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Sed0010487 (gene) of Chayote v1 genome

Gene IDSed0010487
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L35a-1-like
Genome locationLG14:877782..881448
RNA-Seq ExpressionSed0010487
SyntenySed0010487
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR018266 - Ribosomal protein L35Ae, conserved site
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442180.1 PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo]1.8e-5696.43Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

XP_011653915.1 60S ribosomal protein L35a-1 [Cucumis sativus]6.8e-5695.54Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

XP_022928725.1 60S ribosomal protein L35a-1-like [Cucurbita moschata]8.0e-5797.32Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

XP_022967923.1 60S ribosomal protein L35a-1-like [Cucurbita maxima]3.0e-5696.43Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

XP_038883794.1 60S ribosomal protein L35a-1-like [Benincasa hispida]5.2e-5696.43Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

TrEMBL top hitse value%identityAlignment
A0A1S3B4N4 60S ribosomal protein L35a-1-like8.6e-5796.43Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

A0A5A7TGR3 60S ribosomal protein L35a-1-like8.6e-5796.43Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

A0A6J1EL43 60S ribosomal protein L35a-1-like3.9e-5797.32Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGSQGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

A0A6J1HSC2 60S ribosomal protein L35a-1-like5.6e-5697.32Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKGS+GERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DKVRVFMYPSNI
Subjt:  DKVRVFMYPSNI

A0A6J1HTF7 60S ribosomal protein L35a-1-like1.5e-5696.43Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNG+HYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

SwissProt top hitse value%identityAlignment
P41056 60S ribosomal protein L33-B4.8e-2856.19Show/hide
Query:  ERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFM
        E  RLYV+G  L Y+RSK    P  SLI+IEGV T +E  +Y GKR+AY+Y+A  +  GS  R +WGKV+R HGNSG+VRA F++NLP K+ G  VR+F+
Subjt:  ERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFM

Query:  YPSNI
        YPSNI
Subjt:  YPSNI

P51422 60S ribosomal protein L35a-41.2e-5286.49Show/hide
Query:  VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KG QGERVRLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NGSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KVRVFMYPSNI
        +VRVFMYPSNI
Subjt:  KVRVFMYPSNI

Q9C912 60S ribosomal protein L35a-38.6e-5486.61Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERVRLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NGSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
         +VRVFMYPSNI
Subjt:  DKVRVFMYPSNI

Q9FZH0 60S ribosomal protein L35a-29.5e-5387.39Show/hide
Query:  VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KG QGERVRLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NGSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KVRVFMYPSNI
        +VRVFMYPSNI
Subjt:  KVRVFMYPSNI

Q9LMK0 60S ribosomal protein L35a-18.6e-5485.71Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERVRLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NGSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
         +VRVFMYPSNI
Subjt:  DKVRVFMYPSNI

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein6.1e-5585.71Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERVRLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NGSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
         +VRVFMYPSNI
Subjt:  DKVRVFMYPSNI

AT1G41880.1 Ribosomal protein L35Ae family protein6.8e-5487.39Show/hide
Query:  VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KG QGERVRLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NGSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KVRVFMYPSNI
        +VRVFMYPSNI
Subjt:  KVRVFMYPSNI

AT1G74270.1 Ribosomal protein L35Ae family protein6.1e-5586.61Show/hide
Query:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG
        MVKG QGERVRLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NGSHYRCIWGKV+RPHGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
         +VRVFMYPSNI
Subjt:  DKVRVFMYPSNI

AT3G55750.1 Ribosomal protein L35Ae family protein8.8e-5486.49Show/hide
Query:  VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD
        +KG QGERVRLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NGSHYRCIWGKV+RPHGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGD

Query:  KVRVFMYPSNI
        +VRVFMYPSNI
Subjt:  KVRVFMYPSNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGGAAGCCAGGGAGAAAGAGTCAGACTCTACGTCAGAGGAACGGTCCTTGGCTACAAGAGGTCGAAGTCAAACCAGTATCCTAGGACGTCGCTGATTCAGAT
TGAAGGTGTGAATACCAAGGAAGAGGTTGCATGGTATGCTGGAAAACGTTTGGCATACATTTACAAGGCTAAAGTGAAGCAGAATGGATCTCACTATCGATGCATTTGGG
GCAAGGTATCCAGGCCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCGAACTTGCCCCCAAAATCCATGGGTGATAAAGTTAGGGTATTTATGTACCCCAGC
AATATCTAA
mRNA sequenceShow/hide mRNA sequence
ATTTATAATTAAAAAGAAAAAAAGAAAAAGAAAAAAAAATCATGGTACTAGCATCGATAGAGAAACCCTAGAAGAAGTGCTTTAAATCAAATCATTATAAAGGTTTCCAC
TTCTCCAAGCGGCCACCTCCCCTCCGAGACGCAGCTCCATCTTCCTCGCACTCCAACCTTGCAAATCTCAGTCTGCGGCAGCCATGGTGAAGGGAAGCCAGGGAGAAAGA
GTCAGACTCTACGTCAGAGGAACGGTCCTTGGCTACAAGAGGTCGAAGTCAAACCAGTATCCTAGGACGTCGCTGATTCAGATTGAAGGTGTGAATACCAAGGAAGAGGT
TGCATGGTATGCTGGAAAACGTTTGGCATACATTTACAAGGCTAAAGTGAAGCAGAATGGATCTCACTATCGATGCATTTGGGGCAAGGTATCCAGGCCTCATGGTAACA
GTGGCATTGTTCGAGCTAAGTTCAAGTCGAACTTGCCCCCAAAATCCATGGGTGATAAAGTTAGGGTATTTATGTACCCCAGCAATATCTAAGTTGCTCTGATCAGCTAG
CTAGAGATCAGGTTTCATTTCTTTGTTGACTTGGATGAATTGATATTTTTCTTTTAGTTTCTTCTTCCTTCTGGACAATGTTTAGATGATGATGTTTACATGTAAAACTT
AGACTTTATTTTGAATGTTCATTATGGAGTTTTCTTTCAATTTTGACTGAGTTTCATATCAAGGTTTAGTAACAATGGATGTACTCACTTGCATTTACAGGATCAGTCTG
AGAATATTGATAAAGTGATGTGGGTCGGATTATGTGGAAAAATCATAATAAACATAGAAAATTATACAGAATTCCTATAATGGTGTTAAAACAGTTGTACAGTGACGACT
ATCAACATGTATTAAGCCCATAAAGGGTAGAAATCTATGAATTATTTTTTAAATCCATGAAGTTGC
Protein sequenceShow/hide protein sequence
MVKGSQGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGSHYRCIWGKVSRPHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPS
NI