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Sed0010450 (gene) of Chayote v1 genome

Gene IDSed0010450
OrganismSechium edule (Chayote v1)
Descriptionprotein TAPETUM DETERMINANT 1-like
Genome locationLG14:20189085..20190227
RNA-Seq ExpressionSed0010450
SyntenySed0010450
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-4270.25Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        MA F KLF+ LLFVSLL KGNC+C   +I ISQKM+GFQ+HGMTEW VTI+NNC CSQS VK DCKGFQ+T+SIDPSIL ++D ECLVNNG PIF S P+
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
         FTYA+DP+F+F  ISS+I+C
Subjt:  TFTYAKDPQFNFNPISSKISC

XP_008440637.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo]4.6e-4271.07Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        MA+  KL + LL +S +S GNC+C L NITISQKM+GFQ+HGMTEW VTI NNC CSQS +K DCKGF +T SIDPSIL ISD ECLVNNG PIFNS+PI
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
        TF YA+ P+FNF PISS+ISC
Subjt:  TFTYAKDPQFNFNPISSKISC

XP_022962948.1 uncharacterized protein At1g05835-like [Cucurbita moschata]1.4e-4171.07Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        MA  AKLF+ LLFVS LSK N +C L NITI Q M+GFQ+HGMTEW  T++NNC CSQS VK DC+GFQ+T+SIDP IL I+D ECLVNNG PIFNS PI
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
        TFTYA++PQFNF PISS+I+C
Subjt:  TFTYAKDPQFNFNPISSKISC

XP_031742370.1 uncharacterized protein At1g05835-like [Cucumis sativus]6.1e-4270.25Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        M +F KL + LL +SL+S GNC+C L NI ISQ M+GFQ+HGMTEWKVTI NNC CSQS +K DCKGF +T SIDPSIL ISD+ECLVNNG PIFNS+PI
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
        TF YA+ P+FNF P+SS+ISC
Subjt:  TFTYAKDPQFNFNPISSKISC

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]5.3e-4675.21Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        MA+F KL + LL +SL+S GNC+C L NITISQ+M+GFQ+HGMTEWKVTI+NNC CSQS VK DCKGFQ+TESIDPSIL + D ECLVNNG PIFNS PI
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
        TF+YA+DPQFNF PISS+ISC
Subjt:  TFTYAKDPQFNFNPISSKISC

TrEMBL top hitse value%identityAlignment
A0A0A0KLZ6 Uncharacterized protein2.9e-4270.25Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        M +F KL + LL +SL+S GNC+C L NI ISQ M+GFQ+HGMTEWKVTI NNC CSQS +K DCKGF +T SIDPSIL ISD+ECLVNNG PIFNS+PI
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
        TF YA+ P+FNF P+SS+ISC
Subjt:  TFTYAKDPQFNFNPISSKISC

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like2.2e-4271.07Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        MA+  KL + LL +S +S GNC+C L NITISQKM+GFQ+HGMTEW VTI NNC CSQS +K DCKGF +T SIDPSIL ISD ECLVNNG PIFNS+PI
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
        TF YA+ P+FNF PISS+ISC
Subjt:  TFTYAKDPQFNFNPISSKISC

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like2.2e-4271.07Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        MA+  KL + LL +S +S GNC+C L NITISQKM+GFQ+HGMTEW VTI NNC CSQS +K DCKGF +T SIDPSIL ISD ECLVNNG PIFNS+PI
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
        TF YA+ P+FNF PISS+ISC
Subjt:  TFTYAKDPQFNFNPISSKISC

A0A6J1HGA0 uncharacterized protein At1g05835-like6.5e-4271.07Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        MA  AKLF+ LLFVS LSK N +C L NITI Q M+GFQ+HGMTEW  T++NNC CSQS VK DC+GFQ+T+SIDP IL I+D ECLVNNG PIFNS PI
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
        TFTYA++PQFNF PISS+I+C
Subjt:  TFTYAKDPQFNFNPISSKISC

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like3.6e-4068.6Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        MA FAKLF+ LLFVSLL KGNC+C   +I I Q MSGFQ+HGMTEW VTI+N C CSQS VK DC+GFQ+T+SIDPS+L ++D+ECLVNNG PIF S  I
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKISC
        TFTYA DP+F+F  ISS+I+C
Subjt:  TFTYAKDPQFNFNPISSKISC

SwissProt top hitse value%identityAlignment
Q1G3T1 TPD1 protein homolog 11.4e-0428.57Show/hide
Query:  ECTLKNITISQKMSGFQMHGMTEWKVTINNNC--NCSQSLVKFDCKGFQSTESIDPSI---LDISDAECLVNNGNPIFNSQPITFTYAKDPQFNFNPISS
        +C+  +I + Q  +     G+  + V I N+C  +C+ + +   C  F S   ++P +   LD  D  CLVN+G P+   Q ++F YA    F++    +
Subjt:  ECTLKNITISQKMSGFQMHGMTEWKVTINNNC--NCSQSLVKFDCKGFQSTESIDPSI---LDISDAECLVNNGNPIFNSQPITFTYAKDPQFNFNPISS

Query:  KISCF
         +SCF
Subjt:  KISCF

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein1.8e-0425.21Show/hide
Query:  LFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNC-NCSQSLVKFDCKGFQSTESIDPS---ILDISDAECLVNNGNPIFNSQPITF
        L+S L  + L       C  K+   + + +  +     +++V + N C  C    ++  C+GF  +  +DP+   +L  S   C+VN+G P+   Q ++F
Subjt:  LFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNC-NCSQSLVKFDCKGFQSTESIDPS---ILDISDAECLVNNGNPIFNSQPITF

Query:  TYAKDPQFNFNPISSKISC
         Y+   QF   P+S    C
Subjt:  TYAKDPQFNFNPISSKISC

AT1G32583.1 FUNCTIONS IN: molecular_function unknown9.7e-0628.57Show/hide
Query:  ECTLKNITISQKMSGFQMHGMTEWKVTINNNC--NCSQSLVKFDCKGFQSTESIDPSI---LDISDAECLVNNGNPIFNSQPITFTYAKDPQFNFNPISS
        +C+  +I + Q  +     G+  + V I N+C  +C+ + +   C  F S   ++P +   LD  D  CLVN+G P+   Q ++F YA    F++    +
Subjt:  ECTLKNITISQKMSGFQMHGMTEWKVTINNNC--NCSQSLVKFDCKGFQSTESIDPSI---LDISDAECLVNNGNPIFNSQPITFTYAKDPQFNFNPISS

Query:  KISCF
         +SCF
Subjt:  KISCF

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.0e-1536.97Show/hide
Query:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI
        MA   K F V+L +S++S G C CT   I I    +G ++ G  EWKVT+ N CNC Q  V   C GF   + + P +L      CL+  G  +      
Subjt:  MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPI

Query:  TFTYAKDPQFNFNPISSKI
         FTYA  P + F P+ SK+
Subjt:  TFTYAKDPQFNFNPISSKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCTTCGCCAAACTATTTAGTGTCCTTCTCTTTGTTTCTCTTCTTTCCAAAGGAAATTGTGAATGTACATTGAAGAACATAACAATCAGCCAAAAAATGAGTGG
ATTTCAGATGCATGGAATGACAGAATGGAAAGTGACAATCAACAACAATTGCAATTGTTCTCAGTCATTAGTGAAGTTTGATTGCAAAGGATTTCAATCTACAGAAAGCA
TTGATCCCTCAATCTTGGACATTTCTGATGCTGAGTGTTTGGTCAACAATGGAAACCCTATTTTCAATTCCCAACCCATCACCTTCACTTATGCAAAAGACCCACAATTC
AATTTCAACCCAATTTCTTCCAAAATTTCTTGTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCTTCGCCAAACTATTTAGTGTCCTTCTCTTTGTTTCTCTTCTTTCCAAAGGAAATTGTGAATGTACATTGAAGAACATAACAATCAGCCAAAAAATGAGTGG
ATTTCAGATGCATGGAATGACAGAATGGAAAGTGACAATCAACAACAATTGCAATTGTTCTCAGTCATTAGTGAAGTTTGATTGCAAAGGATTTCAATCTACAGAAAGCA
TTGATCCCTCAATCTTGGACATTTCTGATGCTGAGTGTTTGGTCAACAATGGAAACCCTATTTTCAATTCCCAACCCATCACCTTCACTTATGCAAAAGACCCACAATTC
AATTTCAACCCAATTTCTTCCAAAATTTCTTGTTTTTAA
Protein sequenceShow/hide protein sequence
MALFAKLFSVLLFVSLLSKGNCECTLKNITISQKMSGFQMHGMTEWKVTINNNCNCSQSLVKFDCKGFQSTESIDPSILDISDAECLVNNGNPIFNSQPITFTYAKDPQF
NFNPISSKISCF