; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010383 (gene) of Chayote v1 genome

Gene IDSed0010383
OrganismSechium edule (Chayote v1)
DescriptionRNA-binding protein pno1-like
Genome locationLG05:3128777..3131212
RNA-Seq ExpressionSed0010383
SyntenySed0010383
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042585.1 RNA-binding protein pno1-like [Cucumis melo var. makuwa]6.0e-11294.2Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSME+E VS+K + EV  +PPKPQF+PLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_004145908.1 RNA-binding protein pno1 [Cucumis sativus]7.1e-11394.64Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSME+E VS+K + E+  LPPKPQFDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_008437547.1 PREDICTED: RNA-binding protein pno1-like [Cucumis melo]6.0e-11294.2Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSME+E VS+K + EV  +PPKPQF+PLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022157181.1 RNA-binding protein pno1-like [Momordica charantia]2.4e-11395.09Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SME+EA+STKPI EV  LPPKPQFDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTR DTPDIS
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_038874451.1 RNA-binding protein pno1-like [Benincasa hispida]2.1e-11294.64Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SME+EAVS+K   EV  LPPKP+FDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTPIY+QMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A0A0KQC5 KH domain-containing protein3.4e-11394.64Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSME+E VS+K + E+  LPPKPQFDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A1S3AUA6 RNA-binding protein pno1-like2.9e-11294.2Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSME+E VS+K + EV  +PPKPQF+PLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A5D3C450 RNA-binding protein pno1-like2.9e-11294.2Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSME+E VS+K + EV  +PPKPQF+PLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1DX80 RNA-binding protein pno1-like1.2e-11395.09Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SME+EA+STKPI EV  LPPKPQFDPLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTR DTPDIS
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1K1S8 RNA-binding protein pno1-like3.8e-11294.64Show/hide
Query:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SME+EAV +K I EV  LPPKP F+PLKPHEMNDGRVQFRKVSVP HRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno16.7e-6661.22Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD
        +P F P+K  ++  G+ + RK+ VPSHRY+PLK+ WM+I+TP+ E +K+ IR NL +R VE++   +T DI  +QK ADFV AF+LGF+V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q29IG6 RNA-binding protein pno12.8e-6466.85Show/hide
Query:  QFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG
        + RKVSVP HRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q6VBQ6 RNA-binding protein PNO14.8e-6459.11Show/hide
Query:  EVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDA
        EV     +P F P+   ++  G  + RKV+VP+HRY+PLK+ W++I+TPI E +++ +R NLK R VE+KT  +T DI+ L K ADF+ AF+LGF V DA
Subjt:  EVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDA

Query:  IALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLA
        +AL+R+DEL++ESF++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R A
Subjt:  IALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLA

Query:  ERF
        ERF
Subjt:  ERF

Q6VEU3 RNA-binding protein PNO12.8e-6460.2Show/hide
Query:  SALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIA
        SA   +P F  L   ++  G  + RKV VPSHRY+PLK+ W++I+TPI E +++ +R NLK R+VE+KT  +T DI  L + ADFV AF+LGF V DA+A
Subjt:  SALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIA

Query:  LLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        L+R+DEL++E+F++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  LRAV  R AER
Subjt:  LLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Query:  F
        F
Subjt:  F

Q9VR89 RNA-binding protein pno12.0e-6565.24Show/hide
Query:  PHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE
        P +    R + RKVSVP HRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein1.3e-9379.81Show/hide
Query:  MEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFV
        ME+E  +   +     LPPKP F PLK HEM+DG+VQFRK++VP +RYSPLKKAW++IYTPIY+QMK+DIRMNLKARKVELKTRADTPDISNLQK ADFV
Subjt:  MEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFV

Query:  HAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV
        HAFMLGFD+ DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPAGKV
Subjt:  HAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV

Query:  YSKLRAVTARLAE
        YSKLR+V+ARL E
Subjt:  YSKLRAVTARLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTACTGAAGTCCCCGTTTCCATGGAAATTGAAGCAGTTTCAACTAAACCGATAGCTGAAGTCAGCGCCTTGCCGCCAAAACCACAGTTTGATCCTCTAAAGCC
ACATGAAATGAATGATGGCCGAGTTCAGTTCCGGAAGGTATCCGTTCCTTCACATCGCTATTCTCCTCTCAAGAAAGCATGGATGGAGATCTACACCCCTATATACGAGC
AGATGAAAATTGACATCCGTATGAACCTCAAGGCTCGCAAAGTTGAACTGAAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAAAAGTGTGCAGATTTTGTTCAT
GCCTTCATGCTGGGTTTTGACGTAATCGATGCCATCGCACTCTTACGCGTGGATGAGCTCTATGTAGAGTCTTTTGAGATTAAAGATGTTAAAACACTTCGAGGCGAGCA
TTTGTCCCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAAACAAAGTTTGCCATTGAAAATGCTACAAAGACAAGGATAGTTATTGCAGATACCAAGATTCACATAT
TAGGATCCTTTGCCAACATCAAGATTGCTAGAGATTCTCTGTGCAGTCTAATTTTAGGCTCCCCTGCTGGAAAAGTTTATTCAAAACTAAGAGCAGTTACAGCCAGATTG
GCAGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAATTAATAAGAATTTAATAAGAAAAATAAAATAAAAGAAAAAACGGTTGCCCTAATTTCAGTCCCGAAGCCGAAATTCTCCGTTCTTCTCTCTCAGATTCAATCCT
TCAGCTCCGAATCGCAGATATTCGATTCCACCATTGCACCGTCGCAGGGTGGAACTTAGCTCAATTCCATAATGCAGTCTACTGAAGTCCCCGTTTCCATGGAAATTGAA
GCAGTTTCAACTAAACCGATAGCTGAAGTCAGCGCCTTGCCGCCAAAACCACAGTTTGATCCTCTAAAGCCACATGAAATGAATGATGGCCGAGTTCAGTTCCGGAAGGT
ATCCGTTCCTTCACATCGCTATTCTCCTCTCAAGAAAGCATGGATGGAGATCTACACCCCTATATACGAGCAGATGAAAATTGACATCCGTATGAACCTCAAGGCTCGCA
AAGTTGAACTGAAAACCAGAGCAGACACACCTGACATCAGTAACTTGCAAAAGTGTGCAGATTTTGTTCATGCCTTCATGCTGGGTTTTGACGTAATCGATGCCATCGCA
CTCTTACGCGTGGATGAGCTCTATGTAGAGTCTTTTGAGATTAAAGATGTTAAAACACTTCGAGGCGAGCATTTGTCCCGTGCCATAGGCAGATTGTCTGGTAAAGCTGG
TAAAACAAAGTTTGCCATTGAAAATGCTACAAAGACAAGGATAGTTATTGCAGATACCAAGATTCACATATTAGGATCCTTTGCCAACATCAAGATTGCTAGAGATTCTC
TGTGCAGTCTAATTTTAGGCTCCCCTGCTGGAAAAGTTTATTCAAAACTAAGAGCAGTTACAGCCAGATTGGCAGAAAGGTTTTGATCTTTTATGATTTTTGCACGTTGG
TTATAGTATGAAGAGTGTAACTTAATGAAATTCTTGTGCACTAAAGTTTTGTCCTAGATACAATTATTAATCAATTTGTCTCCACAAAAATGGGTATGAGCTGATTGACA
TTTGCTGCTCTATTTTTTGGTAGTCTATATCACTATATCAGTATATTAATTGAGAAGTACCTTTGATATCTGTTTATATCCTGTTAAGATGTGTGTTTATCATTTTGCTT
CAAATTTTGAGCATAAGAGGACTTGAATTTCCACTCTCA
Protein sequenceShow/hide protein sequence
MQSTEVPVSMEIEAVSTKPIAEVSALPPKPQFDPLKPHEMNDGRVQFRKVSVPSHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH
AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARL
AERF