CuGenDBv2

Gene ID	Sed0010410
Organism	Sechium edule (Chayote v1)
Description	ThiF domain-containing protein
Genome location	LG05:33471567..33472369
RNA-Seq Expression	Sed0010410
Synteny	Sed0010410
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7022864.1 hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.7e-40

73.23

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSR   R +KS  E+FHKYLKPGALAQIRNSR+IAR NR+N +SQI+STRSSS+SPP AP++S  L+QVNIVD SPCFAGR+YGPL LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC-FIGSIPTSLTSDSPTDPVIEVFSG
        S  F+ S PT+LT DSP DPVIEV  G
Subjt:  SC-FIGSIPTSLTSDSPTDPVIEVFSG

XP_022135897.1 uncharacterized protein LOC111007734 [Momordica charantia]

1.2e-37

72.44

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSRT HR   S  ESFHKYLKPGALAQIRNSR+IAR NR+N VSQI+S R SS+SPP AP++S GL+QVNIVD SPCFAGR+YGP  LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC-FIGSIPTSLTSDSPTDPVIEVFSG
        S  F+   PT+L  DSP DPVIEV  G
Subjt:  SC-FIGSIPTSLTSDSPTDPVIEVFSG

XP_022930695.1 uncharacterized protein LOC111437092 [Cucurbita moschata]

2.9e-39

73.23

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSR   R +KS  E+FHKYLKPGALAQIRNSR+IAR NR+N VSQI+STR SS+SPP AP++S  L+QVNIVD SPCFAGR+YGPL LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC-FIGSIPTSLTSDSPTDPVIEVFSG
        S  F+ S PT+LT DSP DPVIEV  G
Subjt:  SC-FIGSIPTSLTSDSPTDPVIEVFSG

XP_022989505.1 uncharacterized protein LOC111486563 [Cucurbita maxima]

8.5e-39

73.23

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSR   R +KS  E+FHKYLKPGALAQIRNSR+IAR NR+N VSQI+STRSSS+SPP AP++S  L+QVNIVD SPCFAGR+YGPL LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC-FIGSIPTSLTSDSPTDPVIEVFSG
        S  F+ S  T+LT DSP DPVIEV  G
Subjt:  SC-FIGSIPTSLTSDSPTDPVIEVFSG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]

4.5e-40

74.02

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSR   R +KS  E+FHKYLKPGALAQIRNSR+IAR NR+N VSQI+STRSSS+SPP AP++S  L+QVNIVD SPCFAGR+YGPL LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC-FIGSIPTSLTSDSPTDPVIEVFSG
        S  F+ S PT+LT DSP DPVIEV  G
Subjt:  SC-FIGSIPTSLTSDSPTDPVIEVFSG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C424 uncharacterized protein LOC111007734

5.9e-38

72.44

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSRT HR   S  ESFHKYLKPGALAQIRNSR+IAR NR+N VSQI+S R SS+SPP AP++S GL+QVNIVD SPCFAGR+YGP  LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC-FIGSIPTSLTSDSPTDPVIEVFSG
        S  F+   PT+L  DSP DPVIEV  G
Subjt:  SC-FIGSIPTSLTSDSPTDPVIEVFSG

A0A6J1EXJ2 uncharacterized protein LOC111437092

1.4e-39

73.23

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSR   R +KS  E+FHKYLKPGALAQIRNSR+IAR NR+N VSQI+STR SS+SPP AP++S  L+QVNIVD SPCFAGR+YGPL LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC-FIGSIPTSLTSDSPTDPVIEVFSG
        S  F+ S PT+LT DSP DPVIEV  G
Subjt:  SC-FIGSIPTSLTSDSPTDPVIEVFSG

A0A6J1GLZ8 uncharacterized protein LOC111455201

2.5e-36

71.09

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSR   R   S  E+FHKYLKPGALAQIRNSR+IAR NR+N VSQI+STRSSS+SP  AP+ S GL+QVNI D SPCFAGR+YGPL LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC--FIGSIPTSLTSDSPTDPVIEVFSG
        S   F+ S PT+LT DSP DPVI V  G
Subjt:  SC--FIGSIPTSLTSDSPTDPVIEVFSG

A0A6J1HVZ0 uncharacterized protein LOC111468346

1.5e-33

67.97

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSR   R   S  E+FHKYLKPGALAQIRNSR+IAR NR+N VSQI+STR SS+S    PM S GL+QVN+ D SPCFAGR+YGPL LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC--FIGSIPTSLTSDSPTDPVIEVFSG
        S   F+ S  T+LT DSP DPVI V  G
Subjt:  SC--FIGSIPTSLTSDSPTDPVIEVFSG

A0A6J1JMJ5 uncharacterized protein LOC111486563

4.1e-39

73.23

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Query:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK
        MNRRSR   R +KS  E+FHKYLKPGALAQIRNSR+IAR NR+N VSQI+STRSSS+SPP AP++S  L+QVNIVD SPCFAGR+YGPL LQRKKLLAAK
Subjt:  MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAK

Query:  SC-FIGSIPTSLTSDSPTDPVIEVFSG
        S  F+ S  T+LT DSP DPVIEV  G
Subjt:  SC-FIGSIPTSLTSDSPTDPVIEVFSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

3.7e-08

37.5

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Query:  ESFHKYLKPGALAQIRNSRI-IARSNRINPVSQIHSTRSSSISPPIAPMNS--GGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAKSCFIGSIPT
        + FH+Y+KPGALAQIRN+RI  ARSN       +  + S  + PP +   S      Q   +D  P    ++YGP  + RKKL  A+S  +   P+
Subjt:  ESFHKYLKPGALAQIRNSRI-IARSNRINPVSQIHSTRSSSISPPIAPMNS--GGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAKSCFIGSIPT

AT5G54970.1 unknown protein

3.6e-11

43.88

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Query:  AKSP---PESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAP----MNSGGLVQVNI-VDDSPCFAGRMYGPLSLQRKKLLAAKS
        +KSP    + FH+YLKPGALAQIRNSRI ARS      S +  +  S +  PI+P    ++       N+ +D  P    ++YGP S QRKKL AA+S
Subjt:  AKSP---PESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAP----MNSGGLVQVNI-VDDSPCFAGRMYGPLSLQRKKLLAAKS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAATCGAAGATCCAGAACCCTTCACCGGCCGGCCAAGTCTCCGCCGGAGTCGTTTCACAAGTATCTAAAGCCCGGCGCACTGGCGCAAATTCGGAATTCCCGGATCAT
CGCCCGGTCCAATCGGATCAACCCGGTCTCTCAGATCCACTCCACTCGTTCCTCTTCCATATCACCGCCGATCGCTCCGATGAACTCCGGCGGTCTGGTTCAGGTCAACA
TTGTTGACGATTCTCCTTGCTTTGCCGGGAGGATGTACGGTCCTCTATCTTTGCAGAGGAAGAAGCTTTTGGCTGCTAAATCGTGTTTCATCGGTTCCATTCCGACGAGT
TTGACCTCCGATTCACCGACTGATCCGGTTATTGAAGTGTTTAGTGGATGA

mRNA sequence

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ATTTTATTTTCCCGCCTTTTTTCCCTCTATCTCACTCCATAAATCCCCAATCCCCAATCTCCTTCTTCATCATCTTCACTCCCAATTCTCTGCAACATGAATCGAAGATC
CAGAACCCTTCACCGGCCGGCCAAGTCTCCGCCGGAGTCGTTTCACAAGTATCTAAAGCCCGGCGCACTGGCGCAAATTCGGAATTCCCGGATCATCGCCCGGTCCAATC
GGATCAACCCGGTCTCTCAGATCCACTCCACTCGTTCCTCTTCCATATCACCGCCGATCGCTCCGATGAACTCCGGCGGTCTGGTTCAGGTCAACATTGTTGACGATTCT
CCTTGCTTTGCCGGGAGGATGTACGGTCCTCTATCTTTGCAGAGGAAGAAGCTTTTGGCTGCTAAATCGTGTTTCATCGGTTCCATTCCGACGAGTTTGACCTCCGATTC
ACCGACTGATCCGGTTATTGAAGTGTTTAGTGGATGAATGAATAGTTTTCAAGTTGTGAATCGATGTTTTCTTTGTGGAATTAATGTCGATGTGTAGTAGTACATTATAC
CTTTGTAGGTTTCTGGTTATGTGAAATTTTTTCTTGATTTTAACGGAATTGAGATAATAAGATCTGCCGTATTCTCGATCTATTGTGTTAAACTTAATTATGGCTATTAG
GTATATGAAATTCTATTGAACTGCTATGATCTAGGGCTCATTTTGGATCTTAAAGCTTGGGGCATAGTTGAACTTGTCGTCGATCTTCGACTGATAAATAAGCGTTGGAA
GCATTCGTGAACTTCTTCCAGCAATTTCACCGA

Protein sequence

Show/hide protein sequence

MNRRSRTLHRPAKSPPESFHKYLKPGALAQIRNSRIIARSNRINPVSQIHSTRSSSISPPIAPMNSGGLVQVNIVDDSPCFAGRMYGPLSLQRKKLLAAKSCFIGSIPTS
LTSDSPTDPVIEVFSG

Sed0010410 (gene) of Chayote v1 genome