; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010388 (gene) of Chayote v1 genome

Gene IDSed0010388
OrganismSechium edule (Chayote v1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationLG05:7680801..7692275
RNA-Seq ExpressionSed0010388
SyntenySed0010388
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]7.1e-13094.42Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPS +PQYGKHGGS G+G RHGRDYH RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKR SDY+SRRNPDHESRP+KNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

XP_022943536.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita moschata]2.1e-12994.02Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+PS +PQYGKHGGS G+G RHGRDYH RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKR SDY+SRRNPDHESRP+KNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

XP_022943539.1 nuclear cap-binding protein subunit 2-like isoform X2 [Cucurbita moschata]6.7e-12894.02Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+PS +PQYGKHGGS G+G RHGRDYH RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKR SDY+SRRNPDHESRP KNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]1.4e-13094.42Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPS +PQYGKHGGS G+GHRHGRDYH RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKR SDY+SRRNPDHESRP+KNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

XP_022986368.1 nuclear cap-binding protein subunit 2-like isoform X2 [Cucurbita maxima]4.6e-12994.42Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPS +PQYGKHGGS G+GHRHGRDYH RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKR SDY+SRRNPDHESRP KNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

TrEMBL top hitse value%identityAlignment
A0A6J1FUM2 Nuclear cap-binding protein subunit 23.2e-12894.02Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+PS +PQYGKHGGS G+G RHGRDYH RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKR SDY+SRRNPDHESRP KNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

A0A6J1FX36 Nuclear cap-binding protein subunit 21.0e-12994.02Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+PS +PQYGKHGGS G+G RHGRDYH RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKR SDY+SRRNPDHESRP+KNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

A0A6J1I4R2 Nuclear cap-binding protein subunit 23.6e-12792.43Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHAL +STT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSMP  M Q+G HGGS GHG+RHGRDYH RKR+RD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKRNSD+ESRRN +HESRPEKNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 27.0e-13194.42Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPS +PQYGKHGGS G+GHRHGRDYH RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKR SDY+SRRNPDHESRP+KNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

A0A6J1JFW0 Nuclear cap-binding protein subunit 22.2e-12994.42Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE ALQTSTT+YVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPS +PQYGKHGGS G+GHRHGRDYH RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRD

Query:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH
        DDRHAHESSKR SDY+SRRNPDHESRP KNPRFRE GDSDEEDDDDRK+RH
Subjt:  DDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKRH

SwissProt top hitse value%identityAlignment
B1WC40 Nuclear cap-binding protein subunit 22.5e-5370.21Show/hide
Query:  KLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRADF
        +LS YRD+ F+G  +E E  L+ S TLYVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRADF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

B7P877 Nuclear cap-binding protein subunit 28.7e-5468.09Show/hide
Query:  LSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRADFD
        LS YRD+ F+G++ E E  L+ STTLYVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+RED E+A+++++GT LDDR IR D+D
Subjt:  LSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRADFD

Query:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL
         GF +GRQ+GRG+SGGQVRDEYRTDYD GRGGYGKL+ + +
Subjt:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL

Q84L14 Nuclear cap-binding protein subunit 27.2e-9373.02Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS YRDRRF GTQ+E+E ALQ S T+YVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF+LYYSRED EDAVK+ISGT+L
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHG--HRHGRDYHPRKRY
        DDRPIR DFDWGF++GRQWGRGRSGGQVRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG       P+A PQY +    +G+G  +R+ RDY  RKRY
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHG--HRHGRDYHPRKRY

Query:  RDDDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKR
        R+D+R    SS+R  D E +R+       EKNPRFRE+GDSDEEDDD  K+R
Subjt:  RDDDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKR

Q9CQ49 Nuclear cap-binding protein subunit 22.5e-5370.21Show/hide
Query:  KLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRADF
        +LS YRD+ F+G  +E E  L+ S TLYVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRADF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 21.4e-10477.04Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL+ STT+Y+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMP-QYG---KHGGSQGHG--HRHGR-DYH
        DDRPIR DFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+ P A P  YG   + GG+ G G  +RHGR DYH
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMP-QYG---KHGGSQGHG--HRHGR-DYH

Query:  PRKRYRDDDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKR
         RKR RDDDR+  ++S+RN+D+ESRR+ D + RPEKNPRFRE GDSD++ +DDRK+R
Subjt:  PRKRYRDDDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-0829.41Show/hide
Query:  RDRRFQGTQDEFEHAL--------QTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E  L        +  TT+Y+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEHAL--------QTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  AD
         +
Subjt:  AD

AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein3.3e-0833.78Show/hide
Query:  TSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPI
        + +TLYV N+ F  T   ++ LFS  G++ ++ +  D++++   G  FVLY SRED   A + +   IL+ R +
Subjt:  TSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPI

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0836.36Show/hide
Query:  ALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPI
        A + S  L+V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F+ + S +D   A+K + G I+D R I
Subjt:  ALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPI

AT5G44200.1 CAP-binding protein 201.0e-10577.04Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL+ STT+Y+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMP-QYG---KHGGSQGHG--HRHGR-DYH
        DDRPIR DFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+ P A P  YG   + GG+ G G  +RHGR DYH
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMP-QYG---KHGGSQGHG--HRHGR-DYH

Query:  PRKRYRDDDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKR
         RKR RDDDR+  ++S+RN+D+ESRR+ D + RPEKNPRFRE GDSD++ +DDRK+R
Subjt:  PRKRYRDDDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKR

AT5G44200.2 CAP-binding protein 201.0e-10577.04Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL+ STT+Y+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMP-QYG---KHGGSQGHG--HRHGR-DYH
        DDRPIR DFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+ P A P  YG   + GG+ G G  +RHGR DYH
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMP-QYG---KHGGSQGHG--HRHGR-DYH

Query:  PRKRYRDDDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKR
         RKR RDDDR+  ++S+RN+D+ESRR+ D + RPEKNPRFRE GDSD++ +DDRK+R
Subjt:  PRKRYRDDDRHAHESSKRNSDYESRRNPDHESRPEKNPRFRERGDSDEEDDDDRKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCATTGTTCAAGGACCCATCAAAGCTATCTGTATATCGGGATAGAAGATTTCAGGGAACACAAGATGAATTTGAGCATGCACTTCAGACTTCAACCACACTTTA
TGTGGGAAATATGTCCTTCTATACAACAGAAGAACAAGTTTATGAGCTATTTTCTCGAGCTGGTGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACTC
CTTGTGGCTTCTGTTTTGTCCTATACTATTCTCGGGAGGATACTGAAGATGCTGTGAAATTTATAAGTGGAACAATTCTTGATGATCGTCCTATTCGTGCGGATTTTGAT
TGGGGATTTCAGGACGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGGAAAATTAGT
TCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCCGTCAGCCATGCCTCAGTATGGAAAACATGGTGGAAGTCAGGGAC
ATGGGCATCGTCATGGTAGAGATTACCACCCCCGTAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTCTAAGAGAAATTCCGATTATGAGTCTAGAAGAAAT
CCAGATCATGAATCCAGACCGGAGAAGAATCCAAGGTTTCGAGAGAGAGGCGATTCTGATGAAGAGGACGATGATGACCGAAAGAAGCGACACTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAATGTACATCTCTAAATATAATTGGGACAAGTAGATGAATTGACCGATTGAAAATTGTTTGGCTTTATGAAATTAGGCTTTGTATTATACGCACCGCTCGGAAGAG
GTGTATAGATTGGGCGCATTACACAGCGCAGGGGGAAGCATAGGGCAGCTGAGCTCACCCAACGAGTTCTCCAGTTTCCGAAATTTACTTCGTCTGAAGTGGGGTTTCGA
GTTGCAGTGCAGATTTTGTTATTCTAGGGTTTATGGCTTCATTGTTCAAGGACCCATCAAAGCTATCTGTATATCGGGATAGAAGATTTCAGGGAACACAAGATGAATTT
GAGCATGCACTTCAGACTTCAACCACACTTTATGTGGGAAATATGTCCTTCTATACAACAGAAGAACAAGTTTATGAGCTATTTTCTCGAGCTGGTGAAATTAAGAAGAT
AATCATGGGTTTGGATAAGAATTCAAAAACTCCTTGTGGCTTCTGTTTTGTCCTATACTATTCTCGGGAGGATACTGAAGATGCTGTGAAATTTATAAGTGGAACAATTC
TTGATGATCGTCCTATTCGTGCGGATTTTGATTGGGGATTTCAGGACGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTAT
GATCCTGGTAGAGGTGGCTATGGAAAATTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCCGTCAGCCATGCC
TCAGTATGGAAAACATGGTGGAAGTCAGGGACATGGGCATCGTCATGGTAGAGATTACCACCCCCGTAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTCTA
AGAGAAATTCCGATTATGAGTCTAGAAGAAATCCAGATCATGAATCCAGACCGGAGAAGAATCCAAGGTTTCGAGAGAGAGGCGATTCTGATGAAGAGGACGATGATGAC
CGAAAGAAGCGACACTAACCAGAGTGTCGTTGCCATATTATCATGCAAGGAACCATTTGAATTGGCCTTGTGCAGTCCAGCACAAGTGATAGCAGTTCATTACGCCTGTC
AAAACTAGCGAGTTCTTTTTTCATGTTACGAGGTAGTTATGCTATGTTTAATGATGACATGACTTTATTTGTTGCCTGTACTGTTTATTATAGTAGGCATCGTGTTGAAC
AATCTTCAAGAAGATAAATTATATACAATTCTCAACAGAAAGTACATCAGCTAGTGTGTTTTGTGCATTGAATCGAAATTGAATGTAATTGAGAGGGAAAACTAATTTCC
ATTTTGGTA
Protein sequenceShow/hide protein sequence
MASLFKDPSKLSVYRDRRFQGTQDEFEHALQTSTTLYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRADFD
WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSAMPQYGKHGGSQGHGHRHGRDYHPRKRYRDDDRHAHESSKRNSDYESRRN
PDHESRPEKNPRFRERGDSDEEDDDDRKKRH