; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010418 (gene) of Chayote v1 genome

Gene IDSed0010418
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich cell wall structural protein
Genome locationLG12:2496737..2498469
RNA-Seq ExpressionSed0010418
SyntenySed0010418
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597313.1 hypothetical protein SDJN03_10493, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2360.85Show/hide
Query:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG
        ME++FVML L V   A AAR VPGG++VQFVDAVEV+AAELP   GG A RDEK FIYGGV          GLGMP LGGSAGIGKFGGIGGF GIG+PG
Subjt:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG

Query:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGH
        G GG+G     GGGGGGG GG  G G GGAGG GGI G G GG    GGGIG + GHGLGG GG+GG G   GG +G+G          G GG+GG  G 
Subjt:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGH

Query:  GLGGSGGLDVHG
        G GG+GG+ V G
Subjt:  GLGGSGGLDVHG

KAG7028780.1 hypothetical protein SDJN02_09961, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2259.29Show/hide
Query:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG
        ME++FVML L V   A AAR VPGG++VQFVDAVEV+AAELP   GG A RDEK FIYGGV          GLGMP LGGSAGIGKFGGIGGF GIG+PG
Subjt:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG

Query:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGI-------GGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGG
        G GG+G     GGGGGGG GG  G GGGG GG  G G GGAGG GGI       GGGIGG+ GHGLGG GG+GG G   GG +G+G          G GG
Subjt:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGI-------GGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGG

Query:  LGGLAGHGLGGSGGLDVHGLGGPVGP
        +GG  G G GG+G +     GG V P
Subjt:  LGGLAGHGLGGSGGLDVHGLGGPVGP

XP_022945139.1 glycine-rich protein 5 isoform X1 [Cucurbita moschata]4.3e-2457.59Show/hide
Query:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG
        ME++FVML L V   A AAR VPG ++VQFVDAV+V+AAEL    GG A RDEK FIYGGV          GLGMP LGGSAGIGKFGGIGGF GIG+PG
Subjt:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG

Query:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAG-----HGLGGLG
        G GG+       GGGGGG GG GG  G G GG GG+ G G GGA    GGIGG+ GHGLGG       G G+GG+ GHGLGG G + G      G GG G
Subjt:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAG-----HGLGGLG

Query:  GLAGHGLGGSGGLDVHGLGGPVGP
        G+ G G GG GG  V  +GG V P
Subjt:  GLAGHGLGGSGGLDVHGLGGPVGP

XP_022974868.1 glycine-rich cell wall structural protein [Cucurbita maxima]2.9e-2862.84Show/hide
Query:  MERVFVMLLLVVAEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPGGTG
        ME++FVML L V  AAR VPG +QVQFVDAVEV+AAELP   GGGAVRDEKNFIYGGV          GLGMP LGGSAGIGKFGGIGGF GIG+PGG G
Subjt:  MERVFVMLLLVVAEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPGGTG

Query:  GLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGG-HGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGH-G
        G+G     GGGGGGG GG  G G GGAGG GG+ G G GGA    GGIGG+ GHG+GG+GG+GG  G G+GG  G G  G GD    G GG+GG  G  G
Subjt:  GLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGG-HGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGH-G

Query:  LGGSGGLDVHGLGGPVGP
         GG+GG+ V   GG V P
Subjt:  LGGSGGLDVHGLGGPVGP

XP_023540607.1 glycine-rich cell wall structural protein 1 [Cucurbita pepo subsp. pepo]5.1e-2562.5Show/hide
Query:  MERVFVMLLLVVAEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPGGTG
        ME++F ML L V  AAR VPG +Q QFVDAVEV+AAELP   GG A RDEK FIYGGV          GLGMP LGGSAGIGKFGGIGGF GIGNPGG G
Subjt:  MERVFVMLLLVVAEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPGGTG

Query:  GLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGHGLG
        G+G G   GGGGGGG GG  G G GGAGG GG+ G G GGAGGI GGI G G  G GG+GG+ GHGL  GG  G G  G GD    G GG+GG  G G G
Subjt:  GLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGHGLG

Query:  GSGGLDVHGLGGPVGP
        G+GG+ V   GG V P
Subjt:  GSGGLDVHGLGGPVGP

TrEMBL top hitse value%identityAlignment
A0A0A0L460 Uncharacterized protein3.1e-2068.71Show/hide
Query:  MERVFVMLLLVVAEAARGVPGGDQVQFVDAVEVRAAELPRDGG-GGAVRDEKNFIYGGVGL-GMPTLGGSAGIGKFGGIGGFVGIGNPGGTGGLGNGG-G
        ME++FVM LLV   AARGVPGGDQ +FV+AVEV+AAELPR+ G G AVRDEKNFIYGGVGL G+P LGGSAGIGKFGGIGG  GIG+ G  GGLG GG G
Subjt:  MERVFVMLLLVVAEAARGVPGGDQVQFVDAVEVRAAELPRDGG-GGAVRDEKNFIYGGVGL-GMPTLGGSAGIGKFGGIGGFVGIGNPGGTGGLGNGG-G

Query:  YGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGI--GGGIGGLGGHGLGGLGGLGGHGLG
         G GG  G GG  G G GGAGG GG+ G G GGAGG+  G GIGG+GG   GG+GG GG G G
Subjt:  YGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGI--GGGIGGLGGHGLGGLGGLGGHGLG

A0A6J1D0S3 glycine-rich cell wall structural protein3.8e-1860Show/hide
Query:  MERVFVMLLL----VVAEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGVGLGMPTLGGSAGIGKFGGIGGFVGIGNPGGTGGLGNGG
        M ++ VMLLL     VA AAR VPGG Q++ VDAVEV+AAELP D  G AVRD+KNF+YGGVG G   +GG AG+G   G+GG VGIG  GG GG    G
Subjt:  MERVFVMLLL----VVAEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGVGLGMPTLGGSAGIGKFGGIGGFVGIGNPGGTGGLGNGG

Query:  GYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAG-GAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGHGLGGSGGL
         +GG G GG GG  G  GG  GG GGIGGGGA   AGG+GGGIGGL GH   GLGGL GHGL  GGLAGHGLGG G + G    GLGGL GHG+G +GG+
Subjt:  GYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAG-GAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGHGLGGSGGL

Query:  DVHGLGGPVG
          +   G VG
Subjt:  DVHGLGGPVG

A0A6J1G005 glycine-rich cell wall structural protein 1 isoform X29.7e-2258.9Show/hide
Query:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG
        ME++FVML L V   A AAR VPG ++VQFVDAV+V+AAEL    GG A RDEK FIYGGV          GLGMP LGGSAGIGKFGGIGGF GIG+PG
Subjt:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG

Query:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGH
        G GG+G G   GGGGGGG GG  G G GGAGG GGI G G GG    GGGIGG+ GHGLGG GG+GG G   GG +G+             GG GG+ G 
Subjt:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGH

Query:  GLGGSGGLDVHGLGGPVGP
        G GG GG  V  +GG V P
Subjt:  GLGGSGGLDVHGLGGPVGP

A0A6J1G053 glycine-rich protein 5 isoform X12.1e-2457.59Show/hide
Query:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG
        ME++FVML L V   A AAR VPG ++VQFVDAV+V+AAEL    GG A RDEK FIYGGV          GLGMP LGGSAGIGKFGGIGGF GIG+PG
Subjt:  MERVFVMLLLVV---AEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPG

Query:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAG-----HGLGGLG
        G GG+       GGGGGG GG GG  G G GG GG+ G G GGA    GGIGG+ GHGLGG       G G+GG+ GHGLGG G + G      G GG G
Subjt:  GTGGLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAG-----HGLGGLG

Query:  GLAGHGLGGSGGLDVHGLGGPVGP
        G+ G G GG GG  V  +GG V P
Subjt:  GLAGHGLGGSGGLDVHGLGGPVGP

A0A6J1IHK9 glycine-rich cell wall structural protein1.4e-2862.84Show/hide
Query:  MERVFVMLLLVVAEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPGGTG
        ME++FVML L V  AAR VPG +QVQFVDAVEV+AAELP   GGGAVRDEKNFIYGGV          GLGMP LGGSAGIGKFGGIGGF GIG+PGG G
Subjt:  MERVFVMLLLVVAEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGV----------GLGMPTLGGSAGIGKFGGIGGFVGIGNPGGTG

Query:  GLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGG-HGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGH-G
        G+G     GGGGGGG GG  G G GGAGG GG+ G G GGA    GGIGG+ GHG+GG+GG+GG  G G+GG  G G  G GD    G GG+GG  G  G
Subjt:  GLGNGGGYGGGGGGGAGGSGGTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGG-HGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGH-G

Query:  LGGSGGLDVHGLGGPVGP
         GG+GG+ V   GG V P
Subjt:  LGGSGGLDVHGLGGPVGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGGTTTTTGTAATGCTCTTGTTGGTCGTTGCTGAGGCGGCGCGTGGTGTTCCCGGCGGCGATCAGGTGCAGTTTGTGGACGCCGTTGAAGTGAGGGCGGCGGA
GCTGCCGAGGGACGGCGGCGGTGGTGCTGTTCGTGACGAGAAGAATTTTATCTATGGTGGAGTTGGGTTGGGTATGCCGACGCTGGGAGGCTCGGCTGGAATCGGAAAAT
TCGGCGGAATTGGAGGCTTCGTCGGAATAGGTAATCCAGGTGGCACCGGCGGCTTGGGCAATGGTGGAGGATATGGTGGCGGCGGTGGTGGAGGCGCTGGTGGGTCCGGC
GGTACAGGCGGCGGAGGAGCTGGTGGTGCCGGCGGCATTGGCGGTGGTGGAGCTGGTGGTGCAGGCGGTATAGGCGGCGGAATAGGAGGACTAGGTGGACATGGACTTGG
CGGATTAGGCGGTCTAGGTGGACACGGACTTGGAGTTGGCGGTCTAGCTGGACATGGGCTTGGTGGATTAGGTGATCTAGCTGGACATGGACTTGGCGGATTGGGTGGTC
TAGCTGGACATGGACTTGGCGGATCTGGCGGTCTAGACGTACATGGACTTGGCGGTCCAGTTGGGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGGTTTTTGTAATGCTCTTGTTGGTCGTTGCTGAGGCGGCGCGTGGTGTTCCCGGCGGCGATCAGGTGCAGTTTGTGGACGCCGTTGAAGTGAGGGCGGCGGA
GCTGCCGAGGGACGGCGGCGGTGGTGCTGTTCGTGACGAGAAGAATTTTATCTATGGTGGAGTTGGGTTGGGTATGCCGACGCTGGGAGGCTCGGCTGGAATCGGAAAAT
TCGGCGGAATTGGAGGCTTCGTCGGAATAGGTAATCCAGGTGGCACCGGCGGCTTGGGCAATGGTGGAGGATATGGTGGCGGCGGTGGTGGAGGCGCTGGTGGGTCCGGC
GGTACAGGCGGCGGAGGAGCTGGTGGTGCCGGCGGCATTGGCGGTGGTGGAGCTGGTGGTGCAGGCGGTATAGGCGGCGGAATAGGAGGACTAGGTGGACATGGACTTGG
CGGATTAGGCGGTCTAGGTGGACACGGACTTGGAGTTGGCGGTCTAGCTGGACATGGGCTTGGTGGATTAGGTGATCTAGCTGGACATGGACTTGGCGGATTGGGTGGTC
TAGCTGGACATGGACTTGGCGGATCTGGCGGTCTAGACGTACATGGACTTGGCGGTCCAGTTGGGCCATAA
Protein sequenceShow/hide protein sequence
MERVFVMLLLVVAEAARGVPGGDQVQFVDAVEVRAAELPRDGGGGAVRDEKNFIYGGVGLGMPTLGGSAGIGKFGGIGGFVGIGNPGGTGGLGNGGGYGGGGGGGAGGSG
GTGGGGAGGAGGIGGGGAGGAGGIGGGIGGLGGHGLGGLGGLGGHGLGVGGLAGHGLGGLGDLAGHGLGGLGGLAGHGLGGSGGLDVHGLGGPVGP