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Sed0010495 (gene) of Chayote v1 genome

Gene IDSed0010495
OrganismSechium edule (Chayote v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Genome locationLG14:23182225..23184976
RNA-Seq ExpressionSed0010495
SyntenySed0010495
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658221.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]4.4e-3283.67Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQ
        MSSAAAMAARSAFRSTL RA +SGRF + AK  KS+ SPFAIPKQNPLSQSHRILRSPVE+SCC+ESLLPYHS TASALLTSMLSVSRR+Y WT EGQ
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQ

XP_022926140.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata]7.5e-3284.54Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG
        MSSAAAMAARSAFRSTL RA +S R  NGAK  KS +SPF+IPKQNPLSQSHRILRSPVEMSCCVESLLPYHS TASALLTSMLSVSRR+Y WT EG
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG

XP_022926141.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]2.0e-3284.69Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQ
        MSSAAAMAARSAFRSTL RA +S R  NGAK  KS +SPF+IPKQNPLSQSHRILRSPVEMSCCVESLLPYHS TASALLTSMLSVSRR+Y WT EGQ
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQ

XP_022926145.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5 [Cucurbita moschata]7.5e-3284.54Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG
        MSSAAAMAARSAFRSTL RA +S R  NGAK  KS +SPF+IPKQNPLSQSHRILRSPVEMSCCVESLLPYHS TASALLTSMLSVSRR+Y WT EG
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG

XP_022978782.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]7.5e-3284.54Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG
        MSSAAAMAARSAFRSTL RA +S R  NGAK  KS +SPF+IPKQNPLSQSHRILRSPVEMSCCVESLLPYHS TASALLTSMLSVSRR+Y WT EG
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG

TrEMBL top hitse value%identityAlignment
A0A0A0KHP8 Uncharacterized protein1.2e-3870.27Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQVA
        MSSAAAMAARSAFRSTL RA +SGRF + AK  KS+ SPFAIPKQNPLSQSHRILRSPVE+SCC+ESLLPYHS TASALLTSMLSVSRR+Y WT E    
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQVA

Query:  YEFSFSLFTDGI---------SFSNMTRMMLISSTTQIAMMMYDECRM
         E +   F   +         S SN T M+LISSTTQIAMMMYDE RM
Subjt:  YEFSFSLFTDGI---------SFSNMTRMMLISSTTQIAMMMYDECRM

A0A6J1EE17 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X29.6e-3384.69Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQ
        MSSAAAMAARSAFRSTL RA +S R  NGAK  KS +SPF+IPKQNPLSQSHRILRSPVEMSCCVESLLPYHS TASALLTSMLSVSRR+Y WT EGQ
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQ

A0A6J1IM12 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X13.6e-3284.54Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG
        MSSAAAMAARSAFRSTL RA +S R  NGAK  KS +SPF+IPKQNPLSQSHRILRSPVEMSCCVESLLPYHS TASALLTSMLSVSRR+Y WT EG
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG

A0A6J1IM18 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X53.6e-3284.54Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG
        MSSAAAMAARSAFRSTL RA +S R  NGAK  KS +SPF+IPKQNPLSQSHRILRSPVEMSCCVESLLPYHS TASALLTSMLSVSRR+Y WT EG
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG

A0A6J1IR78 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X39.6e-3384.69Show/hide
Query:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQ
        MSSAAAMAARSAFRSTL RA +S R  NGAK  KS +SPF+IPKQNPLSQSHRILRSPVEMSCCVESLLPYHS TASALLTSMLSVSRR+Y WT EGQ
Subjt:  MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQ

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.4e-0950Show/hide
Query:  SSAAAMAARSAFRSTLGR--AAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAW
        +SA    ARS  R+   R  AA +GRFA+ AK+A       A  +++PL      LR+PVE+S CVESLLPYHS TASAL+TS LS+S + Y W
Subjt:  SSAAAMAARSAFRSTLGR--AAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAW

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.6e-1657.61Show/hide
Query:  AARSAFRSTLGRAAVSG-RFANGAKAAKSSS-SPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG
        AARS FRS   RA+ +  RF+ G K   SS+ + F +PKQ+PL  ++RI RSPVE+SCCVE++LPYH+ TASALL SMLSVSRR   W  +G
Subjt:  AARSAFRSTLGRAAVSG-RFANGAKAAKSSS-SPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG

AT1G28395.2 unknown protein1.6e-1657.61Show/hide
Query:  AARSAFRSTLGRAAVSG-RFANGAKAAKSSS-SPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG
        AARS FRS   RA+ +  RF+ G K   SS+ + F +PKQ+PL  ++RI RSPVE+SCCVE++LPYH+ TASALL SMLSVSRR   W  +G
Subjt:  AARSAFRSTLGRAAVSG-RFANGAKAAKSSS-SPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG

AT1G28395.3 unknown protein1.6e-1657.61Show/hide
Query:  AARSAFRSTLGRAAVSG-RFANGAKAAKSSS-SPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG
        AARS FRS   RA+ +  RF+ G K   SS+ + F +PKQ+PL  ++RI RSPVE+SCCVE++LPYH+ TASALL SMLSVSRR   W  +G
Subjt:  AARSAFRSTLGRAAVSG-RFANGAKAAKSSS-SPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG

AT2G33847.1 unknown protein3.3e-1760.92Show/hide
Query:  AARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWT
        AARS FRS +GRAAV+    +      S+ S F +PKQ+PL  SHRI RSPVE+SCCVE++LPYH+ TASALL SMLSVS R+  WT
Subjt:  AARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWT

AT2G33847.2 unknown protein6.6e-1860Show/hide
Query:  AARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG
        AARS FRS +GRAAV+    +      S+ S F +PKQ+PL  SHRI RSPVE+SCCVE++LPYH+ TASALL SMLSVS R+  WT +G
Subjt:  AARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGCAGCCATGGCCGCTAGGTCAGCTTTCAGATCAACCCTAGGCCGAGCCGCCGTCTCCGGCAGATTCGCCAACGGCGCCAAAGCCGCGAAATCATCTTC
GTCTCCGTTCGCCATCCCCAAGCAGAATCCACTCTCCCAATCTCATCGCATTTTGAGGTCTCCTGTTGAGATGAGTTGCTGTGTTGAATCGTTGCTTCCTTACCACTCTG
TTACTGCCTCTGCGTTGCTTACTTCTATGCTTTCTGTCTCTCGTCGGAACTACGCTTGGACTTGTGAAGGTCAAGTTGCCTATGAATTTTCTTTTTCTTTGTTCACTGAT
GGCATTAGTTTTAGTAACATGACAAGGATGATGTTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGATGAATGTCGGATGGACTTATCTAAGATGGATGATTA
CGGTCTCTTGAGATGCGGTGCATCGGTCGTAGTTTCGAGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGCCGCAGCCATGGCCGCTAGGTCAGCTTTCAGATCAACCCTAGGCCGAGCCGCCGTCTCCGGCAGATTCGCCAACGGCGCCAAAGCCGCGAAATCATCTTC
GTCTCCGTTCGCCATCCCCAAGCAGAATCCACTCTCCCAATCTCATCGCATTTTGAGGTCTCCTGTTGAGATGAGTTGCTGTGTTGAATCGTTGCTTCCTTACCACTCTG
TTACTGCCTCTGCGTTGCTTACTTCTATGCTTTCTGTCTCTCGTCGGAACTACGCTTGGACTTGTGAAGGTCAAGTTGCCTATGAATTTTCTTTTTCTTTGTTCACTGAT
GGCATTAGTTTTAGTAACATGACAAGGATGATGTTGATTTCTTCTACCACTCAGATTGCAATGATGATGTATGATGAATGTCGGATGGACTTATCTAAGATGGATGATTA
CGGTCTCTTGAGATGCGGTGCATCGGTCGTAGTTTCGAGAATTTGA
Protein sequenceShow/hide protein sequence
MSSAAAMAARSAFRSTLGRAAVSGRFANGAKAAKSSSSPFAIPKQNPLSQSHRILRSPVEMSCCVESLLPYHSVTASALLTSMLSVSRRNYAWTCEGQVAYEFSFSLFTD
GISFSNMTRMMLISSTTQIAMMMYDECRMDLSKMDDYGLLRCGASVVVSRI