; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0010458 (gene) of Chayote v1 genome

Gene IDSed0010458
OrganismSechium edule (Chayote v1)
DescriptionCondensin complex subunit 2
Genome locationLG05:7466800..7469515
RNA-Seq ExpressionSed0010458
SyntenySed0010458
Gene Ontology termsGO:0007076 - mitotic chromosome condensation (biological process)
GO:0000796 - condensin complex (cellular component)
InterPro domainsIPR022816 - Condensin complex subunit 2/barren


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604872.1 Condensin complex subunit 2, partial [Cucurbita argyrosperma subsp. sororia]6.1e-5952.55Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +AT+LLPREDP+  LDK QILELFQNCIK ASENKINQKNTWEL+LIDHLTEI  VEEEDT+  F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F SDEVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        SCE+R++++DMIDISFA+DCIE+M+ NMRVKDEISPTLRNI+NLFDEDNKRP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

KAG7034982.1 Condensin complex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-5952.55Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +AT+LLPREDP+  LDK QILELFQNCIK ASENKINQKNTWEL+LIDHLTEI  VEEEDT+  F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F SDEVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        SCE+R++++DMIDISFA+DCIE+M+ NMRVKDEISPTLRNI+NLFDEDNKRP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

XP_022140317.1 condensin complex subunit 2 [Momordica charantia]4.5e-6254.51Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +ATSLLPRE+P+ CLDK QILELFQNCIK ASENKINQKNTWEL+LIDHLTE+  VEEEDT+  F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F S+EVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        SCENR+DSSDMIDISFARDCIEEM+LNMRVKDEISPTLRNI+NLFDEDN+RP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

XP_022947155.1 condensin complex subunit 2 [Cucurbita moschata]2.7e-5952.94Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +AT+LLPREDP+  LDK QILELFQNCIK ASENKINQKNTWEL+LIDHLTEI  VEEEDT+  F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F SDEVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        SCE+R++++DMIDISFA+DCIEEM+ NMRVKDEISPTLRNI+NLFDEDNKRP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

XP_023534556.1 condensin complex subunit 2 [Cucurbita pepo subsp. pepo]6.1e-5952.94Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +AT+LLPREDP+  LDK QILELFQNCIK ASENKINQKNTWEL+LIDHLTEI  VEEEDT+  F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F SDEVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        SCE+R +++DMIDISFA+DCIEEM+ NMRVKDEISPTLRNI+NLFDEDNKRP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

TrEMBL top hitse value%identityAlignment
A0A5A7SUZ7 Condensin complex subunit 27.2e-5852.94Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +AT+LLPREDP+  LDK QILELFQNCIK ASENKINQKNTWEL+LIDHL EI  VEEEDT+  F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F SDEVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        S ENR  SSDMIDISFA+DCI+EM+LNMRVKDEISPTLRNI+NLFDEDN RP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

A0A5D3CCN8 Condensin complex subunit 27.2e-5852.94Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +AT+LLPREDP+  LDK QILELFQNCIK ASENKINQKNTWEL+LIDHL EI  VEEEDT+  F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F SDEVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        S ENR  SSDMIDISFA+DCI+EM+LNMRVKDEISPTLRNI+NLFDEDN RP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

A0A6J1CGH9 Condensin complex subunit 22.2e-6254.51Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +ATSLLPRE+P+ CLDK QILELFQNCIK ASENKINQKNTWEL+LIDHLTE+  VEEEDT+  F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F S+EVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        SCENR+DSSDMIDISFARDCIEEM+LNMRVKDEISPTLRNI+NLFDEDN+RP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

A0A6J1G622 Condensin complex subunit 21.3e-5952.94Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +AT+LLPREDP+  LDK QILELFQNCIK ASENKINQKNTWEL+LIDHLTEI  VEEEDT+  F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F SDEVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        SCE+R++++DMIDISFA+DCIEEM+ NMRVKDEISPTLRNI+NLFDEDNKRP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

A0A6J1I5E9 Condensin complex subunit 23.8e-5952.94Show/hide
Query:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----
        +AT+LLPREDP+  LDK QILELFQNCIK ASENKINQKNTWEL+LIDHLTEI  VEEEDT   F ++                        + GG    
Subjt:  MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSG-----------------------ICGG----

Query:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL
                                           S+L S                       SAQFDEGGAKGL MNNLGVYGACRV F SDEVPGKC+
Subjt:  -----------------------------------SSLPS----------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCL

Query:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY
        SCE+R++++DMIDISFA+DCIEEM+ NMRVKDEISPTLRNI+NLFDEDNKRP DY
Subjt:  SCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDY

SwissProt top hitse value%identityAlignment
O13067 Condensin complex subunit 24.4e-0438.46Show/hide
Query:  TSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFR
        TSLLP+      L+  QI + +  CIK + ENKI  KN + LHLID++ +I  ++ +D++   F+
Subjt:  TSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFR

Q15003 Condensin complex subunit 24.4e-0444.9Show/hide
Query:  QILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFR
        QI E +  CIK ++ENKI  KN + LHLID ++EI  ++++DT+   F+
Subjt:  QILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFR

Q564K3 Condensin complex subunit 21.8e-4543.55Show/hide
Query:  PREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSGIC----------------------------------G
        P  + D C DK QILELFQNCIK ASENKINQKNTWEL+LIDHL EI  VE+E+     F+   C                                  G
Subjt:  PREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSGIC----------------------------------G

Query:  G--------------------------SSL-PS---------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCLSCENRNDS
        G                          S+L PS                      SAQFDEGGAKGL +NNLGVYG C+V F S E+PGK +S  N++D 
Subjt:  G--------------------------SSL-PS---------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCLSCENRNDS

Query:  SDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDYF
        S+ ID+SF ++C+E+M+LNMR KDEI P+LR IIN FDE+N+RP D F
Subjt:  SDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDYF

Q8C156 Condensin complex subunit 27.6e-0444.9Show/hide
Query:  QILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFR
        QI E +  CIK +SENKI  KN + LHLID ++EI  ++++D +   F+
Subjt:  QILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFR

Arabidopsis top hitse value%identityAlignment
AT2G32590.1 LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).1.3e-4643.55Show/hide
Query:  PREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSGIC----------------------------------G
        P  + D C DK QILELFQNCIK ASENKINQKNTWEL+LIDHL EI  VE+E+     F+   C                                  G
Subjt:  PREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSGIC----------------------------------G

Query:  G--------------------------SSL-PS---------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCLSCENRNDS
        G                          S+L PS                      SAQFDEGGAKGL +NNLGVYG C+V F S E+PGK +S  N++D 
Subjt:  G--------------------------SSL-PS---------------------PSAQFDEGGAKGLFMNNLGVYGACRVFFYSDEVPGKCLSCENRNDS

Query:  SDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDYF
        S+ ID+SF ++C+E+M+LNMR KDEI P+LR IIN FDE+N+RP D F
Subjt:  SDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCAGTCTGCTACCTCGCGAAGATCCCGATGGATGCCTCGACAAGCCGCAGATCCTCGAATTATTTCAGAATTGCATCAAATTCGCTAGTGAAAATAAAATTAA
TCAGAAGAATACATGGGAGCTGCATTTGATTGATCATCTTACTGAGATTGCTGTGGTTGAAGAAGAGGATACACAGAGACAATTTTTCAGAAGTGGCATTTGTGGTGGAT
CCTCTTTACCATCACCATCTGCTCAGTTTGATGAGGGTGGAGCCAAGGGCCTGTTTATGAATAATCTTGGAGTATATGGTGCATGTAGGGTGTTTTTTTATTCAGATGAA
GTGCCTGGGAAATGTTTGTCTTGTGAGAATAGAAACGATAGCTCTGATATGATTGATATCTCTTTTGCCAGAGATTGCATCGAGGAGATGATATTGAATATGCGGGTGAA
AGATGAAATATCACCAACTTTAAGGAATATAATCAATCTATTTGATGAAGATAACAAACGACCTCCTGATTATTTCGTGAAAAAGGGGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCAGTCTGCTACCTCGCGAAGATCCCGATGGATGCCTCGACAAGCCGCAGATCCTCGAATTATTTCAGAATTGCATCAAATTCGCTAGTGAAAATAAAATTAA
TCAGAAGAATACATGGGAGCTGCATTTGATTGATCATCTTACTGAGATTGCTGTGGTTGAAGAAGAGGATACACAGAGACAATTTTTCAGAAGTGGCATTTGTGGTGGAT
CCTCTTTACCATCACCATCTGCTCAGTTTGATGAGGGTGGAGCCAAGGGCCTGTTTATGAATAATCTTGGAGTATATGGTGCATGTAGGGTGTTTTTTTATTCAGATGAA
GTGCCTGGGAAATGTTTGTCTTGTGAGAATAGAAACGATAGCTCTGATATGATTGATATCTCTTTTGCCAGAGATTGCATCGAGGAGATGATATTGAATATGCGGGTGAA
AGATGAAATATCACCAACTTTAAGGAATATAATCAATCTATTTGATGAAGATAACAAACGACCTCCTGATTATTTCGTGAAAAAGGGGTTATAA
Protein sequenceShow/hide protein sequence
MATSLLPREDPDGCLDKPQILELFQNCIKFASENKINQKNTWELHLIDHLTEIAVVEEEDTQRQFFRSGICGGSSLPSPSAQFDEGGAKGLFMNNLGVYGACRVFFYSDE
VPGKCLSCENRNDSSDMIDISFARDCIEEMILNMRVKDEISPTLRNIINLFDEDNKRPPDYFVKKGL