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Sed0010504 (gene) of Chayote v1 genome

Gene IDSed0010504
OrganismSechium edule (Chayote v1)
DescriptionPeptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase isoform 1
Genome locationLG10:37024743..37025437
RNA-Seq ExpressionSed0010504
SyntenySed0010504
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588645.1 hypothetical protein SDJN03_17210, partial [Cucurbita argyrosperma subsp. sororia]7.4e-4072.18Show/hide
Query:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA
        MS PVDQ QPPP   A+HPA GSVGPVI VLAVISILG IAG+IGR+CFGRPVFGY AHYDV+DWV+KKCA+CLDGSLD  PPP LRPP  PP+EA+ V+
Subjt:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA

Query:  ----EPPETKQGGDA----ENLQSVPPGSGGES
            EPP  K+GGD     ENLQSV PGSGGES
Subjt:  ----EPPETKQGGDA----ENLQSVPPGSGGES
KAG7011671.1 hypothetical protein SDJN02_26577, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3871.21Show/hide
Query:  MSFPVDQFQPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPP----TPPLEAVTV
        MS PVDQ QPPP  H  HGSVGPVI VLAVISILGVIAG+IGRLC GRPVFGY AHYDV++WV+KKCASCLDGSLD  PPP   PPP     PPL+AV V
Subjt:  MSFPVDQFQPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPP----TPPLEAVTV

Query:  AE----PPETKQGGD--AENLQSVPPGSGGES
         E    PPE KQG D   ENLQS  PG+GGES
Subjt:  AE----PPETKQGGD--AENLQSVPPGSGGES
XP_022927713.1 uncharacterized protein LOC111434531 [Cucurbita moschata]6.3e-3971.43Show/hide
Query:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA
        MS P+DQ QPPP   A+HPA GSVGPVI VLAVISILG IAG+IGR+CFGRPVFGY A YDV+DWV+KKCASCLDGSLD  PPP LRPP  PP+EA+ V+
Subjt:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA

Query:  E----PPETKQGGDA----ENLQSVPPGSGGES
        E    PP  K+GGD     ENLQSV PGSGGES
Subjt:  E----PPETKQGGDA----ENLQSVPPGSGGES
XP_022989510.1 uncharacterized protein LOC111486567 [Cucurbita maxima]8.8e-4172.93Show/hide
Query:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA
        MS P+DQ QPPP   A+HPA GSVGPVI VLAVISILG IAG+IGR+CFGRPVFGY AHYDV+DWV+KKCA+CLDGSLD  PPPLLRPP  PP+EA+ VA
Subjt:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA

Query:  E----PPETKQGGDA----ENLQSVPPGSGGES
        E    PP  K+ GD     ENLQSVPPGSGGES
Subjt:  E----PPETKQGGDA----ENLQSVPPGSGGES
XP_023530142.1 uncharacterized protein LOC111792788 [Cucurbita pepo subsp. pepo]5.7e-4072.18Show/hide
Query:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA
        MS P+DQ QPPP   A+HPA GSVGPVI VLAVISILG IAG+IGR+CFGRPVFGY AHYDV+DWV+KKCASCLDGSLD  PPP LRPP  PP+EA+ VA
Subjt:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA

Query:  E----PPETKQGGDA------ENLQSVPPGSGG
        E    PP  K+GGD       ENLQSVPPGSGG
Subjt:  E----PPETKQGGDA------ENLQSVPPGSGG
TrEMBL top hitse value%identityAlignment
A0A1S3C1T9 type IV secretion system protein virB10-like1.5e-3868.66Show/hide
Query:  MSFPVDQFQPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPP---PTPPLEAVTVA
        MS P+DQ QPPP +H +H SVGP+I VLAVISILGVIAG+IGRLC GRPVFGY AHYDV+DWV+KKCASCLDGSLD  PPP   PP     PPL++V VA
Subjt:  MSFPVDQFQPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPP---PTPPLEAVTVA

Query:  E-----PPETKQGGDA----ENLQSVPPGSGGES
        E     PPE KQG DA    ENLQS  PG+GGES
Subjt:  E-----PPETKQGGDA----ENLQSVPPGSGGES
A0A5A7SPN0 Type IV secretion system protein virB10-like1.5e-3868.66Show/hide
Query:  MSFPVDQFQPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPP---PTPPLEAVTVA
        MS P+DQ QPPP +H +H SVGP+I VLAVISILGVIAG+IGRLC GRPVFGY AHYDV+DWV+KKCASCLDGSLD  PPP   PP     PPL++V VA
Subjt:  MSFPVDQFQPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPP---PTPPLEAVTVA

Query:  E-----PPETKQGGDA----ENLQSVPPGSGGES
        E     PPE KQG DA    ENLQS  PG+GGES
Subjt:  E-----PPETKQGGDA----ENLQSVPPGSGGES
A0A6J1ELS6 uncharacterized protein LOC1114345313.0e-3971.43Show/hide
Query:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA
        MS P+DQ QPPP   A+HPA GSVGPVI VLAVISILG IAG+IGR+CFGRPVFGY A YDV+DWV+KKCASCLDGSLD  PPP LRPP  PP+EA+ V+
Subjt:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA

Query:  E----PPETKQGGDA----ENLQSVPPGSGGES
        E    PP  K+GGD     ENLQSV PGSGGES
Subjt:  E----PPETKQGGDA----ENLQSVPPGSGGES
A0A6J1IBA8 uncharacterized protein LOC1114709401.3e-3771.65Show/hide
Query:  MSFPVDQFQPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPL-LRPPPTPPLEAVTVAE-
        MS P DQ QPPP  H  HGSVGPVI VLAVISILGVIAG+IGRLC GRPVFGY AHYDV++WV+KKCASCLDGSLD  PPP  LR P  PPL+AV V E 
Subjt:  MSFPVDQFQPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPL-LRPPPTPPLEAVTVAE-

Query:  ---PPETKQGGD--AENLQSVPPGSGG
           PPE KQG D   ENLQS  PG+GG
Subjt:  ---PPETKQGGD--AENLQSVPPGSGG
A0A6J1JMK0 uncharacterized protein LOC1114865674.2e-4172.93Show/hide
Query:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA
        MS P+DQ QPPP   A+HPA GSVGPVI VLAVISILG IAG+IGR+CFGRPVFGY AHYDV+DWV+KKCA+CLDGSLD  PPPLLRPP  PP+EA+ VA
Subjt:  MSFPVDQFQPPP---AVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVA

Query:  E----PPETKQGGDA----ENLQSVPPGSGGES
        E    PP  K+ GD     ENLQSVPPGSGGES
Subjt:  E----PPETKQGGDA----ENLQSVPPGSGGES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein1.2e-1133.85Show/hide
Query:  FQPPPAVHPAHGS----------VGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSL-DQLPPPLLRPPPTPPLEAVT-
        +QPPPA   +  S          +GP I V  V+++L V+A VIGRLC G+ + GY   YD++ W + +C SC+DG +    P P   PPP  PL   + 
Subjt:  FQPPPAVHPAHGS----------VGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSL-DQLPPPLLRPPPTPPLEAVT-

Query:  ---------VAEPPETKQGGDAENLQSVPP
                 VA+      G   ++L   PP
Subjt:  ---------VAEPPETKQGGDAENLQSVPP
AT3G57500.1 unknown protein4.5e-1137.5Show/hide
Query:  QPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVAEPPETKQ
        Q  P+ +  H S+  ++ VLAVI+IL V+AGV  RLC GR +  +   +D++ WV++KC SC+D  +  +      PPP PP  A   ++P   +Q
Subjt:  QPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVAEPPETKQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTTCCGGTCGACCAGTTCCAGCCGCCGCCGGCCGTCCATCCGGCCCACGGCTCGGTCGGACCGGTCATCGGCGTCCTCGCCGTGATCTCCATCCTCGGCGTCAT
TGCCGGCGTCATCGGCCGCCTCTGCTTCGGCCGCCCCGTCTTCGGCTACGCCGCCCACTACGACGTCGATGATTGGGTCCAGAAGAAATGTGCTTCCTGCCTCGACGGCT
CCCTCGACCAACTGCCGCCGCCTCTCCTCCGTCCGCCGCCGACGCCGCCGCTCGAAGCTGTTACTGTGGCGGAGCCGCCGGAGACCAAGCAAGGCGGCGATGCCGAGAAT
TTACAGTCGGTGCCTCCCGGAAGCGGCGGTGAGTCGTGA
mRNA sequenceShow/hide mRNA sequence
CCACACCAGGGTAAGTGTGCTTTCACTTGTCGTCCACTTCGCTTCCGTCATCTCTGAACCATATGTCTGTTTTTATATAAACCCCAAAAATAAATTATAAAAAAAAAAAA
CTTCAAAAATAAATCTCCCAAAATCCCTATTCAGCTCCGCTCCGCTCCTCCGCCGCCGCTACACAAATTTTGAATTCCCTCCCATGTCCTTTCCGGTCGACCAGTTCCAG
CCGCCGCCGGCCGTCCATCCGGCCCACGGCTCGGTCGGACCGGTCATCGGCGTCCTCGCCGTGATCTCCATCCTCGGCGTCATTGCCGGCGTCATCGGCCGCCTCTGCTT
CGGCCGCCCCGTCTTCGGCTACGCCGCCCACTACGACGTCGATGATTGGGTCCAGAAGAAATGTGCTTCCTGCCTCGACGGCTCCCTCGACCAACTGCCGCCGCCTCTCC
TCCGTCCGCCGCCGACGCCGCCGCTCGAAGCTGTTACTGTGGCGGAGCCGCCGGAGACCAAGCAAGGCGGCGATGCCGAGAATTTACAGTCGGTGCCTCCCGGAAGCGGC
GGTGAGTCGTGAAATTTCGTTTCATTTTTGAAAGAGTAAAGTTTTTTTTTTTTTTTTTGTTGTTGTGGGGATTCTAAAATCTATTTTTGGGGGTTTAATTTTTATTCTTT
TATATATTTATCTGGTGGATGAATGACTATTTTGG
Protein sequenceShow/hide protein sequence
MSFPVDQFQPPPAVHPAHGSVGPVIGVLAVISILGVIAGVIGRLCFGRPVFGYAAHYDVDDWVQKKCASCLDGSLDQLPPPLLRPPPTPPLEAVTVAEPPETKQGGDAEN
LQSVPPGSGGES