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Sed0010517 (gene) of Chayote v1 genome

Gene IDSed0010517
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:21455547..21458614
RNA-Seq ExpressionSed0010517
SyntenySed0010517
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466545.1 PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo]1.1e-4671.53Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP---RCEEMKVEFGGNLQRSRSLPPFN-------------NLDNPNKNA
        MGSLMAGW+SP +D +EVS RRNKSLTKEEIEAFWK KK+VHEEHLRAILSP     E+ K   G NLQRS S+PPFN             NL+ P KN 
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP---RCEEMKVEFGGNLQRSRSLPPFN-------------NLDNPNKNA

Query:  WWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
        WWRRSNWAFLNEPP TEGSGNSYVSQFHVANMAASRLG GGV+A
Subjt:  WWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
XP_022940046.1 uncharacterized protein LOC111445795 [Cucurbita moschata]9.2e-4976.55Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN
        MGSLMAGW+SPASD EEVS RRNKSLTKEEIEAFWK KK++HEEHLRAILSP   CEE+ KVEFGG NLQRS S+PPFN            +LDN P KN
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN

Query:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
         WWRRSNWAFLNEPPV EGSGNSYVSQFHVAN+AASRLG GGV A
Subjt:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
XP_022982140.1 uncharacterized protein LOC111481065 [Cucurbita maxima]9.2e-4976.55Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN
        MGSLMAGW+SPASD EEVS RRNKSLTKEEIEAFWK KK++HEEHLRAILSP   CEE+ KVEFGG NLQRS S+PPFN            +LDN P KN
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN

Query:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
         WWRRSNWAFLNEPPV EGSGNSYVSQFHVAN+AASRLG GGV A
Subjt:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
XP_023525160.1 uncharacterized protein LOC111788844 [Cucurbita pepo subsp. pepo]2.7e-4875.86Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN
        MGSLMAGW+SPASD EEVS RRNKSLTKEEIEAFWK KK++HEEHLRAILSP   CEE+ KVEFGG NLQRS S+PPFN             LDN P KN
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN

Query:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
         WWRRSNWAFLNEPPV EGSGNSYVSQFHVAN++ASRLG GGV A
Subjt:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
XP_038898962.1 uncharacterized protein LOC120086405 [Benincasa hispida]1.1e-4976.06Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEMKVEFGGNLQRSRSLPPF------------NNLDNPNKNAWW
        MGSLMAGW+SPA+D +EVS RRNKSLTKEEIEAFWK KK+VHEEHLRAILSP    EE K+E GGNLQRS SLPPF             NL+ P KNAWW
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEMKVEFGGNLQRSRSLPPF------------NNLDNPNKNAWW

Query:  RRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
        RRSNWAFLNEPP TEGSGNSYVSQFHVANMAASRLG GGV+A
Subjt:  RRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
TrEMBL top hitse value%identityAlignment
A0A0A0LDC2 Uncharacterized protein5.4e-4771.53Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP---RCEEMKVEFGGNLQRSRSLPPFN-------------NLDNPNKNA
        MGSLMAGW+SP +D +EVS RRNKSLTKEEIEAFWK KK+VHEEHLRAILSP     E+ K   G NLQRS S+PPFN             NL+ P KN 
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP---RCEEMKVEFGGNLQRSRSLPPFN-------------NLDNPNKNA

Query:  WWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
        WWRRSNWAFLNEPP TEGSGNSYVSQFHVANMAASRLG GGV+A
Subjt:  WWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
A0A1S3CST6 uncharacterized protein LOC1035039305.4e-4771.53Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP---RCEEMKVEFGGNLQRSRSLPPFN-------------NLDNPNKNA
        MGSLMAGW+SP +D +EVS RRNKSLTKEEIEAFWK KK+VHEEHLRAILSP     E+ K   G NLQRS S+PPFN             NL+ P KN 
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP---RCEEMKVEFGGNLQRSRSLPPFN-------------NLDNPNKNA

Query:  WWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
        WWRRSNWAFLNEPP TEGSGNSYVSQFHVANMAASRLG GGV+A
Subjt:  WWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
A0A5D3D820 Putative DNA polymerase epsilon catalytic subunit A5.4e-4771.53Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP---RCEEMKVEFGGNLQRSRSLPPFN-------------NLDNPNKNA
        MGSLMAGW+SP +D +EVS RRNKSLTKEEIEAFWK KK+VHEEHLRAILSP     E+ K   G NLQRS S+PPFN             NL+ P KN 
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP---RCEEMKVEFGGNLQRSRSLPPFN-------------NLDNPNKNA

Query:  WWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
        WWRRSNWAFLNEPP TEGSGNSYVSQFHVANMAASRLG GGV+A
Subjt:  WWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
A0A6J1FHE8 uncharacterized protein LOC1114457954.4e-4976.55Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN
        MGSLMAGW+SPASD EEVS RRNKSLTKEEIEAFWK KK++HEEHLRAILSP   CEE+ KVEFGG NLQRS S+PPFN            +LDN P KN
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN

Query:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
         WWRRSNWAFLNEPPV EGSGNSYVSQFHVAN+AASRLG GGV A
Subjt:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
A0A6J1J1T2 uncharacterized protein LOC1114810654.4e-4976.55Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN
        MGSLMAGW+SPASD EEVS RRNKSLTKEEIEAFWK KK++HEEHLRAILSP   CEE+ KVEFGG NLQRS S+PPFN            +LDN P KN
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSP--RCEEM-KVEFGG-NLQRSRSLPPFN------------NLDN-PNKN

Query:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
         WWRRSNWAFLNEPPV EGSGNSYVSQFHVAN+AASRLG GGV A
Subjt:  AWWRRSNWAFLNEPPVTEGSGNSYVSQFHVANMAASRLGHGGVNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein3.1e-1844.54Show/hide
Query:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKE-VHEEHLRAILSPRCEEMKVEFGGNLQRSRSLPPFNNLDNPNKNA-WWRRSNWAFLNEPP
        MGSLM+GW+S   D + V  RR KSLT+EEI+ FWK KK+   EEH++A       ++  + G   Q        +  +N +K++ WWR++ WAFLNEP 
Subjt:  MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKE-VHEEHLRAILSPRCEEMKVEFGGNLQRSRSLPPFNNLDNPNKNA-WWRRSNWAFLNEPP

Query:  VTEGSGNSYVSQFHVANMA
          EG  N+YVSQF VA++A
Subjt:  VTEGSGNSYVSQFHVANMA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTAATGGCTGGTTGGAACTCCCCCGCGAGTGACTCAGAAGAAGTGAGTGAGAGGAGGAACAAGTCATTGACAAAAGAAGAAATTGAAGCTTTTTGGAAAAT
GAAGAAAGAAGTGCATGAAGAACATCTAAGAGCCATTTTGAGTCCTAGATGTGAGGAAATGAAGGTGGAGTTTGGTGGAAATCTTCAGAGATCAAGATCTCTGCCTCCAT
TTAATAACTTGGACAACCCCAACAAAAATGCCTGGTGGAGAAGAAGTAACTGGGCGTTTCTAAACGAACCGCCGGTGACGGAAGGATCTGGTAACAGTTACGTGTCGCAG
TTCCACGTGGCCAATATGGCGGCTTCCAGACTTGGTCATGGTGGCGTCAACGCTTGA
mRNA sequenceShow/hide mRNA sequence
AAATAAAAGAAGATTAACATAAAGTTATAGATAAGATCGGAGCCAAGAGATAAGGACATACACGGCTAAGCTTAGACTCCAACTTGGTGTATAAATATTATTTTCTCTTT
GTACAAAAAAACCATATTAATTATATCATATGATCTGATCATCAACAATTTGAAGAAAAAGTTTGAATTTTGAAACATGGGTTCTTTAATGGCTGGTTGGAACTCCCCCG
CGAGTGACTCAGAAGAAGTGAGTGAGAGGAGGAACAAGTCATTGACAAAAGAAGAAATTGAAGCTTTTTGGAAAATGAAGAAAGAAGTGCATGAAGAACATCTAAGAGCC
ATTTTGAGTCCTAGATGTGAGGAAATGAAGGTGGAGTTTGGTGGAAATCTTCAGAGATCAAGATCTCTGCCTCCATTTAATAACTTGGACAACCCCAACAAAAATGCCTG
GTGGAGAAGAAGTAACTGGGCGTTTCTAAACGAACCGCCGGTGACGGAAGGATCTGGTAACAGTTACGTGTCGCAGTTCCACGTGGCCAATATGGCGGCTTCCAGACTTG
GTCATGGTGGCGTCAACGCTTGAGAAACTCGGTTGAATTTCTTCGTTGTTTCGGTGTGTCGGTGATCCAATGTAGTGATTGTGAAGAGACAAAAGAATTTGTAAATTTGT
AAATTAGTTGATATGAGGTTTTCTGAATTTCAGTTGCGCACAGTTTATAAATTAATTATGTAATACGATTGTTATTTATCATAAATAGTTTTAGTTTTTTTTAATGTATA
TATTAGGTGTGATTTTGGTTTTTGTCTGTTTTATACTAAATCAATAATCGAATCAATATGTTTATAAATTTTTTTAATCAAATGCAATCAAAGATAGGTTCTTTTTTAAA
TTTCTAAATAAATGTACTATTTATTATTTATTTTTTCTGTTAGTTTTTATGACAAATGGTTATTCATCTATTATCACGAATTTACAAATACTACACATGATATAGAGAAT
TAGGAAGAGTCCATCAAAATTGGACTTTTTTCTTAATTTCTTTTTTTAGTAAGGACTAAAATGGCTTGTCCAATGGATGGGAAAAAAGTCATGAGAATGTATGGAAAGAA
CATCCACATATCACAAACCACAACCTCATAAAACCCTTGAAATTGACTCCTCTCAACCATACTCTACCTTTCTTCCAAGAGTCTTCACACAATTAATTACCAATTTCAGA
GGCAAGTCAAATCATACAACAAGCCAGACACAAATTACCCATTTGTTATATGAAATTCATCATATGCCCAAATAATTCTACAAGGCATTATTCAAAAGCAA
Protein sequenceShow/hide protein sequence
MGSLMAGWNSPASDSEEVSERRNKSLTKEEIEAFWKMKKEVHEEHLRAILSPRCEEMKVEFGGNLQRSRSLPPFNNLDNPNKNAWWRRSNWAFLNEPPVTEGSGNSYVSQ
FHVANMAASRLGHGGVNA