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Sed0010424 (gene) of Chayote v1 genome

Gene IDSed0010424
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG13:22356004..22356279
RNA-Seq ExpressionSed0010424
SyntenySed0010424
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]4.4e-2975.28Show/hide
Query:  TRNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV
        +R  K YH RA+LSREQL LIFRNHD D DGRLS TELTEAF+YIGA LP YRA  AL +ADSDRDGFI E DFELLVNYAE+R+YTV+
Subjt:  TRNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2877.91Show/hide
Query:  RNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYT
        R  K Y  R KLSREQLS+IFRNHDGDGDGRLS TELT AF+YIGA LP YRA  AL + DSD DGFIGE DFELLVNYAEKRKYT
Subjt:  RNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYT

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3179.55Show/hide
Query:  RNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV
        R  K+   R KLSREQLS+IFRNHDGDGDGRLSATELTEAF+YIGA LP YRAH ALRY DSDRDGFIGE DFE LVNY EKR YT+V
Subjt:  RNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-2977.27Show/hide
Query:  RNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV
        R  K Y  R KLSREQLS+IFRNHDGDGDGRLS TELT AF+YIGA LP YRA  AL + DSD DGFIGE DFELLVNYAEKRKYTV+
Subjt:  RNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]9.8e-2974.16Show/hide
Query:  TRNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV
        +R  K Y+ RAKLSREQL LIFRNHD D DGRLS TELTEAF+YIGA LP YRA  AL +ADSDRDGFIGE DFE LVNYAE+R+YT++
Subjt:  TRNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein4.7e-2974.16Show/hide
Query:  TRNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV
        +R  K Y+ RAKLSREQL LIFRNHD D DGRLS TELTEAF+YIGA LP YRA  AL +ADSDRDGFIGE DFE LVNYAE+R+YT++
Subjt:  TRNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV

A0A5A7VDB9 Putative calcium-binding protein CML272.1e-2975.28Show/hide
Query:  TRNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV
        +R  K YH RA+LSREQL LIFRNHD D DGRLS TELTEAF+YIGA LP YRA  AL +ADSDRDGFI E DFELLVNYAE+R+YTV+
Subjt:  TRNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV

A0A6J1GK16 calmodulin-like3.9e-1556.94Show/hide
Query:  KLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEK
        KLSR Q+  IF  HD DGDG LS +ELT+AF + G+++PLY+AH  L YAD+D DG I E + E LV+YAE+
Subjt:  KLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEK

A0A6J1KUW2 calmodulin-like3.9e-1556.94Show/hide
Query:  KLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEK
        KLSR Q+  IF  HD DGDG LS +ELT+AF + G+++PLY+AH  L YAD+D DG I E + E LV+YAE+
Subjt:  KLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEK

A5AWP8 Uncharacterized protein5.1e-1549.41Show/hide
Query:  PKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTV
        PK    ++ L  +QL  IF+ HD +GDG+L+  EL +AFQ++GAL+P +RAHRAL +AD+D DG I E + + LV YA K  YT+
Subjt:  PKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTV

SwissProt top hitse value%identityAlignment
Q0DJV6 Probable calcium-binding protein CML187.1e-0639.66Show/hide
Query:  QLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDF
        +L  +FR +D +GDG++SA EL    + +GA L      R +   DSDRDGF+  ++F
Subjt:  QLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDF

Q6L4D4 Probable calcium-binding protein CML151.0e-0433.85Show/hide
Query:  RAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDF
        R   + ++   +FR  D +GDGR+S  EL   F+ +G  +      R ++ ADSD DG+I   +F
Subjt:  RAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDF

Q8L3R2 Probable calcium-binding protein CML415.4e-0639.34Show/hide
Query:  SREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDF
        S+E+L  +F + D DGDG++SA EL   F  +G  +    A  A+   D+D DG +G  DF
Subjt:  SREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDF

Q8RZB5 Probable calcium-binding protein CML106.0e-0535.82Show/hide
Query:  AKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELL
        A    E++  +FR  D +GDGR+S +EL   F+ +G         R +  AD+D DGFI  ++F  L
Subjt:  AKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELL

Q9LE22 Probable calcium-binding protein CML277.8e-0535.48Show/hide
Query:  EQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELL
        E+L  +F   D +GDG++S  EL   F+ +G        +R L   D+DRDG+I  ++F  L
Subjt:  EQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein5.6e-0635.48Show/hide
Query:  EQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELL
        E+L  +F   D +GDG++S  EL   F+ +G        +R L   D+DRDG+I  ++F  L
Subjt:  EQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELL

AT1G18210.2 Calcium-binding EF-hand family protein5.6e-0635.48Show/hide
Query:  EQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELL
        E+L  +F   D +GDG++S  EL   F+ +G        +R L   D+DRDG+I  ++F  L
Subjt:  EQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELL

AT1G32250.1 Calcium-binding EF-hand family protein4.7e-0535.29Show/hide
Query:  SREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYA
        + EQL  +FR  D DG+G ++A EL  +   +G  L +      ++ ADSD DG I   +F   +N A
Subjt:  SREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYA

AT1G76640.1 Calcium-binding EF-hand family protein9.5e-0636.07Show/hide
Query:  LSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLV
        L  +F   D + DGR+SA EL ++F+ +G  +    A  A++ +D D DG +  N+F LL+
Subjt:  LSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLV

AT3G50770.1 calmodulin-like 413.9e-0739.34Show/hide
Query:  SREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDF
        S+E+L  +F + D DGDG++SA EL   F  +G  +    A  A+   D+D DG +G  DF
Subjt:  SREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACAAGGAACCCCAAGCTGTACCACCAGAGGGCCAAGCTATCTCGAGAGCAACTAAGCTTAATATTCCGAAACCACGACGGGGATGGCGATGGTCGCCTCAGCGC
CACCGAGCTCACCGAAGCGTTTCAGTACATCGGCGCTCTTCTTCCGTTGTATAGAGCTCATCGTGCTCTTCGCTATGCTGATTCCGACAGAGATGGATTCATTGGCGAAA
ATGATTTCGAATTGCTCGTCAATTATGCCGAGAAACGGAAATACACCGTCGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACAAGGAACCCCAAGCTGTACCACCAGAGGGCCAAGCTATCTCGAGAGCAACTAAGCTTAATATTCCGAAACCACGACGGGGATGGCGATGGTCGCCTCAGCGC
CACCGAGCTCACCGAAGCGTTTCAGTACATCGGCGCTCTTCTTCCGTTGTATAGAGCTCATCGTGCTCTTCGCTATGCTGATTCCGACAGAGATGGATTCATTGGCGAAA
ATGATTTCGAATTGCTCGTCAATTATGCCGAGAAACGGAAATACACCGTCGTTTGA
Protein sequenceShow/hide protein sequence
MTTRNPKLYHQRAKLSREQLSLIFRNHDGDGDGRLSATELTEAFQYIGALLPLYRAHRALRYADSDRDGFIGENDFELLVNYAEKRKYTVV