CuGenDBv2

Gene ID	Sed0010353
Organism	Sechium edule (Chayote v1)
Description	Photosystem II D2 protein
Genome location	Contig00297:160440..161451
RNA-Seq Expression	Sed0010353
Synteny	Sed0010353
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0010242 - oxygen evolving activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR000484 - Photosynthetic reaction centre, L/M IPR036854 - Photosystem II protein D1/D2 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AJE75080.1 photosystem II protein D2 [Tragopogon dubius]

1.0e-159

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

YP_001936512.1 photosystem II protein D2 [Fagopyrum esculentum subsp. ancestrale]

1.0e-159

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

YP_006503786.1 photosystem II protein D2 [Datura stramonium]

1.0e-159

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

YP_009354541.1 photosystem II protein D2 [Echinacea paradoxa]

1.0e-159

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

YP_009447530.1 photosystem II protein D2 [Cucurbita moschata]

1.0e-159

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

TrEMBL top hits

e value

%identity

Alignment

A0A172W3U6 Photosystem II D2 protein

4.9e-160

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

A0A1U9YE55 Photosystem II D2 protein

4.9e-160

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

A0A218KG45 Photosystem II D2 protein

4.9e-160

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

A0A7H1KFL8 Photosystem II D2 protein

4.9e-160

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

D3WBR2 Photosystem II D2 protein

4.9e-160

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

SwissProt top hits

e value

%identity

Alignment

B5LMM1 Photosystem II D2 protein

1.3e-162

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

P69685 Photosystem II D2 protein

1.3e-162

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Q0G9W7 Photosystem II D2 protein

1.3e-162

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Q4VZN8 Photosystem II D2 protein

1.3e-162

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Q8S8X8 Photosystem II D2 protein

1.3e-162

86.94

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00020.1 photosystem II reaction center protein A

5.4e-18

27.14

Show/hide

Query:  VFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGG-------------
        +++G W G+L+ P    A   +             G+    + S L G N ++ A+   + ++      +W          W   GG             
Subjt:  VFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGG-------------

Query:  --FMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQ-----------SGWF----------------FAPSFVAGVLGAALLCAIHGATVENT
          +M R++EL+  + + RP+ A+A+S P+A   +VFLIYP+GQ           SG F                F    VAGV G +L  A+HG+ V ++
Subjt:  --FMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQ-----------SGWF----------------FAPSFVAGVLGAALLCAIHGATVENT

Query:  LF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF
        L  E  +  +    +   Q EETY++V A+ ++ ++     +F+N R LHFF+   PV G+W +ALG+  +A NL  ++F
Subjt:  LF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF

ATCG00270.1 photosystem II reaction center protein D

2.1e-163

86.65

Show/hide

Query:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------
        MDDWLRRDRFVFVG WSGLLLFPCAYFA+GGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG        
Subjt:  MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLG--------

Query:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG
               GFMLRQFELARSVQL RPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF                           VAGVLGAALLCAIHG
Subjt:  -------GFMLRQFELARSVQLRRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSF---------------------------VAGVLGAALLCAIHG

Query:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
        ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY
Subjt:  ATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFY

Query:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
        TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL
Subjt:  TKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTTGCCGTAGGAGGTTGGTTTACAGGTACAAC
TTTTGTAACTTCATGGTATACCCATGGATTGGCAAGTTCCTATTTGGAAGGATGCAACTTCTTAACCGCCGCAGTTTCTACCCCTGCTAATAGTTTAGCACACTCTTTGT
TGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGGTGGTGTCAATTAGGTGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACGACCT
TATAATGCAATCGCATTCTCGGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGTTGCCGGTGT
ATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTCGAAAATACCTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTG
AAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACT
GGTTTATGGATGAGTGCTCTTGGAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATACGTGCAGCGGAAGATCCTGAATTTGAGACTTT
CTATACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCCCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACG
CTCTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDDWLRRDRFVFVGCWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGFMLRQFELARSVQLRRP
YNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVT
GLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Sed0010353 (gene) of Chayote v1 genome