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Sed0010480 (gene) of Chayote v1 genome

Gene IDSed0010480
OrganismSechium edule (Chayote v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR4
Genome locationLG02:44591363..44592019
RNA-Seq ExpressionSed0010480
SyntenySed0010480
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580535.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2784.21Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREAC
        MEAKQ  +NYEEECSTPTRWECRIPA   CPPPPPPKKKK  A S GKKR+PPK+GYFQPPDLEALFSVPPRREAC
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREAC

XP_022983341.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucurbita maxima]2.1e-2785.53Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREAC
        MEAKQ  +NYEEECSTPTRWECRIPA   CPPPPPP KKKKA GS GKKR+PPK+GYFQPPDLEALFSVPPRREAC
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREAC

XP_023528630.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucurbita pepo subsp. pepo]1.6e-2784.21Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREAC
        MEAKQ  +NYEEECSTPTRWECRIPA   CPPPPPPKKKK  A S GKKR+PPK+GYFQPPDLEALFSVPPRREAC
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREAC

XP_031737830.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucumis sativus]4.8e-2475.32Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA
        M++KQ + NYEEECSTPTRWECRIPA   CPPPP   KKK A  + GKKR+PPK+GYFQPPDLEALFS+PPRREACA
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA

XP_038905412.1 cyclin-dependent protein kinase inhibitor SMR4 [Benincasa hispida]8.7e-2679.22Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA
        MEAKQ  +NYEEECSTPTRWECRIPA   CPPPP     KK  G+ GKKRDPPK+GYFQPPDLEALFSVPPRREACA
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA

TrEMBL top hitse value%identityAlignment
A0A0A0LAJ2 Uncharacterized protein2.3e-2475.32Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA
        M++KQ + NYEEECSTPTRWECRIPA   CPPPP   KKK A  + GKKR+PPK+GYFQPPDLEALFS+PPRREACA
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA

A0A444EEY5 Uncharacterized protein8.8e-1660.76Show/hide
Query:  MEAKQESSNYEEE--CSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA
        ME + E++   E     TP R ECRIPAA+ CPPPP   +KK  A + GK+RDPPKNGYF PPDLEALF++ PRREACA
Subjt:  MEAKQESSNYEEE--CSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA

A0A4S8JH02 Uncharacterized protein4.4e-1560.76Show/hide
Query:  MEAKQESSNYEEE--CSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA
        ME + E+S   E     TP R ECRIPAA  CP PP   +KK  A + GK+RDPPKNGYF PPDLEALF++ PRREACA
Subjt:  MEAKQESSNYEEE--CSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA

A0A6I9QCR9 cyclin-dependent protein kinase inhibitor SMR4-like1.5e-1562.82Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREA-CA
        ME  +E     E   TP R ECRIPA L CPPPP   KKK  AG++GK+RDPPKNGYF PPDLEALF++ P REA CA
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREA-CA

A0A6J1J1Y0 cyclin-dependent protein kinase inhibitor SMR41.0e-2785.53Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREAC
        MEAKQ  +NYEEECSTPTRWECRIPA   CPPPPPP KKKKA GS GKKR+PPK+GYFQPPDLEALFSVPPRREAC
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREAC

SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR45.1e-1355.84Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA
        +E K E +  EE C+TP     RIP A  CPPPP    +KK    + +KRDPP+NGYFQPPDLE LF   PRREACA
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA

Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR54.3e-1253.73Show/hide
Query:  NYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREA
        +Y+  C+TPTR +CRIPA    PP PPP ++K++    GKKR+PPK GYFQPPDL+  FSV    +A
Subjt:  NYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREA

Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein3.6e-1455.84Show/hide
Query:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA
        +E K E +  EE C+TP     RIP A  CPPPP    +KK    + +KRDPP+NGYFQPPDLE LF   PRREACA
Subjt:  MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAAAACAGGAGAGTTCGAATTACGAGGAGGAGTGTTCGACGCCGACCCGGTGGGAGTGTCGGATCCCAGCGGCGTTGGAGTGTCCGCCGCCGCCACCGCCGAA
GAAGAAGAAGAAGGCGGCCGGAAGTATTGGGAAGAAGCGGGACCCGCCGAAGAATGGGTATTTTCAGCCGCCTGATCTTGAGGCTCTGTTTTCTGTTCCTCCCAGAAGGG
AAGCCTGTGCTAATTAG
mRNA sequenceShow/hide mRNA sequence
TCCTCCGCCGCCGCCGCTCGCCACCGTCCACGGCGGCTCTCCTACCGGAGTTTCAAAATTCCCCCGCCGGTTACGACTCAGAGAGTACTTTCCATGGAGGCAAAACAGGA
GAGTTCGAATTACGAGGAGGAGTGTTCGACGCCGACCCGGTGGGAGTGTCGGATCCCAGCGGCGTTGGAGTGTCCGCCGCCGCCACCGCCGAAGAAGAAGAAGAAGGCGG
CCGGAAGTATTGGGAAGAAGCGGGACCCGCCGAAGAATGGGTATTTTCAGCCGCCTGATCTTGAGGCTCTGTTTTCTGTTCCTCCCAGAAGGGAAGCCTGTGCTAATTAG
TAATTACTTTAGTTAAGGCTCTGTTTTAGGCTTCTAAGAGTGGTATTTTTTTTTATTTTTAATATTCTGATTAGATTGTGTGTGTTTAATTGTCTATACAATCTTAGGGG
TTGTTGATTTTAGAGTGGGTTATTGAAGCTTTAATGGAATTTAAAACAGAGAGTGGATTTGCAAGTTTTGTTTTTGTTTGTTAGAGTCTGAATTTGAAATGAAAGAATCT
TGTGCTCAGTTGTTTCCTTTTTTTTTGCCGTTTCTGTTTTTCTAATGACGTTTGCATTAATTATGATGTTTGATTCAAGGAATACAATTTCTTTTTATGAGTTCAAG
Protein sequenceShow/hide protein sequence
MEAKQESSNYEEECSTPTRWECRIPAALECPPPPPPKKKKKAAGSIGKKRDPPKNGYFQPPDLEALFSVPPRREACAN