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Sed0010429 (gene) of Chayote v1 genome

Gene IDSed0010429
OrganismSechium edule (Chayote v1)
DescriptionGlucan endo-1,3-beta-glucosidase
Genome locationLG04:38073953..38074885
RNA-Seq ExpressionSed0010429
SyntenySed0010429
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607951.1 Glucan endo-1,3-beta-D-glucosidase, partial [Cucurbita argyrosperma subsp. sororia]5.6e-4467.91Show/hide
Query:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP
        A A+SF LLFLSG+L A N  QKTWCVARPSSD ATLLANINYACSQVDCRI+Q+GCPC YPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDP
Subjt:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP

Query:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        S                          YGNCLYP
Subjt:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

XP_022137818.1 glucan endo-1,3-beta-D-glucosidase [Momordica charantia]3.1e-4268.12Show/hide
Query:  ATALSFFLLFLS----GNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIV
        A AL F LLFLS    G+L A N  +KTWCVARPSSDKATLLANINYACSQVDCRI+Q+GCPC YPDNLIN ASVAMNLYYHSRGKNQWNCDFRGSALIV
Subjt:  ATALSFFLLFLS----GNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIV

Query:  ITDPSQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        ITDPS                          YGNC+YP
Subjt:  ITDPSQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

XP_022941529.1 glucan endo-1,3-beta-glucosidase-like isoform X1 [Cucurbita moschata]3.3e-4468.66Show/hide
Query:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP
        A ALSF LLFLSG+L A N  QKTWCVARPSSD ATLLANINYACSQVDCRI+Q+GCPC YPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDP
Subjt:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP

Query:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        S                          YGNCLYP
Subjt:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

XP_022982185.1 major pollen allergen Ole e 10-like isoform X1 [Cucurbita maxima]1.4e-4266.42Show/hide
Query:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP
        A  LSF LLFLSG+L A N  QKTWCV RPSSD ATLLANI+YACSQVDCRI+Q+GCPC YPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDP
Subjt:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP

Query:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        S                          YGNCLYP
Subjt:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

XP_023525198.1 major pollen allergen Ole e 10-like isoform X1 [Cucurbita pepo subsp. pepo]3.6e-4367.16Show/hide
Query:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP
        A  LSF LLFLSG+L A N  QKTWCVARPSSD ATLLANI+YACSQVDCRI+Q+GCPC YPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDP
Subjt:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP

Query:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        S                          YGNCLYP
Subjt:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

TrEMBL top hitse value%identityAlignment
A0A6J1CBF4 glucan endo-1,3-beta-D-glucosidase1.5e-4268.12Show/hide
Query:  ATALSFFLLFLS----GNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIV
        A AL F LLFLS    G+L A N  +KTWCVARPSSDKATLLANINYACSQVDCRI+Q+GCPC YPDNLIN ASVAMNLYYHSRGKNQWNCDFRGSALIV
Subjt:  ATALSFFLLFLS----GNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIV

Query:  ITDPSQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        ITDPS                          YGNC+YP
Subjt:  ITDPSQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

A0A6J1FNL6 glucan endo-1,3-beta-glucosidase-like isoform X11.6e-4468.66Show/hide
Query:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP
        A ALSF LLFLSG+L A N  QKTWCVARPSSD ATLLANINYACSQVDCRI+Q+GCPC YPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDP
Subjt:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP

Query:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        S                          YGNCLYP
Subjt:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

A0A6J1FTX7 major pollen allergen Ole e 10-like isoform X21.5e-4267.91Show/hide
Query:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP
        A ALSF LLFLSG+L A N  Q TWCVARPSSD ATLLANINYACSQVDCRI+Q+GCPC YPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDP
Subjt:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP

Query:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        S                          YGNCLYP
Subjt:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

A0A6J1IYM5 major pollen allergen Ole e 10-like isoform X26.3e-4165.67Show/hide
Query:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP
        A  LSF LLFLSG+L A N  Q TWCV RPSSD ATLLANI+YACSQVDCRI+Q+GCPC YPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDP
Subjt:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP

Query:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        S                          YGNCLYP
Subjt:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

A0A6J1J1Y2 major pollen allergen Ole e 10-like isoform X16.7e-4366.42Show/hide
Query:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP
        A  LSF LLFLSG+L A N  QKTWCV RPSSD ATLLANI+YACSQVDCRI+Q+GCPC YPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDP
Subjt:  ATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDP

Query:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP
        S                          YGNCLYP
Subjt:  SQFNFCRKLIFVFALFLFVIFFFFAAGYGNCLYP

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 19.1e-1339.13Show/hide
Query:  SGNLFAANANQKTWCVARPSSDKATLLANINYAC--SQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS
        SG   A +   +T+C+A    D  TL A +++AC   + +C  IQ G  C  P+N+   AS A N YY   G+   +CDF+G A+I  TDPS
Subjt:  SGNLFAANANQKTWCVARPSSDKATLLANINYAC--SQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS

P52409 Glucan endo-1,3-beta-glucosidase3.7e-1444.16Show/hide
Query:  WCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS
        WCVA+  ++   L  NINYAC  VDC+ IQ G  C  P++L   AS  MN YY + G     CDF+G+ ++  +DPS
Subjt:  WCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS

Q84V39 Major pollen allergen Ole e 104.1e-1343.21Show/hide
Query:  KTWCVARPSSDKATLLANINYACSQ--VDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS
        K WCV +  +  A L +NI+Y CSQ  +DC  IQ    C  P+ +   AS AMN +Y S+G+N ++CDF G+  I  +DPS
Subjt:  KTWCVARPSSDKATLLANINYACSQ--VDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS

Q94G86 Glucan endo-1,3-beta-D-glucosidase3.3e-1546.84Show/hide
Query:  TWCVARPSSDKATLLANINYACSQ-VDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS
        +WCV +P      L  NINYAC Q +DC  IQ G  C  P+ +   A+  MNLYY S G+N WNCDF  +A +  T+PS
Subjt:  TWCVARPSSDKATLLANINYACSQ-VDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS

Q9ZU91 Glucan endo-1,3-beta-glucosidase 34.1e-1334.41Show/hide
Query:  SGNLFAANANQKTWCVARPSSDKATLLANINYAC--SQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSQ
        +G + A +   +T+C+A+   D+  L A +++AC   +VDC  + +G  C  PD+++  ++ A N YY   GK   +CDF+G A +  TDPS+
Subjt:  SGNLFAANANQKTWCVARPSSDKATLLANINYAC--SQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSQ

Arabidopsis top hitse value%identityAlignment
AT1G78520.1 Carbohydrate-binding X8 domain superfamily protein5.8e-3157.43Show/hide
Query:  LSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSQF
        L F  L    N    NA  KTWCVA+PSSD+  L  NIN+ACS VDCR++  GCPC  P NLIN AS+AMNLYY + G+N WNC+F+ S LI IT+PS  
Subjt:  LSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSQF

Query:  N
        N
Subjt:  N

AT2G43660.1 Carbohydrate-binding X8 domain superfamily protein1.3e-1743.43Show/hide
Query:  LLFLSGNLFAANA---NQKTWCVARPSSDKATLLANINYAC--SQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS
        L   SG+    NA    Q +WCVA+P +    L+ N+N  C  S V C ++  G  C  P NL N ASV MNLYY ++G+    CDF GS +I +TDPS
Subjt:  LLFLSGNLFAANA---NQKTWCVARPSSDKATLLANINYAC--SQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS

AT2G43670.1 Carbohydrate-binding X8 domain superfamily protein2.1e-2552.53Show/hide
Query:  FFLLFLSGNLF---AANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS
        F  L+  GN      A+ +   WCVA+PS+D   L  NIN+ACS++DC+II  G  C  PD++I+RASVAMNLYY ++G++ WNC+F GS LI ITDPS
Subjt:  FFLLFLSGNLF---AANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS

AT3G28250.1 Carbohydrate-binding X8 domain superfamily protein2.2e-2248.08Show/hide
Query:  WCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSQFNFCRKLIFVFALFLFVIFFFF
        WCVA+P +    L+ N+NYACS VDC+II     C  PDN+ N ASV MNLYY + G+N WNC+F  S L+ ITDPS+F     L+F + + ++V+FF  
Subjt:  WCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSQFNFCRKLIFVFALFLFVIFFFF

Query:  AAGY
         + Y
Subjt:  AAGY

AT4G09462.1 Carbohydrate-binding X8 domain superfamily protein3.3e-1843.4Show/hide
Query:  MAIKATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQ-VDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALI
        MA  ++ L+   + LS  +    A+ KTWC+A   +  A L ANIN+ACSQ VDCR IQ G  C  P+NL N AS  MN YY + G+    C F+ +   
Subjt:  MAIKATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQ-VDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALI

Query:  VITDPS
          TDPS
Subjt:  VITDPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCAAAGCAACCGCTCTCTCCTTCTTCCTTCTCTTCCTCTCAGGAAATCTCTTCGCAGCAAACGCAAATCAGAAGACGTGGTGCGTAGCGCGGCCGTCGTCCGA
CAAAGCGACGCTGTTGGCGAACATCAATTACGCCTGTTCGCAGGTGGATTGCAGGATAATCCAGAGAGGATGCCCCTGCTCTTATCCTGATAACTTGATCAACCGTGCTT
CGGTTGCTATGAATCTGTATTACCATTCCAGAGGGAAGAATCAGTGGAACTGTGATTTTCGAGGATCTGCTCTCATTGTCATTACCGATCCAAGTCAGTTCAATTTTTGC
AGGAAGTTGATTTTTGTTTTCGCTTTGTTTTTGTTTGTGATTTTTTTTTTTTTTGCTGCAGGTTATGGGAACTGCCTTTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
GTCGGCATCATGTGGCGCGTCCTTTTAGCTTCCTTGGATCTCCCCCACCGTCGTAACGGAAACGGCTACTCAATACTCCGTTTTATAGCCGTTACAATCCCCCACCTATA
AAACCCACCTCCGTTCTCCACTTTTCCCAATCCCCAAATCTCCACCTCCTCCTCCAATGGCGATCAAAGCAACCGCTCTCTCCTTCTTCCTTCTCTTCCTCTCAGGAAAT
CTCTTCGCAGCAAACGCAAATCAGAAGACGTGGTGCGTAGCGCGGCCGTCGTCCGACAAAGCGACGCTGTTGGCGAACATCAATTACGCCTGTTCGCAGGTGGATTGCAG
GATAATCCAGAGAGGATGCCCCTGCTCTTATCCTGATAACTTGATCAACCGTGCTTCGGTTGCTATGAATCTGTATTACCATTCCAGAGGGAAGAATCAGTGGAACTGTG
ATTTTCGAGGATCTGCTCTCATTGTCATTACCGATCCAAGTCAGTTCAATTTTTGCAGGAAGTTGATTTTTGTTTTCGCTTTGTTTTTGTTTGTGATTTTTTTTTTTTTT
GCTGCAGGTTATGGGAACTGCCTTTATCCTTGAATTGTTCAAGTAGCGGGATTTACTTTACTTAAAAGTTAAATTTCTTTGTTATTTTTTTTCTTCTTTTATTATTATCA
TGAAGTGTTTTTATAGAAAGTTGATTTTGTTTTTTTTTTTTAAGTTAACAAGTGAGAAGAGATGGAAATTGTATTCATGTGGAATGGTTATAAAAATGGATTAAATAGAT
TTTTCTT
Protein sequenceShow/hide protein sequence
MAIKATALSFFLLFLSGNLFAANANQKTWCVARPSSDKATLLANINYACSQVDCRIIQRGCPCSYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSQFNFC
RKLIFVFALFLFVIFFFFAAGYGNCLYP