S V   K  S  A+    R S       V    ++          A   +DWK A
Subjt:  MPVF--ASTLGSVSAHS--------FIS-----LFGSTDSSHSPSSSVLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAA

Query:  REYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYE
        + Y  SG  +EG ++G N GGLL+RF S+VGFLP+PQLSPS SCKEPQKSI +IAK+L+GS +PVKV+QADE N+KLI SEK A W K+S  V+VGD++ 
Subjt:  REYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYE

Query:  ARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKS
         RVGSVEDYGAF HL   DGLYHLTGL+HVSEVSWD VQDVRD+L +GDEVRV V N+D+EKSRITLSIKQLE+DPLLETLDKVI +D S    S    +
Subjt:  ARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKS

Query:  NGDIIPLPGLETIFEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER
           I PLPGLETI EELL+EDGIE V +NRQGFEKRVVSQDLQLWLSN PP + KF LLARAGRQVQEI LTTSL Q GIK+ALQ VLER
Subjt:  NGDIIPLPGLETIFEELLQEDGIEDVCVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLER

AT4G29060.1 elongation factor Ts family protein2.5e-0727.78Show/hide
Query:  SDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDG
        ++++  G  +  +V +++ +GAF      D      GL+HVS++S + V+DV  ++T G EV+V+++  D E  RI+L++++ ++ P  ++     P+ G
Subjt:  SDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDG

Query:  SAEPDSFG
             S G
Subjt:  SAEPDSFG

AT5G30510.1 ribosomal protein S11.1e-2029.06Show/hide
Query:  VAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADER
        + G  ++  S   S+R  +    W+  R+      I + ++ G+N GGL+     + GF+PF Q+S   + +E           L+   IP+K ++ DE 
Subjt:  VAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADER

Query:  NKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLE
          KL+ S ++A  +    Q+ +G +    V S++ YGAF        +  + GL+HVS++S D V D+  +L  GD ++V +++ DR++ R++LS K+LE
Subjt:  NKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSWDLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLE

Query:  EDP
          P
Subjt:  EDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGTCTTTGCTTCAACGCTCGGATCTGTCTCTGCACATTCCTTCATCTCCCTGTTCGGCTCCACCGATTCTTCTCACTCCCCTTCAAGTTCAGTTTTGAACCACAA
ATTTCACTCTAAACGCGCCTCCAACTTCGCCGCTAGGGTTTCCCTTTCCGGTAAACCGGAGCCCGTTGCCGGAGTTCTCGACACTTCGCCTTCCTCGCCGGAATCGGTTC
GACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATTTACGAGGGTAGGATTGAAGGTTCAAATGCTGGAGGTTTACTTGTCCGA
TTTTTTTCTATTGTGGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGAACCACAAAAGAGTATCCAAGATATTGCAAAAAGCTTAATTGGTTCGCT
TATACCAGTGAAGGTTATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCCTGGTCAAAGTTTTCTGATCAAGTTAGTGTGGGAGATATTT
ATGAAGCTAGAGTTGGCTCTGTGGAGGATTATGGTGCCTTTGCACACTTATGTTTATCTGATGGTCTTTATCATCTTACTGGGCTAATACATGTATCAGAAGTTTCATGG
GATCTAGTTCAGGATGTAAGAGACATCTTAACCGAGGGTGACGAAGTGAGGGTGAAAGTCATTAATGTTGATAGGGAAAAGTCCAGGATCACACTGTCGATTAAACAGCT
CGAGGAAGATCCACTTTTGGAGACATTGGATAAAGTCATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTCGGACCTAAAAGCAACGGTGACATTATACCACTTCCTG
GACTTGAAACAATATTTGAAGAGCTACTGCAGGAAGATGGTATAGAAGATGTTTGTGTGAACCGACAAGGATTTGAGAAGCGGGTGGTGTCACAAGACCTACAACTTTGG
CTATCAAATGCACCTCCGGTCGAAAAGAAGTTCACTCTCCTTGCTCGAGCCGGGAGGCAGGTCCAAGAAATACAACTGACAACATCACTCAATCAGGAAGGTATAAAAAG
GGCATTGCAACGAGTATTGGAACGTGGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGTCTTTGCTTCAACGCTCGGATCTGTCTCTGCACATTCCTTCATCTCCCTGTTCGGCTCCACCGATTCTTCTCACTCCCCTTCAAGTTCAGTTTTGAACCACAA
ATTTCACTCTAAACGCGCCTCCAACTTCGCCGCTAGGGTTTCCCTTTCCGGTAAACCGGAGCCCGTTGCCGGAGTTCTCGACACTTCGCCTTCCTCGCCGGAATCGGTTC
GACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATTTACGAGGGTAGGATTGAAGGTTCAAATGCTGGAGGTTTACTTGTCCGA
TTTTTTTCTATTGTGGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGAACCACAAAAGAGTATCCAAGATATTGCAAAAAGCTTAATTGGTTCGCT
TATACCAGTGAAGGTTATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCCTGGTCAAAGTTTTCTGATCAAGTTAGTGTGGGAGATATTT
ATGAAGCTAGAGTTGGCTCTGTGGAGGATTATGGTGCCTTTGCACACTTATGTTTATCTGATGGTCTTTATCATCTTACTGGGCTAATACATGTATCAGAAGTTTCATGG
GATCTAGTTCAGGATGTAAGAGACATCTTAACCGAGGGTGACGAAGTGAGGGTGAAAGTCATTAATGTTGATAGGGAAAAGTCCAGGATCACACTGTCGATTAAACAGCT
CGAGGAAGATCCACTTTTGGAGACATTGGATAAAGTCATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTCGGACCTAAAAGCAACGGTGACATTATACCACTTCCTG
GACTTGAAACAATATTTGAAGAGCTACTGCAGGAAGATGGTATAGAAGATGTTTGTGTGAACCGACAAGGATTTGAGAAGCGGGTGGTGTCACAAGACCTACAACTTTGG
CTATCAAATGCACCTCCGGTCGAAAAGAAGTTCACTCTCCTTGCTCGAGCCGGGAGGCAGGTCCAAGAAATACAACTGACAACATCACTCAATCAGGAAGGTATAAAAAG
GGCATTGCAACGAGTATTGGAACGTGGTGCATGA
Protein sequenceShow/hide protein sequence
MPVFASTLGSVSAHSFISLFGSTDSSHSPSSSVLNHKFHSKRASNFAARVSLSGKPEPVAGVLDTSPSSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVR
FFSIVGFLPFPQLSPSHSCKEPQKSIQDIAKSLIGSLIPVKVIQADERNKKLIFSEKEAAWSKFSDQVSVGDIYEARVGSVEDYGAFAHLCLSDGLYHLTGLIHVSEVSW
DLVQDVRDILTEGDEVRVKVINVDREKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSNGDIIPLPGLETIFEELLQEDGIEDVCVNRQGFEKRVVSQDLQLW
LSNAPPVEKKFTLLARAGRQVQEIQLTTSLNQEGIKRALQRVLERGA