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Sed0010508 (gene) of Chayote v1 genome

Gene IDSed0010508
OrganismSechium edule (Chayote v1)
Descriptionprotein BIC1-like
Genome locationLG10:13742030..13742766
RNA-Seq ExpressionSed0010508
SyntenySed0010508
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027199.1 Protein BIC1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-3976.86Show/hide
Query:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT
        M L   PLKPTS +LP +QESD KSDDQ L    +  EE+GLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSG+V+ARRALAREAKR+
Subjt:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT

Query:  SPNNNS---TATAGALTVLNS
        SPNNNS   +A AGAL +LNS
Subjt:  SPNNNS---TATAGALTVLNS
XP_022962648.1 protein BIC1-like [Cucurbita moschata]1.6e-3976.86Show/hide
Query:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT
        M L   PLKPTS +LP +QESD KSDDQ L    +  EE+GLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSG+V+ARRALAREAKR+
Subjt:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT

Query:  SPNNNS---TATAGALTVLNS
        SPNNNS   +ATAG+L +LNS
Subjt:  SPNNNS---TATAGALTVLNS
XP_022972606.1 protein BIC1-like [Cucurbita maxima]7.2e-4077.69Show/hide
Query:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT
        M L   PLKPTS +LP +QESD KSDDQ L    + AEE+GLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSG+V ARRALAREAKR+
Subjt:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT

Query:  SPNNNS---TATAGALTVLNS
        SPNNNS   +A AGAL +LNS
Subjt:  SPNNNS---TATAGALTVLNS
XP_023518112.1 protein BIC1-like [Cucurbita pepo subsp. pepo]4.2e-4077.69Show/hide
Query:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT
        M L   PLKPTS +LP +QESD KSDDQ L    + AEE+GLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSG+V+ARRALAREAKR+
Subjt:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT

Query:  SPNNNS---TATAGALTVLNS
        SPNNNS   +A AGAL +LNS
Subjt:  SPNNNS---TATAGALTVLNS
XP_038882952.1 protein BIC2-like [Benincasa hispida]4.7e-3167.69Show/hide
Query:  MTLQNPPLKPTSSILPHS--QESDLK--SDDQS-LDT--AAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRAL
        MTL +P  KP S +  H   QESD     D Q+ LDT  +A+  EESG ERLKRHRVAVAGQVWIP+KWGKEE LKDWIDGSAFEASLFPSG+V+ARRAL
Subjt:  MTLQNPPLKPTSSILPHS--QESDLK--SDDQS-LDT--AAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRAL

Query:  AREAKRTSPNNNSTAT-----AGALTVLNS
        AR+AKR SPNNN+ AT     AGAL +LNS
Subjt:  AREAKRTSPNNNSTAT-----AGALTVLNS
TrEMBL top hitse value%identityAlignment
A0A0A0KFC4 Uncharacterized protein2.4e-2860.47Show/hide
Query:  MTLQNPPLKPTSSIL----PHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALARE
        MTL +P   P SS+     PH QESD    +        E +ES  ERLKRHR+AVAG VWIP+KWGKEE LKDWIDGSAFEASLF SG+V+AR ALAR+
Subjt:  MTLQNPPLKPTSSIL----PHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALARE

Query:  AKRTSPNNN-------STATAGALTVLNS
        AKR SPNNN       +TA AGAL +LNS
Subjt:  AKRTSPNNN-------STATAGALTVLNS
A0A5D3C697 Protein BIC1 isoform X12.1e-2962.5Show/hide
Query:  MTLQNPPLKPTSSI-LPHSQESDLKSDDQSLD----TAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAR
        MTL +P   P SS+ LPH     L+  DQ+L        +E  ES  ERLKRHR+AVAG VWIP+KWGKEE LKDWIDGSAFEASLFPSG+V+AR ALAR
Subjt:  MTLQNPPLKPTSSI-LPHSQESDLKSDDQSLD----TAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAR

Query:  EAKRTSPNNN-----STATAGALTVLNS
        +AKR SPNNN     +TA AGAL +LNS
Subjt:  EAKRTSPNNN-----STATAGALTVLNS
A0A5N5I036 Uncharacterized protein3.1e-2071.23Show/hide
Query:  DQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKR
        DQ    AA E EESGLERLK+HR+ VAGQVWIPE WG+EELL+DWID SAF+ASLFPSG++TAR AL  E +R
Subjt:  DQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKR
A0A6J1HFE1 protein BIC1-like7.8e-4076.86Show/hide
Query:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT
        M L   PLKPTS +LP +QESD KSDDQ L    +  EE+GLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSG+V+ARRALAREAKR+
Subjt:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT

Query:  SPNNNS---TATAGALTVLNS
        SPNNNS   +ATAG+L +LNS
Subjt:  SPNNNS---TATAGALTVLNS
A0A6J1I6F1 protein BIC1-like3.5e-4077.69Show/hide
Query:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT
        M L   PLKPTS +LP +QESD KSDDQ L    + AEE+GLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSG+V ARRALAREAKR+
Subjt:  MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRT

Query:  SPNNNS---TATAGALTVLNS
        SPNNNS   +A AGAL +LNS
Subjt:  SPNNNS---TATAGALTVLNS
SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC12.2e-1545.71Show/hide
Query:  TLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEE-----SGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALARE
        T Q+PP  P  +    S  S  K D   L+    +++E     +G ERLK+HR  +AG+VWIPE WG+EELLKDWID S F+  L P+G+ +AR AL  E
Subjt:  TLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEE-----SGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALARE

Query:  AKRTS
        A+R +
Subjt:  AKRTS
Q9M280 Protein BIC21.1e-0953.45Show/hide
Query:  SGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREA
        SG +RLKRHR  VAG+V IP+ WGKE LL  W+D S F+A+   S +V+AR AL  ++
Subjt:  SGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREA
Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein7.5e-1153.45Show/hide
Query:  SGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREA
        SG +RLKRHR  VAG+V IP+ WGKE LL  W+D S F+A+   S +V+AR AL  ++
Subjt:  SGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREA
AT3G52740.1 unknown protein1.6e-1645.71Show/hide
Query:  TLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEE-----SGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALARE
        T Q+PP  P  +    S  S  K D   L+    +++E     +G ERLK+HR  +AG+VWIPE WG+EELLKDWID S F+  L P+G+ +AR AL  E
Subjt:  TLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEE-----SGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALARE

Query:  AKRTS
        A+R +
Subjt:  AKRTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTCCAAAACCCCCCTCTCAAACCCACTTCATCAATTTTACCACATAGCCAAGAATCAGATCTAAAGAGCGATGATCAGAGCCTTGACACTGCCGCCGTGGAGGC
AGAGGAGAGCGGGCTGGAGCGGCTAAAGCGCCACCGGGTGGCGGTGGCGGGGCAGGTTTGGATCCCGGAGAAATGGGGGAAGGAGGAGCTTTTGAAGGATTGGATCGACG
GCTCCGCATTTGAAGCTTCTCTGTTTCCTTCTGGGGTTGTAACGGCTCGCCGGGCTTTGGCCCGAGAAGCTAAGAGAACGTCGCCAAATAACAACTCTACCGCCACCGCC
GGAGCTTTGACAGTATTGAACAGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATAAAACATAAATCTCTTCAAACTCTCAATAACCAAACCTCCAACCCTAAAATCTCCATTTTTTCCATTTTGCAACAAACCCACATCCCAAATCTTCATAAAGCTTCAAT
CTTTACCAAAACCCACAAGAAATAATGACTCTCCAAAACCCCCCTCTCAAACCCACTTCATCAATTTTACCACATAGCCAAGAATCAGATCTAAAGAGCGATGATCAGAG
CCTTGACACTGCCGCCGTGGAGGCAGAGGAGAGCGGGCTGGAGCGGCTAAAGCGCCACCGGGTGGCGGTGGCGGGGCAGGTTTGGATCCCGGAGAAATGGGGGAAGGAGG
AGCTTTTGAAGGATTGGATCGACGGCTCCGCATTTGAAGCTTCTCTGTTTCCTTCTGGGGTTGTAACGGCTCGCCGGGCTTTGGCCCGAGAAGCTAAGAGAACGTCGCCA
AATAACAACTCTACCGCCACCGCCGGAGCTTTGACAGTATTGAACAGTTGGTGAATATATGTATACTACTAAGTAAGTGGTGGGTTTTTGTTTTGACTTTTTTTAATAAA
TATGGTGGTTTGTGTATTGTAATGTTTGTGAAAATATATTGAAATAATTATACTATCTCTAGATTGGATCCAGTCAAACTGATCTCTCCTTTGAAGATCTATGTCTCATC
TTAAAAAAAATGTTTGAAAGATTTTATTATTATATTCCTCTTTAATTTTGATATAATACATGTTTTTTTTTCCTTCA
Protein sequenceShow/hide protein sequence
MTLQNPPLKPTSSILPHSQESDLKSDDQSLDTAAVEAEESGLERLKRHRVAVAGQVWIPEKWGKEELLKDWIDGSAFEASLFPSGVVTARRALAREAKRTSPNNNSTATA
GALTVLNSW